RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 OTUD7AQ8TE49 926 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-220ENST00000640076 MTFR1LQ9H019 292 aa9.72□□□□□ -0.85
SCARB2-220ENST00000640076 PSDA5PKW4 1024 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L5A8MUK1 530 aa9.72□□□□□ -0.85
SCARB2-220ENST00000640076 IGHMBP2P38935 993 aaKnown RBP9.72□□□□□ -0.85
SCARB2-220ENST00000640076 DDX46Q7L014 1031 aaKnown RBP9.72□□□□□ -0.85
SCARB2-220ENST00000640076 ANKRD18AQ8IVF6 992 aa9.72□□□□□ -0.85
SCARB2-220ENST00000640076 CLASRPQ8N2M8 674 aaKnown RBP9.72□□□□□ -0.85
SCARB2-220ENST00000640076 CELF1Q92879 486 aaKnown RBP9.72□□□□□ -0.85
SCARB2-220ENST00000640076 GPATCH3Q96I76 525 aa9.72□□□□□ -0.85
SCARB2-220ENST00000640076 MPHOSPH8Q99549 860 aa9.72□□□□□ -0.85
SCARB2-220ENST00000640076 CNNM1Q9NRU3 951 aa9.72□□□□□ -0.85
SCARB2-220ENST00000640076 SALL3Q9BXA9 1300 aa9.71□□□□□ -0.86
SCARB2-220ENST00000640076 MAPK1P28482 360 aa9.71□□□□□ -0.86
SCARB2-220ENST00000640076 HOXA10P31260 410 aaPredicted RBP9.71□□□□□ -0.86
SCARB2-220ENST00000640076 RPS8P62241 208 aaKnown RBP9.71□□□□□ -0.86
SCARB2-220ENST00000640076 TMEM92Q6UXU6 159 aa9.71□□□□□ -0.86
SCARB2-220ENST00000640076 RPGRQ92834 1020 aaKnown RBP9.71□□□□□ -0.86
SCARB2-220ENST00000640076 TINF2Q9BSI4 451 aa9.71□□□□□ -0.86
SCARB2-220ENST00000640076 SUGT1Q9Y2Z0 365 aa9.71□□□□□ -0.86
SCARB2-220ENST00000640076 COL11A2P13942 1736 aaPredicted RBP9.71□□□□□ -0.86
SCARB2-220ENST00000640076 PDE6BP35913 854 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 GRAPQ13588 217 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 TNNI3KQ59H18 835 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 LDLRAD1Q5T700 205 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 VGLL2Q8N8G2 317 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 GRAPLQ8TC17 118 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-220ENST00000640076 EAF2Q96CJ1 260 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-220ENST00000640076 MS4A3Q96HJ5 214 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 PLCD4Q9BRC7 762 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 GPR108Q9NPR9 543 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 BSDC1Q9NW68 430 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-220ENST00000640076 CEP126Q9P2H0 1117 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 PRKAG2Q9UGJ0 569 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
SCARB2-220ENST00000640076 FPGT-TNNI3KV9GXZ4 949 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 C10orf71Q711Q0 1435 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 MROH5Q6ZUA9 1318 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 PPP1R3GB7ZBB8 358 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 FDX1P10109 184 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 SRGNP10124 158 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 FOSBP53539 338 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 SWI5Q1ZZU3 235 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 CCDC144BQ3MJ40 725 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 EAPPQ56P03 285 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-220ENST00000640076 METTL24Q5JXM2 366 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 AACSQ86V21 672 aa9.7□□□□□ -0.86
SCARB2-220ENST00000640076 DHX38Q92620 1227 aaKnown RBP9.7□□□□□ -0.86
SCARB2-220ENST00000640076 H3BRB1 525 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 SKIP12755 728 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 NPR1P16066 1061 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 MX1P20591 662 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 PDE1AP54750 535 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 SDE2Q6IQ49 451 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 ZSCAN29Q8IWY8 852 aaPredicted RBP9.69□□□□□ -0.86
SCARB2-220ENST00000640076 SLC43A3Q8NBI5 491 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 RBM17Q96I25 401 aaKnown RBP9.69□□□□□ -0.86
SCARB2-220ENST00000640076 CRAMP1Q96RY5 1269 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 OSBPL3Q9H4L5 887 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 TUT1Q9H6E5 874 aaKnown RBP9.69□□□□□ -0.86
SCARB2-220ENST00000640076 METTL14Q9HCE5 456 aaKnown RBP9.69□□□□□ -0.86
SCARB2-220ENST00000640076 STAP2Q9UGK3 403 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 DCTN4Q9UJW0 460 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 PCDHGC3Q9UN70 934 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 KIF13BQ9NQT8 1826 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 A0A1B0GUL6 1792 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 ZNF609O15014 1411 aa9.69□□□□□ -0.86
SCARB2-220ENST00000640076 ICMTO60725 284 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 PDE8BO95263 885 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 IFIT2P09913 472 aaKnown RBP9.68□□□□□ -0.86
SCARB2-220ENST00000640076 POLD1P28340 1107 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 C2CD5Q86YS7 1000 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 SLF2Q8IX21 1173 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 TLR7Q9NYK1 1049 aaKnown RBP9.68□□□□□ -0.86
SCARB2-220ENST00000640076 DBNLQ9UJU6 430 aaKnown RBP9.68□□□□□ -0.86
SCARB2-220ENST00000640076 MINPP1Q9UNW1 487 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 ABL1P00519 1130 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 RASA1P20936 1047 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 TIMM10P62072 90 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 SETQ01105 290 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-220ENST00000640076 CHRNDQ07001 517 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 C6orf132Q5T0Z8 1188 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 TSHZ3Q63HK5 1081 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 DEPDC4Q8N2C3 294 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 TSC1Q92574 1164 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 ARMC5Q96C12 935 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 CCDC8Q9H0W5 538 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-220ENST00000640076 AKAP2Q9Y2D5 859 aa9.68□□□□□ -0.86
SCARB2-220ENST00000640076 AOX1Q06278 1338 aa9.67□□□□□ -0.86
SCARB2-220ENST00000640076 GOLGB1Q14789 3259 aaKnown RBP9.67□□□□□ -0.86
SCARB2-220ENST00000640076 A0A1B0GUL7 405 aa9.67□□□□□ -0.86
SCARB2-220ENST00000640076 G3V3G9 751 aa9.67□□□□□ -0.86
SCARB2-220ENST00000640076 H0YIN7 160 aa9.67□□□□□ -0.86
SCARB2-220ENST00000640076 HOXA2O43364 376 aa9.67□□□□□ -0.86
SCARB2-220ENST00000640076 BBOX1O75936 387 aa9.67□□□□□ -0.86
SCARB2-220ENST00000640076 ATP2B1P20020 1258 aa9.67□□□□□ -0.86
SCARB2-220ENST00000640076 PUM3Q15397 648 aaKnown RBP9.67□□□□□ -0.86
SCARB2-220ENST00000640076 ATP2B3Q16720 1220 aa9.67□□□□□ -0.86
SCARB2-220ENST00000640076 METTL16Q86W50 562 aaKnown RBP9.67□□□□□ -0.86
SCARB2-220ENST00000640076 NT5DC4Q86YG4 428 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms