RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 PXDNQ92626 1479 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 KLHDC4Q8TBB5 520 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 DBNDD2Q9BQY9 259 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 ZBTB3Q9H5J0 574 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 CUTAO60888 179 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 IL2RBP14784 551 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 PHKG2P15735 406 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 NLRP12P59046 1061 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 SPAG1Q07617 926 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 TOB2Q14106 344 aaPredicted RBP6.36□□□□□ -1.39
SCN3A-210ENST00000640652 ZCRB1Q8TBF4 217 aaKnown RBP6.36□□□□□ -1.39
SCN3A-210ENST00000640652 NUP88Q99567 741 aaPredicted RBP6.36□□□□□ -1.39
SCN3A-210ENST00000640652 ZNF609O15014 1411 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 TNS3Q68CZ2 1445 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 PIP4K2BP78356 416 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 SLFNL1Q499Z3 407 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 FBXO18Q8NFZ0 1043 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 CTCFLQ8NI51 663 aaPredicted RBP6.36□□□□□ -1.39
SCN3A-210ENST00000640652 ESR2Q92731 530 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 GOLGA1Q92805 767 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 TIGD1Q96MW7 591 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 NWD2Q9ULI1 1742 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 TRIP11Q15643 1979 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 GPAA1O43292 621 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 SLC9C2Q5TAH2 1124 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 LDHAL6AQ6ZMR3 332 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 PHLPP2Q6ZVD8 1323 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 MARCKSP29966 332 aaPredicted RBP6.36□□□□□ -1.39
SCN3A-210ENST00000640652 PUM3Q15397 648 aaKnown RBP6.36□□□□□ -1.39
SCN3A-210ENST00000640652 CEP112Q8N8E3 955 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 SLC26A6Q9BXS9 759 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 ZHX1Q9UKY1 873 aaPredicted RBP6.36□□□□□ -1.39
SCN3A-210ENST00000640652 NCOA5Q9HCD5 579 aaKnown RBP6.36□□□□□ -1.39
SCN3A-210ENST00000640652 COL15A1P39059 1388 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 MROH5Q6ZUA9 1318 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 MYSM1Q5VVJ2 828 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 DNAI1Q9UI46 699 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 KCNH3Q9ULD8 1083 aa6.36□□□□□ -1.39
SCN3A-210ENST00000640652 SYNRGQ9UMZ2 1314 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 MAST2Q6P0Q8 1798 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 EPS15P42566 896 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 FAM114A1Q8IWE2 563 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 RBM28Q9NW13 759 aaKnown RBP6.35□□□□□ -1.39
SCN3A-210ENST00000640652 DCCP43146 1447 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 IKBKBO14920 756 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 KCNJ6P48051 423 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 GNG11P61952 73 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 BAG1Q99933 345 aaPredicted RBP6.35□□□□□ -1.39
SCN3A-210ENST00000640652 TRMT112Q9UI30 125 aaKnown RBP6.35□□□□□ -1.39
SCN3A-210ENST00000640652 RCOR1Q9UKL0 485 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 PSDA5PKW4 1024 aaPredicted RBP6.35□□□□□ -1.39
SCN3A-210ENST00000640652 CDC5LQ99459 802 aaKnown RBP6.35□□□□□ -1.39
SCN3A-210ENST00000640652 PCDHA7Q9UN72 937 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 KCNQ3O43525 872 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 URI1O94763 535 aaPredicted RBP6.35□□□□□ -1.39
SCN3A-210ENST00000640652 RESTQ13127 1097 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 TRIM14Q14142 442 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 TRIML1Q8N9V2 468 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 NSUN7Q8NE18 718 aaKnown RBP6.35□□□□□ -1.39
SCN3A-210ENST00000640652 CMA1P23946 247 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 CAVIN4Q5BKX8 364 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 CT47A1Q5JQC4 288 aaPredicted RBP6.35□□□□□ -1.39
SCN3A-210ENST00000640652 FCHSD1Q86WN1 690 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 XAGE2Q96GT9 111 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 SNRKQ9NRH2 765 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 BCORQ6W2J9 1755 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 DEXIO95424 95 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 IVLP07476 585 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 CYP21A2P08686 494 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 CALM1P0DP23 149 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 CALM2P0DP24 149 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 CALM3P0DP25 149 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 ATP2B1P20020 1258 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 CCDC152Q4G0S7 254 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 CDK5RAP3Q96JB5 506 aa6.35□□□□□ -1.39
SCN3A-210ENST00000640652 PDIA3P30101 505 aaKnown RBP6.35□□□□□ -1.39
SCN3A-210ENST00000640652 TLR7Q9NYK1 1049 aaKnown RBP6.35□□□□□ -1.39
SCN3A-210ENST00000640652 ERICH4A6NGS2 130 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 FGFR1OPO95684 399 aaKnown RBP6.34□□□□□ -1.39
SCN3A-210ENST00000640652 PDE4BQ07343 736 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 CHST3Q7LGC8 479 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 CCDC12Q8WUD4 166 aaPredicted RBP6.34□□□□□ -1.39
SCN3A-210ENST00000640652 HEG1Q9ULI3 1381 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 LARGE1O95461 756 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 POSTNQ15063 836 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 KLHL10Q6JEL2 608 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 KIAA1328Q86T90 577 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 MLKLQ8NB16 471 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 CCDC85AQ96PX6 553 aaPredicted RBP6.34□□□□□ -1.39
SCN3A-210ENST00000640652 FAM107BQ9H098 131 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 MYO6Q9UM54 1294 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 WNK3Q9BYP7 1800 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 TRIM75PA6NK02 468 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 ELF2Q15723 593 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 USPL1Q5W0Q7 1092 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 XPO4Q9C0E2 1151 aaKnown RBP6.34□□□□□ -1.39
SCN3A-210ENST00000640652 CACNA1SQ13698 1873 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 NDUFA8P51970 172 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 FANCCQ00597 558 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 USP28Q96RU2 1077 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms