RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 CCDC77Q9BR77 488 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 CENPKQ9BS16 269 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 Q9H521 79 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 CHPF2Q9P2E5 772 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 PA2G4Q9UQ80 394 aaKnown RBP9.28□□□□□ -0.92
NECAP1-227ENST00000640648 ZNF148Q9UQR1 794 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 TRAPPC8Q9Y2L5 1435 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 WDR62O43379 1518 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 MRPS25P82663 173 aaKnown RBP9.28□□□□□ -0.92
NECAP1-227ENST00000640648 UBE3BQ7Z3V4 1068 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 KLHL23Q8NBE8 558 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 AIDAQ96BJ3 306 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 OLFM3Q96PB7 478 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 NEK1Q96PY6 1258 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 DNAJC25Q9H1X3 360 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 AMOTL2Q9Y2J4 779 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 SKIP12755 728 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 ZNF131P52739 623 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 AK2P54819 239 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 METTL24Q5JXM2 366 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 EGFL6Q8IUX8 553 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 PIK3R4Q99570 1358 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 BLMP54132 1417 aaPredicted RBP9.27□□□□□ -0.92
NECAP1-227ENST00000640648 MACROD2A1Z1Q3 448 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 TNNC1P63316 161 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 ATP8B2P98198 1209 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 MAP3K21Q5TCX8 1036 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 ALS2CLQ60I27 953 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 PAF1Q8N7H5 531 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 FBXO41Q8TF61 875 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 SELENOOQ9BVL4 669 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 VIPAS39Q9H9C1 493 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 ABCF2Q9UG63 623 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 BCAP29Q9UHQ4 241 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 BAIAP2L1Q9UHR4 511 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 A0A1W2PP64 1363 aa9.27□□□□□ -0.92
NECAP1-227ENST00000640648 NCKAP5LQ9HCH0 1330 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 GMNNO75496 209 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 IBSPP21815 317 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-227ENST00000640648 HSP90AA4PQ58FG1 418 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 CCDC144CPQ8IYA2 1237 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 ZNF513Q8N8E2 541 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-227ENST00000640648 HAUS1Q96CS2 278 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 TUBB6Q9BUF5 446 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 CLSTN2Q9H4D0 955 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 IQSEC3Q9UPP2 1182 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-227ENST00000640648 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.27□□□□□ -0.93
NECAP1-227ENST00000640648 UHRF1BP1LA0JNW5 1464 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 ITSN2Q9NZM3 1697 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 PAK2Q13177 524 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 MFN1Q8IWA4 741 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 C3orf20Q8ND61 904 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 ZNF483Q8TF39 744 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-227ENST00000640648 CTNNBL1Q8WYA6 563 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-227ENST00000640648 HMG20BQ9P0W2 317 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 TTC21BQ7Z4L5 1316 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 CLCN6P51797 869 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 LONRF2Q1L5Z9 754 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 G2E3Q7L622 706 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 TDRD7Q8NHU6 1098 aaKnown RBP9.27□□□□□ -0.93
NECAP1-227ENST00000640648 ZSWIM4Q9H7M6 989 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 NRDE2Q9H7Z3 1164 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 PRDM11Q9NQV5 511 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 RASAL2Q9UJF2 1139 aa9.27□□□□□ -0.93
NECAP1-227ENST00000640648 MAP3K5Q99683 1374 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 FERP16591 822 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 GNGT1P63211 74 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 ERCC6LQ2NKX8 1250 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 NME8Q8N427 588 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 ORC3Q9UBD5 711 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-227ENST00000640648 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-227ENST00000640648 CIB2O75838 187 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 BRD1O95696 1058 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 CHMLP26374 656 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 CEBPAP49715 358 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-227ENST00000640648 RNASELQ05823 741 aaKnown RBP9.26□□□□□ -0.93
NECAP1-227ENST00000640648 FKBP15Q5T1M5 1219 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 RASIP1Q5U651 963 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 INTS8Q75QN2 995 aaKnown RBP9.26□□□□□ -0.93
NECAP1-227ENST00000640648 VPS36Q86VN1 386 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 LRRC8AQ8IWT6 810 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 C17orf53Q8N3J3 647 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-227ENST00000640648 TSC1Q92574 1164 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 BAG1Q99933 345 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-227ENST00000640648 LRP2BPQ9P2M1 347 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 TCEAL9Q9UHQ7 104 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 DUOX2Q9NRD8 1548 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 CASQ2O14958 399 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-227ENST00000640648 RNF8O76064 485 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 SRGAP1Q7Z6B7 1085 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 TANGO6Q9C0B7 1094 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 ZHX3Q9H4I2 956 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 ZEB2O60315 1214 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 MTHFSDQ2M296 383 aaKnown RBP9.26□□□□□ -0.93
NECAP1-227ENST00000640648 ARMCX6Q7L4S7 300 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 TAOK1Q7L7X3 1001 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 CCDC63Q8NA47 563 aa9.26□□□□□ -0.93
NECAP1-227ENST00000640648 TSPYL2Q9H2G4 693 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-227ENST00000640648 ZBTB3Q9H5J0 574 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms