RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 KIAA0825Q8IV33 1275 aa10.99□□□□□ -0.65
SCARB2-225ENST00000640900 SLF2Q8IX21 1173 aa10.99□□□□□ -0.65
SCARB2-225ENST00000640900 STRBPQ96SI9 672 aaKnown RBP10.99□□□□□ -0.65
SCARB2-225ENST00000640900 SEC62Q99442 399 aaKnown RBP10.99□□□□□ -0.65
SCARB2-225ENST00000640900 GPRC5DQ9NZD1 345 aa10.99□□□□□ -0.65
SCARB2-225ENST00000640900 MKRN1Q9UHC7 482 aaKnown RBP10.99□□□□□ -0.65
SCARB2-225ENST00000640900 SHTN1A0MZ66 631 aa10.98□□□□□ -0.65
SCARB2-225ENST00000640900 POTECB2RU33 542 aa10.98□□□□□ -0.65
SCARB2-225ENST00000640900 M0R2C6 588 aa10.98□□□□□ -0.65
SCARB2-225ENST00000640900 PITPNM1O00562 1244 aa10.98□□□□□ -0.65
SCARB2-225ENST00000640900 DDNO94850 711 aaPredicted RBP10.98□□□□□ -0.65
SCARB2-225ENST00000640900 CRKP46108 304 aa10.98□□□□□ -0.65
SCARB2-225ENST00000640900 CWC27Q6UX04 472 aaKnown RBP10.98□□□□□ -0.65
SCARB2-225ENST00000640900 ZNF589Q86UQ0 364 aaPredicted RBP10.98□□□□□ -0.65
SCARB2-225ENST00000640900 TEKT1Q969V4 418 aa10.98□□□□□ -0.65
SCARB2-225ENST00000640900 DIAPH3Q9NSV4 1193 aa10.98□□□□□ -0.65
SCARB2-225ENST00000640900 ADAMTSL1Q8N6G6 1762 aa10.98□□□□□ -0.65
SCARB2-225ENST00000640900 ALX1Q15699 326 aa10.97□□□□□ -0.65
SCARB2-225ENST00000640900 FKBP1CQ5VVH2 108 aa10.97□□□□□ -0.65
SCARB2-225ENST00000640900 RUFY2Q8WXA3 655 aa10.97□□□□□ -0.65
SCARB2-225ENST00000640900 FBXW7Q969H0 707 aa10.97□□□□□ -0.65
SCARB2-225ENST00000640900 PRMT6Q96LA8 375 aaPredicted RBP10.97□□□□□ -0.65
SCARB2-225ENST00000640900 BACH2Q9BYV9 841 aa10.97□□□□□ -0.65
SCARB2-225ENST00000640900 LSG1Q9H089 658 aaKnown RBP10.97□□□□□ -0.65
SCARB2-225ENST00000640900 CNOT7Q9UIV1 285 aaKnown RBP10.97□□□□□ -0.65
SCARB2-225ENST00000640900 PCDHAC2Q9Y5I4 1007 aa10.97□□□□□ -0.65
SCARB2-225ENST00000640900 CCDC171Q6TFL3 1326 aa10.97□□□□□ -0.65
SCARB2-225ENST00000640900 RPAP1Q9BWH6 1393 aaPredicted RBP10.97□□□□□ -0.65
SCARB2-225ENST00000640900 SCN4AP35499 1836 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 ZMYM6O95789 1325 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 MAGEB6P1A0A0J9YX57 407 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 F8W031 263 aaPredicted RBP10.96□□□□□ -0.65
SCARB2-225ENST00000640900 GPAA1O43292 621 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 MBD4O95243 580 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 EGFRP00533 1210 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 CFAP100Q494V2 611 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 CDC42EP5Q6NZY7 148 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 GIMAP6Q6P9H5 292 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 MICALL2Q8IY33 904 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 LCORLQ8N3X6 602 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 OGFOD1Q8N543 542 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 MAP4K1Q92918 833 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 DSCC1Q9BVC3 393 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 IDI2Q9BXS1 227 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 MYOZ2Q9NPC6 264 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 HDAC9Q9UKV0 1011 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 GJA3Q9Y6H8 435 aa10.96□□□□□ -0.65
SCARB2-225ENST00000640900 CDK5RAP2Q96SN8 1893 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 FOCADQ5VW36 1801 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 GSG1L2A8MUP6 293 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 WNT10BO00744 389 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 WDHD1O75717 1129 aaPredicted RBP10.95□□□□□ -0.66
SCARB2-225ENST00000640900 SEC24BO95487 1268 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 BAG3O95817 575 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 HSPD1P10809 573 aaKnown RBP10.95□□□□□ -0.66
SCARB2-225ENST00000640900 PLCG2P16885 1265 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 GNAT2P19087 354 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 EPS15P42566 896 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 BTDP43251 543 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 HIRAP54198 1017 aaPredicted RBP10.95□□□□□ -0.66
SCARB2-225ENST00000640900 DYNLL1P63167 89 aaKnown RBP10.95□□□□□ -0.66
SCARB2-225ENST00000640900 VPS53Q5VIR6 699 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 CASC1Q6TDU7 716 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 MIGA1Q8NAN2 632 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 KCNB2Q92953 911 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 IL17RAQ96F46 866 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 ARMT1Q9H993 441 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 AATFQ9NY61 560 aaKnown RBP eCLIP10.95□□□□□ -0.66
SCARB2-225ENST00000640900 PGAP2Q9UHJ9 254 aa10.95□□□□□ -0.66
SCARB2-225ENST00000640900 DDX60LQ5H9U9 1706 aaKnown RBP10.95□□□□□ -0.66
SCARB2-225ENST00000640900 COL2A1P02458 1487 aaPredicted RBP10.94□□□□□ -0.66
SCARB2-225ENST00000640900 ECM29Q5VYK3 1845 aa10.94□□□□□ -0.66
SCARB2-225ENST00000640900 PATL2C9JE40 543 aaKnown RBP10.94□□□□□ -0.66
SCARB2-225ENST00000640900 H7C1D1 291 aa10.94□□□□□ -0.66
SCARB2-225ENST00000640900 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
SCARB2-225ENST00000640900 PTH1RQ03431 593 aa10.94□□□□□ -0.66
SCARB2-225ENST00000640900 DLGAP5Q15398 846 aa10.94□□□□□ -0.66
SCARB2-225ENST00000640900 CHRDL2Q6WN34 429 aa10.94□□□□□ -0.66
SCARB2-225ENST00000640900 TRPM4Q8TD43 1214 aa10.94□□□□□ -0.66
SCARB2-225ENST00000640900 SH3RF3Q8TEJ3 882 aaPredicted RBP10.94□□□□□ -0.66
SCARB2-225ENST00000640900 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
SCARB2-225ENST00000640900 USP26Q9BXU7 913 aa10.94□□□□□ -0.66
SCARB2-225ENST00000640900 EPB41L4AQ9HCS5 686 aaPredicted RBP10.94□□□□□ -0.66
SCARB2-225ENST00000640900 ADARB2Q9NS39 739 aaKnown RBP10.94□□□□□ -0.66
SCARB2-225ENST00000640900 ATP8A2Q9NTI2 1148 aa10.94□□□□□ -0.66
SCARB2-225ENST00000640900 PRKAB2O43741 272 aa10.93□□□□□ -0.66
SCARB2-225ENST00000640900 EIF5BO60841 1220 aaKnown RBP10.93□□□□□ -0.66
SCARB2-225ENST00000640900 NECTIN1Q15223 517 aa10.93□□□□□ -0.66
SCARB2-225ENST00000640900 NBPF9Q3BBW0 867 aa10.93□□□□□ -0.66
SCARB2-225ENST00000640900 SAMD7Q7Z3H4 446 aa10.93□□□□□ -0.66
SCARB2-225ENST00000640900 CRNKL1Q9BZJ0 848 aaKnown RBP10.93□□□□□ -0.66
SCARB2-225ENST00000640900 DCP1AQ9NPI6 582 aaPredicted RBP10.93□□□□□ -0.66
SCARB2-225ENST00000640900 ZNF70Q9UC06 446 aaPredicted RBP10.93□□□□□ -0.66
SCARB2-225ENST00000640900 FAM198AQ9UFP1 575 aa10.93□□□□□ -0.66
SCARB2-225ENST00000640900 ATRNL1Q5VV63 1379 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 PITPNM2Q9BZ72 1349 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 ENTPD3O75355 529 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 REC8O95072 547 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms