RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 SP4Q02446 784 aa22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 GPR161Q8N6U8 529 aaKnown RBP22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 PLCD1P51178 756 aa22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 VAMP4O75379 141 aa22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 PDE4DQ08499 809 aa22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 CYP26C1Q6V0L0 522 aa22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 SPOPO43791 374 aa22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 AGTPBP1Q9UPW5 1226 aa22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 MSH6P52701 1360 aa22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 MBD4O95243 580 aa22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 TBC1D8BQ0IIM8 1120 aa22.12■■□□□ 1.13
KCNMA1-293ENST00000640969 TNFAIP3P21580 790 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 PPP1R2P41236 205 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 C8orf74Q6P047 294 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 KIFAP3Q92845 792 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 ZBTB40Q9NUA8 1239 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 BACH1O14867 736 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 VWA3BQ502W6 1294 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 GBP6Q6ZN66 633 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 CCDC110Q8TBZ0 833 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 WDR44Q5JSH3 913 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 UTP14CQ5TAP6 766 aaKnown RBP22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 CADPS2Q86UW7 1296 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 ZRANB1Q9UGI0 708 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 RBSNQ9H1K0 784 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 PKD2L1Q9P0L9 805 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 JAG2Q9Y219 1238 aa22.11■■□□□ 1.13
KCNMA1-293ENST00000640969 LRRC59Q96AG4 307 aaKnown RBP22.1■■□□□ 1.13
KCNMA1-293ENST00000640969 TTF2Q9UNY4 1162 aaKnown RBP22.1■■□□□ 1.13
KCNMA1-293ENST00000640969 ERCC5P28715 1186 aaPredicted RBP22.1■■□□□ 1.13
KCNMA1-293ENST00000640969 NFATC2IPQ8NCF5 419 aa22.1■■□□□ 1.13
KCNMA1-293ENST00000640969 BIRC3Q13489 604 aa22.1■■□□□ 1.13
KCNMA1-293ENST00000640969 MAP3K5Q99683 1374 aa22.1■■□□□ 1.13
KCNMA1-293ENST00000640969 KRT24Q2M2I5 525 aa22.1■■□□□ 1.13
KCNMA1-293ENST00000640969 CSRNP2Q9H175 543 aa22.1■■□□□ 1.13
KCNMA1-293ENST00000640969 RASSF4Q9H2L5 321 aa22.1■■□□□ 1.13
KCNMA1-293ENST00000640969 CUL7Q14999 1698 aa22.1■■□□□ 1.13
KCNMA1-293ENST00000640969 RILPL1Q5EBL4 403 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 ANKRD2Q9GZV1 360 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 SEC24BO95487 1268 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 ASIC2Q16515 512 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 PPP1R21Q6ZMI0 780 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 RIMBP2O15034 1052 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 RNASE9P60153 205 aaKnown RBP22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 ATP11AP98196 1134 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 CNNM4Q6P4Q7 775 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 POLR3AO14802 1390 aaPredicted RBP22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 KRT9P35527 623 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 RASA3Q14644 834 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 FNBP1Q96RU3 617 aa22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 ZC3H12CQ9C0D7 883 aaKnown RBP22.09■■□□□ 1.13
KCNMA1-293ENST00000640969 FYB2Q5VWT5 728 aa22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 ANO1Q5XXA6 986 aa22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 IFT74Q96LB3 600 aa22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 SAP30BPQ9UHR5 308 aaKnown RBP22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 MRRFQ96E11 262 aaKnown RBP22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 UTP11Q9Y3A2 253 aaKnown RBP22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 SYNRGQ9UMZ2 1314 aa22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 GMNNO75496 209 aa22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 GAS8O95995 478 aa22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 CEP85LQ5SZL2 805 aa22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 B4GALNT4Q76KP1 1039 aa22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 KCNH3Q9ULD8 1083 aa22.08■■□□□ 1.13
KCNMA1-293ENST00000640969 NAA25Q14CX7 972 aa22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 CLUL1Q15846 466 aa22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 TPTE2Q6XPS3 522 aa22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 PIK3AP1Q6ZUJ8 805 aa22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 MKRN1Q9UHC7 482 aaKnown RBP22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 NSFL1CQ9UNZ2 370 aaKnown RBP22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 DENND4BO75064 1496 aaPredicted RBP22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 B4E1Z4 1266 aa22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 DEXIO95424 95 aa22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 RPUSD2Q8IZ73 545 aaKnown RBP22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 CLSTN2Q9H4D0 955 aa22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 FAM204AQ9H8W3 233 aa22.08■■□□□ 1.12
KCNMA1-293ENST00000640969 HARSP12081 509 aaKnown RBP22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 POLKQ9UBT6 870 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 SWAP70Q9UH65 585 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 E7EVH7 732 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 SEPT6Q14141 434 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 SLC27A2O14975 620 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 SH3BP5O60239 455 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 TUBB2AQ13885 445 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 CEP128Q6ZU80 1094 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 TUBB2BQ9BVA1 445 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 FANCAO15360 1455 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 FANCCQ00597 558 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 GPCPD1Q9NPB8 672 aa22.07■■□□□ 1.12
KCNMA1-293ENST00000640969 CALUO43852 315 aaPredicted RBP22.06■■□□□ 1.12
KCNMA1-293ENST00000640969 STX10O60499 249 aa22.06■■□□□ 1.12
KCNMA1-293ENST00000640969 RBM26Q5T8P6 1007 aaKnown RBP22.06■■□□□ 1.12
KCNMA1-293ENST00000640969 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
KCNMA1-293ENST00000640969 A0A1B0GUL7 405 aa22.06■■□□□ 1.12
KCNMA1-293ENST00000640969 ACTN4O43707 911 aaKnown RBP22.06■■□□□ 1.12
KCNMA1-293ENST00000640969 CCNT1O60563 726 aaKnown RBP22.06■■□□□ 1.12
KCNMA1-293ENST00000640969 PARD3Q8TEW0 1356 aa22.06■■□□□ 1.12
KCNMA1-293ENST00000640969 CHMP2AO43633 222 aa22.06■■□□□ 1.12
KCNMA1-293ENST00000640969 KIFC2Q96AC6 838 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms