RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 BTDP43251 543 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 MIGA1Q8NAN2 632 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 AIDAQ96BJ3 306 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 STRBPQ96SI9 672 aaKnown RBP14.8□□□□□ -0.04
LINC00339-213ENST00000642137 ESYT1Q9BSJ8 1104 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 ADARB2Q9NS39 739 aaKnown RBP14.8□□□□□ -0.04
LINC00339-213ENST00000642137 AATFQ9NY61 560 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC00339-213ENST00000642137 HACL1Q9UJ83 578 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 SCN4AP35499 1836 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 POTECB2RU33 542 aa14.79□□□□□ -0.04
LINC00339-213ENST00000642137 WNT10BO00744 389 aa14.79□□□□□ -0.04
LINC00339-213ENST00000642137 GPAA1O43292 621 aa14.79□□□□□ -0.04
LINC00339-213ENST00000642137 GNAT2P19087 354 aa14.79□□□□□ -0.04
LINC00339-213ENST00000642137 DYNLL1P63167 89 aaKnown RBP14.79□□□□□ -0.04
LINC00339-213ENST00000642137 RBM26Q5T8P6 1007 aaKnown RBP14.79□□□□□ -0.04
LINC00339-213ENST00000642137 SAMD7Q7Z3H4 446 aa14.79□□□□□ -0.04
LINC00339-213ENST00000642137 WDR90Q96KV7 1748 aa14.79□□□□□ -0.04
LINC00339-213ENST00000642137 USP40Q9NVE5 1235 aa14.79□□□□□ -0.04
LINC00339-213ENST00000642137 PCDHAC2Q9Y5I4 1007 aa14.79□□□□□ -0.04
LINC00339-213ENST00000642137 CCDC171Q6TFL3 1326 aa14.78□□□□□ -0.04
LINC00339-213ENST00000642137 PATL2C9JE40 543 aaKnown RBP14.78□□□□□ -0.04
LINC00339-213ENST00000642137 MYO1BO43795 1136 aa14.78□□□□□ -0.04
LINC00339-213ENST00000642137 MBD4O95243 580 aa14.78□□□□□ -0.04
LINC00339-213ENST00000642137 RHBDL3P58872 404 aa14.78□□□□□ -0.04
LINC00339-213ENST00000642137 KIF4BQ2VIQ3 1234 aa14.78□□□□□ -0.04
LINC00339-213ENST00000642137 CDC42EP5Q6NZY7 148 aa14.78□□□□□ -0.04
LINC00339-213ENST00000642137 USP50Q70EL3 339 aaPredicted RBP14.78□□□□□ -0.04
LINC00339-213ENST00000642137 LCORLQ8N3X6 602 aa14.78□□□□□ -0.04
LINC00339-213ENST00000642137 ARMT1Q9H993 441 aa14.78□□□□□ -0.04
LINC00339-213ENST00000642137 RPAP1Q9BWH6 1393 aaPredicted RBP14.77□□□□□ -0.04
LINC00339-213ENST00000642137 VEGFAP15692 232 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-213ENST00000642137 EPHX2P34913 555 aa14.77□□□□□ -0.05
LINC00339-213ENST00000642137 NBPF9Q3BBW0 867 aa14.77□□□□□ -0.05
LINC00339-213ENST00000642137 C8orf34Q49A92 452 aa14.77□□□□□ -0.05
LINC00339-213ENST00000642137 TBC1D10BQ4KMP7 808 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-213ENST00000642137 CCDC129Q6ZRS4 1044 aa14.77□□□□□ -0.05
LINC00339-213ENST00000642137 ZNF589Q86UQ0 364 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-213ENST00000642137 SH3RF3Q8TEJ3 882 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-213ENST00000642137 CRNKL1Q9BZJ0 848 aaKnown RBP14.77□□□□□ -0.05
LINC00339-213ENST00000642137 IL25Q9H293 177 aa14.77□□□□□ -0.05
LINC00339-213ENST00000642137 TDRD3Q9H7E2 651 aaKnown RBP14.77□□□□□ -0.05
LINC00339-213ENST00000642137 SLC4A4Q9Y6R1 1079 aa14.77□□□□□ -0.05
LINC00339-213ENST00000642137 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
LINC00339-213ENST00000642137 EGFRP00533 1210 aa14.76□□□□□ -0.05
LINC00339-213ENST00000642137 HIRAP54198 1017 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-213ENST00000642137 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
LINC00339-213ENST00000642137 FKBP1CQ5VVH2 108 aa14.76□□□□□ -0.05
LINC00339-213ENST00000642137 GIMAP6Q6P9H5 292 aa14.76□□□□□ -0.05
LINC00339-213ENST00000642137 KIAA1211Q6ZU35 1233 aa14.76□□□□□ -0.05
