RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, human

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-222	ENST00000640634	ANGEL2	Q5VTE6	544 aa	Known RBP	13.31	□□□□□ -0.28
SCARB2-222	ENST00000640634	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.31	□□□□□ -0.28
SCARB2-222	ENST00000640634	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
SCARB2-222	ENST00000640634	HDAC9	Q9UKV0	1011 aa		13.31	□□□□□ -0.28
SCARB2-222	ENST00000640634	MYH2	Q9UKX2	1941 aa		13.31	□□□□□ -0.28
SCARB2-222	ENST00000640634	TTC41P	Q6P2S7	1318 aa		13.31	□□□□□ -0.28
SCARB2-222	ENST00000640634	ADM5	C9JUS6	153 aa		13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	TRAF5	O00463	557 aa		13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	PNMA8A	Q86V59	439 aa	Predicted RBP	13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	TEKT1	Q969V4	418 aa		13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	GPATCH3	Q96I76	525 aa		13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	TDRD3	Q9H7E2	651 aa	Known RBP	13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	PPP4R2	Q9NY27	417 aa		13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	STAP2	Q9UGK3	403 aa		13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	SERPINA10	Q9UK55	444 aa		13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	LDHD	Q86WU2	507 aa		13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	IL27	Q8NEV9	243 aa		13.3	□□□□□ -0.28
SCARB2-222	ENST00000640634	ECM29	Q5VYK3	1845 aa		13.29	□□□□□ -0.28
SCARB2-222	ENST00000640634	TOMM70	O94826	608 aa		13.29	□□□□□ -0.28
SCARB2-222	ENST00000640634	PRAMEF18	Q5VWM3	479 aa		13.29	□□□□□ -0.28
SCARB2-222	ENST00000640634	CDAN1	Q8IWY9	1227 aa		13.29	□□□□□ -0.28
SCARB2-222	ENST00000640634	CCDC82	Q8N4S0	544 aa		13.29	□□□□□ -0.28
SCARB2-222	ENST00000640634	ZGPAT	Q8N5A5	531 aa	Known RBP	13.29	□□□□□ -0.28
SCARB2-222	ENST00000640634	MAGEB6	Q8N7X4	407 aa		13.29	□□□□□ -0.28
SCARB2-222	ENST00000640634	SUGT1	Q9Y2Z0	365 aa		13.29	□□□□□ -0.28
SCARB2-222	ENST00000640634	MROH7-TTC4	A0A0A0MT08	1334 aa		13.29	□□□□□ -0.28
SCARB2-222	ENST00000640634	GAK	O14976	1311 aa		13.29	□□□□□ -0.28
SCARB2-222	ENST00000640634	POLR2A	P24928	1970 aa	Known RBP	13.28	□□□□□ -0.28
SCARB2-222	ENST00000640634	GLRX3	O76003	335 aa	Known RBP	13.28	□□□□□ -0.28
SCARB2-222	ENST00000640634	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.28	□□□□□ -0.28
SCARB2-222	ENST00000640634	CHADL	Q6NUI6	762 aa		13.28	□□□□□ -0.28
SCARB2-222	ENST00000640634	MIGA1	Q8NAN2	632 aa		13.28	□□□□□ -0.28
SCARB2-222	ENST00000640634	MTMR14	Q8NCE2	650 aa		13.28	□□□□□ -0.28
SCARB2-222	ENST00000640634	ZDHHC15	Q96MV8	337 aa		13.28	□□□□□ -0.28
SCARB2-222	ENST00000640634	VEZT	Q9HBM0	779 aa		13.28	□□□□□ -0.28
SCARB2-222	ENST00000640634	CEP350	Q5VT06	3117 aa		13.28	□□□□□ -0.28
SCARB2-222	ENST00000640634	MAST3	O60307	1309 aa		13.28	□□□□□ -0.28
SCARB2-222	ENST00000640634	GSPT1	P15170	499 aa	Known RBP	13.27	□□□□□ -0.28
SCARB2-222	ENST00000640634	PDE6A	P16499	860 aa		13.27	□□□□□ -0.28
SCARB2-222	ENST00000640634	BTD	P43251	543 aa		13.27	□□□□□ -0.28
SCARB2-222	ENST00000640634	DYNLL1	P63167	89 aa	Known RBP	13.27	□□□□□ -0.28
SCARB2-222	ENST00000640634	NAA16	Q6N069	864 aa	Predicted RBP	13.27	□□□□□ -0.28
SCARB2-222	ENST00000640634	CDC42EP5	Q6NZY7	148 aa		13.27	□□□□□ -0.28
SCARB2-222	ENST00000640634	HHIPL2	Q6UWX4	724 aa		13.27	□□□□□ -0.28
SCARB2-222	ENST00000640634	ZNF70	Q9UC06	446 aa	Predicted RBP	13.27	□□□□□ -0.28
SCARB2-222	ENST00000640634	PGAP2	Q9UHJ9	254 aa		13.27	□□□□□ -0.28
SCARB2-222	ENST00000640634	TCRBV5S4A2T	A0A5A2	114 aa		13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	ERC2	O15083	957 aa		13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	ITGBL1	O95965	494 aa	Predicted RBP	13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	CYP7A1	P22680	504 aa		13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	HDLBP	Q00341	1268 aa	Known RBP	13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	NFIA	Q12857	509 aa		13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	SPDYE2	Q495Y8	402 aa		13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	SLC9C2	Q5TAH2	1124 aa		13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	USP48	Q86UV5	1035 aa		13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	CNTROB	Q8N137	903 aa		13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
SCARB2-222	ENST00000640634	ZNF532	Q9HCE3	1301 aa		13.26	□□□□□ -0.29
SCARB2-222	ENST00000640634	MYH7	P12883	1935 aa		13.26	□□□□□ -0.29
SCARB2-222	ENST00000640634	TCP10L2	B9ZVM9	353 aa		13.26	□□□□□ -0.29
SCARB2-222	ENST00000640634	RGS3	P49796	1198 aa		13.26	□□□□□ -0.29
SCARB2-222	ENST00000640634	ERICH6B	Q5W0A0	696 aa		13.26	□□□□□ -0.29
SCARB2-222	ENST00000640634	KRT26	Q7Z3Y9	468 aa		13.26	□□□□□ -0.29
SCARB2-222	ENST00000640634	RBM46	Q8TBY0	533 aa	Known RBP	13.26	□□□□□ -0.29
SCARB2-222	ENST00000640634	CNTNAP1	P78357	1384 aa		13.26	□□□□□ -0.29
SCARB2-222	ENST00000640634	RHBDL3	P58872	404 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	MAP3K12	Q12852	859 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	MKRN3	Q13064	507 aa	Known RBP	13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	TTF1	Q15361	905 aa	Predicted RBP	13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	ZFPM1	Q8IX07	1006 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	KBTBD3	Q8NAB2	608 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	SMC1B	Q8NDV3	1235 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	OSBPL3	Q9H4L5	887 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	USP40	Q9NVE5	1235 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	WDR70	Q9NW82	654 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	FZD1	Q9UP38	647 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	RFX7	Q2KHR2	1363 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	GPR75-ASB3	A0A0A6YYF3	556 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	ADD2	P35612	726 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	MFAP1	P55081	439 aa	Known RBP	13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	DCPS	Q96C86	337 aa	Known RBP	13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	FSD1	Q9BTV5	496 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	MRI	Q9BWK5	157 aa		13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	DDX4	Q9NQI0	724 aa	Known RBP	13.25	□□□□□ -0.29
SCARB2-222	ENST00000640634	CDK5RAP2	Q96SN8	1893 aa		13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	SSC5D	A1L4H1	1573 aa		13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	TRIM6-TRIM34	B2RNG4	842 aa		13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	WDHD1	O75717	1129 aa	Predicted RBP	13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	SLURP2	P0DP57	97 aa		13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	GSTO1	P78417	241 aa		13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	TCP10	Q12799	353 aa		13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	TTC22	Q5TAA0	569 aa		13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	RILPL2	Q969X0	211 aa		13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	FAM163A	Q96GL9	167 aa	Predicted RBP	13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	SEC62	Q99442	399 aa	Known RBP	13.24	□□□□□ -0.29

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