RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W ESP1Q03018 1630 aa4.2□□□□□ -1.74
PTI1YGR156W APN1P22936 367 aa4.19□□□□□ -1.74
PTI1YGR156W DPB3P27344 201 aa4.19□□□□□ -1.74
PTI1YGR156W YKL133CP36066 463 aa4.19□□□□□ -1.74
PTI1YGR156W AKL1P38080 1108 aaKnown RBP4.19□□□□□ -1.74
PTI1YGR156W PUS4P48567 403 aaKnown RBP4.19□□□□□ -1.74
PTI1YGR156W MPS1P54199 764 aa4.19□□□□□ -1.74
PTI1YGR156W PTA1Q01329 785 aaPredicted RBP4.19□□□□□ -1.74
PTI1YGR156W YHM2Q04013 314 aa4.19□□□□□ -1.74
PTI1YGR156W ECM16Q04217 1267 aaKnown RBP4.19□□□□□ -1.74
PTI1YGR156W THI22Q06490 572 aa4.19□□□□□ -1.74
PTI1YGR156W CHS5Q12114 671 aaKnown RBP4.19□□□□□ -1.74
PTI1YGR156W MDM20Q12387 796 aaKnown RBP4.19□□□□□ -1.74
PTI1YGR156W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
PTI1YGR156W ECM3Q99252 613 aa4.19□□□□□ -1.74
PTI1YGR156W MSS18P08593 268 aa4.18□□□□□ -1.74
PTI1YGR156W YEF3P16521 1044 aaKnown RBP4.18□□□□□ -1.74
PTI1YGR156W ATP12P22135 325 aa4.18□□□□□ -1.74
PTI1YGR156W SEC15P22224 910 aa4.18□□□□□ -1.74
PTI1YGR156W SEC65P29478 273 aa4.18□□□□□ -1.74
PTI1YGR156W YMC1P32331 307 aa4.18□□□□□ -1.74
PTI1YGR156W NTH1P32356 751 aa4.18□□□□□ -1.74
PTI1YGR156W YHL041WP38730 149 aa4.18□□□□□ -1.74
PTI1YGR156W NMA2P53204 395 aa4.18□□□□□ -1.74
PTI1YGR156W PAP2P53632 584 aaKnown RBP4.18□□□□□ -1.74
PTI1YGR156W LEE1Q02799 301 aaKnown RBP4.18□□□□□ -1.74
PTI1YGR156W ULA1Q12059 462 aa4.18□□□□□ -1.74
PTI1YGR156W YPR027CQ12079 277 aa4.18□□□□□ -1.74
PTI1YGR156W NKP1Q12493 238 aa4.18□□□□□ -1.74
PTI1YGR156W BNI1P41832 1953 aa4.17□□□□□ -1.74
PTI1YGR156W PHO5P00635 467 aa4.17□□□□□ -1.74
PTI1YGR156W CDC26P14724 124 aa4.17□□□□□ -1.74
PTI1YGR156W HOP1P20050 605 aa4.17□□□□□ -1.74
PTI1YGR156W APN2P38207 520 aa4.17□□□□□ -1.74
PTI1YGR156W RIM4P38741 713 aa4.17□□□□□ -1.74
PTI1YGR156W YHR097CP38809 366 aaKnown RBP4.17□□□□□ -1.74
PTI1YGR156W IRC5P43610 853 aa4.17□□□□□ -1.74
PTI1YGR156W TAX4P47030 604 aa4.17□□□□□ -1.74
PTI1YGR156W ASN1P49089 572 aaKnown RBP4.17□□□□□ -1.74
PTI1YGR156W CEG1Q01159 459 aaPredicted RBP4.17□□□□□ -1.74
PTI1YGR156W YSH1Q06224 779 aaPredicted RBP4.17□□□□□ -1.74
PTI1YGR156W BRE1Q07457 700 aaKnown RBP4.17□□□□□ -1.74
PTI1YGR156W PSR2Q07949 397 aa4.17□□□□□ -1.74
PTI1YGR156W LAM4P38800 1345 aa4.17□□□□□ -1.74
PTI1YGR156W DRS2P39524 1355 aa4.16□□□□□ -1.74
PTI1YGR156W TOP2P06786 1428 aaKnown RBP4.16□□□□□ -1.74
PTI1YGR156W YKU70P32807 602 aa4.16□□□□□ -1.74
PTI1YGR156W YPT7P32939 208 aa4.16□□□□□ -1.74
PTI1YGR156W CTP1P38152 299 aa4.16□□□□□ -1.74
PTI1YGR156W YNL195CP40168 261 aa4.16□□□□□ -1.74
PTI1YGR156W HIS6P40545 261 aa4.16□□□□□ -1.74
PTI1YGR156W QRI7P43122 407 aa4.16□□□□□ -1.74
PTI1YGR156W IES1P43579 692 aa4.16□□□□□ -1.74
PTI1YGR156W SET2P46995 733 aaKnown RBP4.16□□□□□ -1.74
PTI1YGR156W MPS3P47069 682 aa4.16□□□□□ -1.74
PTI1YGR156W ECM38Q05902 660 aaPredicted RBP4.16□□□□□ -1.74
PTI1YGR156W MMS1Q06211 1407 aa4.15□□□□□ -1.74
PTI1YGR156W ACO1P19414 778 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
PTI1YGR156W FEN2P25621 512 aaKnown RBP4.15□□□□□ -1.75
PTI1YGR156W YUR1P26725 428 aa4.15□□□□□ -1.75
PTI1YGR156W MF(ALPHA)2P32435 120 aa4.15□□□□□ -1.75
PTI1YGR156W ACA1P39970 489 aa4.15□□□□□ -1.75
PTI1YGR156W MIT1P40002 666 aa4.15□□□□□ -1.75
PTI1YGR156W KHA1P40309 873 aa4.15□□□□□ -1.75
PTI1YGR156W PMT6P42934 759 aa4.15□□□□□ -1.75
PTI1YGR156W RNR4P49723 345 aaKnown RBP4.15□□□□□ -1.75
PTI1YGR156W NOP15P53927 220 aaPredicted RBP4.15□□□□□ -1.75
PTI1YGR156W NGL2Q03264 515 aaKnown RBP4.15□□□□□ -1.75
PTI1YGR156W TRM732Q03496 1420 aa4.14□□□□□ -1.75
PTI1YGR156W APA1P16550 321 aaKnown RBP4.14□□□□□ -1.75
PTI1YGR156W PTH2P34222 208 aa4.14□□□□□ -1.75
PTI1YGR156W RPT2P40327 437 aaKnown RBP4.14□□□□□ -1.75
PTI1YGR156W DIP5P53388 608 aa4.14□□□□□ -1.75
PTI1YGR156W GPD1Q00055 391 aaKnown RBP4.14□□□□□ -1.75
PTI1YGR156W CIA1Q05583 330 aa4.14□□□□□ -1.75
PTI1YGR156W YLR407WQ06070 228 aa4.14□□□□□ -1.75
PTI1YGR156W ORM2Q06144 216 aa4.14□□□□□ -1.75
PTI1YGR156W TPK2P06245 380 aa4.13□□□□□ -1.75
PTI1YGR156W IME1P21190 360 aa4.13□□□□□ -1.75
PTI1YGR156W HXT4P32467 576 aa4.13□□□□□ -1.75
PTI1YGR156W PET309P32522 965 aaPredicted RBP4.13□□□□□ -1.75
PTI1YGR156W EXO84P38261 753 aa4.13□□□□□ -1.75
PTI1YGR156W SRP68P38687 599 aaKnown RBP4.13□□□□□ -1.75
PTI1YGR156W YHR202WP38887 602 aa4.13□□□□□ -1.75
PTI1YGR156W VID28P40547 921 aa4.13□□□□□ -1.75
PTI1YGR156W STB2P46679 850 aa4.13□□□□□ -1.75
PTI1YGR156W HLR1Q04429 423 aa4.13□□□□□ -1.75
PTI1YGR156W TMA64Q04600 565 aaKnown RBP4.13□□□□□ -1.75
PTI1YGR156W ISA1Q07821 250 aaPredicted RBP4.13□□□□□ -1.75
PTI1YGR156W RKI1Q12189 258 aa4.13□□□□□ -1.75
PTI1YGR156W POM34Q12445 299 aa4.13□□□□□ -1.75
PTI1YGR156W ERG20P08524 352 aaKnown RBP4.12□□□□□ -1.75
PTI1YGR156W DBF20P32328 564 aa4.12□□□□□ -1.75
PTI1YGR156W YIL077CP40508 320 aa4.12□□□□□ -1.75
PTI1YGR156W ULP2P40537 1034 aaPredicted RBP4.12□□□□□ -1.75
PTI1YGR156W RFX1P48743 811 aa4.12□□□□□ -1.75
PTI1YGR156W HOL1P53389 586 aa4.12□□□□□ -1.75
PTI1YGR156W MTD1Q02046 320 aaKnown RBP4.12□□□□□ -1.75
PTI1YGR156W UFO1Q04511 668 aa4.12□□□□□ -1.75
PTI1YGR156W YPS7Q06325 596 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 76 ms