LINC00339-213ENST00000642137 PNMA8AQ86V59 439 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-213ENST00000642137 TEX11Q8IYF3 940 aa14.76□□□□□ -0.05
LINC00339-213ENST00000642137 IDI2Q9BXS1 227 aa14.76□□□□□ -0.05
LINC00339-213ENST00000642137 TAF1DQ9H5J8 278 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-213ENST00000642137 RRAGCQ9HB90 399 aa14.76□□□□□ -0.05
LINC00339-213ENST00000642137 ATP8A2Q9NTI2 1148 aa14.76□□□□□ -0.05
LINC00339-213ENST00000642137 ZNF70Q9UC06 446 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-213ENST00000642137 GSG1L2A8MUP6 293 aa14.75□□□□□ -0.05
LINC00339-213ENST00000642137 EPB41L2O43491 1005 aaKnown RBP14.75□□□□□ -0.05
LINC00339-213ENST00000642137 HSPD1P10809 573 aaKnown RBP14.75□□□□□ -0.05
LINC00339-213ENST00000642137 ALX1Q15699 326 aa14.75□□□□□ -0.05
LINC00339-213ENST00000642137 TRPM4Q8TD43 1214 aa14.75□□□□□ -0.05
LINC00339-213ENST00000642137 ZC3H15Q8WU90 426 aaKnown RBP14.75□□□□□ -0.05
LINC00339-213ENST00000642137 TGFBRAP1Q8WUH2 860 aa14.75□□□□□ -0.05
LINC00339-213ENST00000642137 DSCC1Q9BVC3 393 aa14.75□□□□□ -0.05
LINC00339-213ENST00000642137 TMOD2Q9NZR1 351 aa14.75□□□□□ -0.05
LINC00339-213ENST00000642137 ECM29Q5VYK3 1845 aa14.75□□□□□ -0.05
LINC00339-213ENST00000642137 ADAMTSL1Q8N6G6 1762 aa14.75□□□□□ -0.05
LINC00339-213ENST00000642137 PRKAB2O43741 272 aa14.74□□□□□ -0.05
LINC00339-213ENST00000642137 WDHD1O75717 1129 aaPredicted RBP14.74□□□□□ -0.05
LINC00339-213ENST00000642137 REC8O95072 547 aa14.74□□□□□ -0.05
LINC00339-213ENST00000642137 USP5P45974 858 aa14.74□□□□□ -0.05
LINC00339-213ENST00000642137 IFNL3Q8IZI9 196 aa14.74□□□□□ -0.05
LINC00339-213ENST00000642137 MAP4K1Q92918 833 aa14.74□□□□□ -0.05
LINC00339-213ENST00000642137 NACAP1Q9BZK3 213 aa14.74□□□□□ -0.05
LINC00339-213ENST00000642137 MKRN1Q9UHC7 482 aaKnown RBP14.74□□□□□ -0.05
LINC00339-213ENST00000642137 PGAP2Q9UHJ9 254 aa14.74□□□□□ -0.05
LINC00339-213ENST00000642137 CLRN2A0PK11 232 aa14.73□□□□□ -0.05
LINC00339-213ENST00000642137 ENTPD3O75355 529 aa14.73□□□□□ -0.05
LINC00339-213ENST00000642137 APPP05067 770 aa14.73□□□□□ -0.05
LINC00339-213ENST00000642137 PTH1RQ03431 593 aa14.73□□□□□ -0.05
LINC00339-213ENST00000642137 VPS53Q5VIR6 699 aa14.73□□□□□ -0.05
LINC00339-213ENST00000642137 SDR42E1Q8WUS8 393 aa14.73□□□□□ -0.05
LINC00339-213ENST00000642137 DDRGK1Q96HY6 314 aa14.73□□□□□ -0.05
LINC00339-213ENST00000642137 BACH2Q9BYV9 841 aa14.73□□□□□ -0.05
LINC00339-213ENST00000642137 LSG1Q9H089 658 aaKnown RBP14.73□□□□□ -0.05
LINC00339-213ENST00000642137 DCP1AQ9NPI6 582 aaPredicted RBP14.73□□□□□ -0.05
LINC00339-213ENST00000642137 CDK5RAP2Q96SN8 1893 aa14.73□□□□□ -0.05
LINC00339-213ENST00000642137 PITPNM2Q9BZ72 1349 aa14.72□□□□□ -0.05
LINC00339-213ENST00000642137 FOCADQ5VW36 1801 aa14.72□□□□□ -0.05
LINC00339-213ENST00000642137 FOXP2O15409 715 aa14.72□□□□□ -0.05
LINC00339-213ENST00000642137 FGAP02671 866 aa14.72□□□□□ -0.05
LINC00339-213ENST00000642137 TNNI2P48788 182 aa14.72□□□□□ -0.05
LINC00339-213ENST00000642137 TNFAIP1Q13829 316 aa14.72□□□□□ -0.05
LINC00339-213ENST00000642137 FAM83AQ86UY5 434 aa14.72□□□□□ -0.05
LINC00339-213ENST00000642137 ANO2Q9NQ90 1003 aa14.72□□□□□ -0.05
LINC00339-213ENST00000642137 FAM198AQ9UFP1 575 aa14.72□□□□□ -0.05
LINC00339-213ENST00000642137 UTRNP46939 3433 aa14.72□□□□□ -0.05
LINC00339-213ENST00000642137 POLR2AP24928 1970 aaKnown RBP14.71□□□□□ -0.05
LINC00339-213ENST00000642137 SEC24BO95487 1268 aa14.71□□□□□ -0.05
LINC00339-213ENST00000642137 NFIAQ12857 509 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms