RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TRDNQ13061 729 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 IFNL3Q8IZI9 196 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 KLHL34Q8N239 644 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 INTS4Q96HW7 963 aaKnown RBP10.47□□□□□ -0.73
PHGDH-219ENST00000641513 LRRC2Q9BYS8 371 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 AATFQ9NY61 560 aaKnown RBP eCLIP10.47□□□□□ -0.73
PHGDH-219ENST00000641513 NAP1L2Q9ULW6 460 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-219ENST00000641513 C10orf71Q711Q0 1435 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 TIAM2Q8IVF5 1701 aa10.47□□□□□ -0.73
PHGDH-219ENST00000641513 TCHHQ07283 1943 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 GSG1L2A8MUP6 293 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 MINDY4BA8MYZ0 360 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 LDHCP07864 332 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 GTF2IP78347 998 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 STK3Q13188 491 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 CUL4AQ13619 759 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 R3HDM1Q15032 1099 aaKnown RBP10.46□□□□□ -0.73
PHGDH-219ENST00000641513 ALX1Q15699 326 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 KLHL40Q2TBA0 621 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 DHX32Q7L7V1 743 aaKnown RBP10.46□□□□□ -0.73
PHGDH-219ENST00000641513 CHST3Q7LGC8 479 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 CCDC83Q8IWF9 413 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 STK11IPQ8N1F8 1099 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 NCOA7Q8NI08 942 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 SDR42E1Q8WUS8 393 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 COA1Q9GZY4 146 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 SH2B1Q9NRF2 756 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-219ENST00000641513 TOMM22Q9NS69 142 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 SALL1Q9NSC2 1324 aa10.46□□□□□ -0.73
PHGDH-219ENST00000641513 ADAMTSL1Q8N6G6 1762 aa10.46□□□□□ -0.74
PHGDH-219ENST00000641513 MYH6P13533 1939 aa10.46□□□□□ -0.74
PHGDH-219ENST00000641513 SCN9AQ15858 1988 aa10.46□□□□□ -0.74
PHGDH-219ENST00000641513 BRCA1P38398 1863 aaKnown RBP10.45□□□□□ -0.74
PHGDH-219ENST00000641513 PSME4Q14997 1843 aa10.45□□□□□ -0.74
PHGDH-219ENST00000641513 LARGE1O95461 756 aa10.45□□□□□ -0.74
PHGDH-219ENST00000641513 CTDSPL2Q05D32 466 aa10.45□□□□□ -0.74
PHGDH-219ENST00000641513 COL9A3Q14050 684 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-219ENST00000641513 TOB2Q14106 344 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-219ENST00000641513 MFSD14BQ5SR56 506 aa10.45□□□□□ -0.74
PHGDH-219ENST00000641513 NECAB1Q8N987 351 aa10.45□□□□□ -0.74
PHGDH-219ENST00000641513 TBC1D22AQ8WUA7 517 aa10.45□□□□□ -0.74
PHGDH-219ENST00000641513 BRF1Q92994 677 aa10.45□□□□□ -0.74
PHGDH-219ENST00000641513 CRNKL1Q9BZJ0 848 aaKnown RBP10.45□□□□□ -0.74
PHGDH-219ENST00000641513 ALDH8A1Q9H2A2 487 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-219ENST00000641513 EPB41L4AQ9HCS5 686 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-219ENST00000641513 PPP1R1BQ9UD71 204 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-219ENST00000641513 TPCN1Q9ULQ1 816 aa10.45□□□□□ -0.74
PHGDH-219ENST00000641513 SMC3Q9UQE7 1217 aa10.45□□□□□ -0.74
PHGDH-219ENST00000641513 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-219ENST00000641513 ZMYM6O95789 1325 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 F8W031 263 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-219ENST00000641513 ZBTB22O15209 634 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 PRC1O43663 620 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 C21orf2O43822 256 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 BAG4O95429 457 aaKnown RBP10.44□□□□□ -0.74
PHGDH-219ENST00000641513 BAG3O95817 575 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 DPEP1P16444 411 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 MCM5P33992 734 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 USP5P45974 858 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 DIXDC1Q155Q3 683 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 GRIK5Q16478 980 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 ME3Q16798 604 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 RRP12Q5JTH9 1297 aaKnown RBP10.44□□□□□ -0.74
PHGDH-219ENST00000641513 TMED8Q6PL24 325 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-219ENST00000641513 MFSD6Q6ZSS7 791 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 TBC1D10CQ8IV04 446 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 SLF2Q8IX21 1173 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 TTLL6Q8N841 843 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 SUPT20HQ8NEM7 779 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 ZNF384Q8TF68 577 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 RIOK1Q9BRS2 568 aaKnown RBP10.44□□□□□ -0.74
PHGDH-219ENST00000641513 MTFR1LQ9H019 292 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 DBNDD1Q9H9R9 158 aa10.44□□□□□ -0.74
PHGDH-219ENST00000641513 ZNF646O15015 1829 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-219ENST00000641513 MROH7-TTC4A0A0A0MT08 1334 aa10.43□□□□□ -0.74
PHGDH-219ENST00000641513 FAM205AQ6ZU69 1335 aa10.43□□□□□ -0.74
PHGDH-219ENST00000641513 PSDA5PKW4 1024 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-219ENST00000641513 B4E1Z4 1266 aa10.43□□□□□ -0.74
PHGDH-219ENST00000641513 EXOSC10Q01780 885 aaKnown RBP10.43□□□□□ -0.74
PHGDH-219ENST00000641513 APOBRQ0VD83 1088 aa10.43□□□□□ -0.74
PHGDH-219ENST00000641513 AKNAD1Q5T1N1 836 aa10.43□□□□□ -0.74
PHGDH-219ENST00000641513 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-219ENST00000641513 CC2D2BQ6DHV5 1058 aa10.43□□□□□ -0.74
PHGDH-219ENST00000641513 FOXD4L4Q8WXT5 416 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-219ENST00000641513 NBPF3Q9H094 633 aa10.43□□□□□ -0.74
PHGDH-219ENST00000641513 BRPF3Q9ULD4 1205 aa10.43□□□□□ -0.74
PHGDH-219ENST00000641513 MYH15Q9Y2K3 1946 aa10.43□□□□□ -0.74
PHGDH-219ENST00000641513 NEDD4P46934 1319 aa10.42□□□□□ -0.74
PHGDH-219ENST00000641513 ECE2O60344 883 aa10.42□□□□□ -0.74
PHGDH-219ENST00000641513 IGSF3O75054 1194 aa10.42□□□□□ -0.74
PHGDH-219ENST00000641513 PPARAQ07869 468 aa10.42□□□□□ -0.74
PHGDH-219ENST00000641513 CCDC93Q567U6 631 aa10.42□□□□□ -0.74
PHGDH-219ENST00000641513 MB21D2Q8IYB1 491 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-219ENST00000641513 SH3RF3Q8TEJ3 882 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-219ENST00000641513 KRT23Q9C075 422 aa10.42□□□□□ -0.74
PHGDH-219ENST00000641513 RNF41Q9H4P4 317 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-219ENST00000641513 CNNM2Q9H8M5 875 aa10.42□□□□□ -0.74
PHGDH-219ENST00000641513 INCENPQ9NQS7 918 aa10.42□□□□□ -0.74
PHGDH-219ENST00000641513 FER1L6Q2WGJ9 1857 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms