RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 EDC3Q96F86 508 aaKnown RBP11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 DDX21Q9NR30 783 aaKnown RBP eCLIP11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 TRMT1Q9NXH9 659 aaKnown RBP11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 RFX7Q2KHR2 1363 aa11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 SCN7AQ01118 1682 aa11.65□□□□□ -0.55
HNRNPU-224ENST00000640056 CHRNA5P30532 468 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 FGD1P98174 961 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 MCMDC2Q4G0Z9 681 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 FBXO38Q6PIJ6 1188 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 DHX32Q7L7V1 743 aaKnown RBP11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 USP28Q96RU2 1077 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 TUBB4AP04350 444 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 IGKV5-2P06315 115 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 ST5P78524 1137 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 DHX8Q14562 1220 aaKnown RBP11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 PRR5LQ6MZQ0 368 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 BICDL1Q6ZP65 573 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 CNBD1Q8NA66 436 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 KLHDC4Q8TBB5 520 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 L2HGDHQ9H9P8 463 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 COPRSQ9NQ92 184 aa11.64□□□□□ -0.55
HNRNPU-224ENST00000640056 PRAMEF22A3QJZ6 481 aa11.63□□□□□ -0.55
HNRNPU-224ENST00000640056 CTDNEP1O95476 244 aa11.63□□□□□ -0.55
HNRNPU-224ENST00000640056 ELF2Q15723 593 aa11.63□□□□□ -0.55
HNRNPU-224ENST00000640056 NBPF11Q86T75 865 aa11.63□□□□□ -0.55
HNRNPU-224ENST00000640056 AOPEPQ8N6M6 819 aa11.63□□□□□ -0.55
HNRNPU-224ENST00000640056 FSIP1Q8NA03 581 aa11.63□□□□□ -0.55
HNRNPU-224ENST00000640056 BPIFA3Q9BQP9 254 aa11.63□□□□□ -0.55
HNRNPU-224ENST00000640056 FTOQ9C0B1 505 aaKnown RBP eCLIP11.63□□□□□ -0.557e-8■■■■□ 22.1
HNRNPU-224ENST00000640056 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.63□□□□□ -0.55
HNRNPU-224ENST00000640056 DBNLQ9UJU6 430 aaKnown RBP11.63□□□□□ -0.55
HNRNPU-224ENST00000640056 V9GYY5 206 aaPredicted RBP11.63□□□□□ -0.55
HNRNPU-224ENST00000640056 PTPDC1A2A3K4 754 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 ERVV-1B6SEH8 477 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 KCNJ6P48051 423 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 ME1P48163 572 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 AIMP1Q12904 312 aaKnown RBP11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 PDIA6Q15084 440 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 TNNI3KQ59H18 835 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 CCDC129Q6ZRS4 1044 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 RIC3Q7Z5B4 369 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 FMR1NBQ8N0W7 255 aaPredicted RBP11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 CHMP4CQ96CF2 233 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 LRRC2Q9BYS8 371 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 AGXT2Q9BYV1 514 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 FPGT-TNNI3KV9GXZ4 949 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 CCDC66A2RUB6 948 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 NEURL1BA8MQ27 555 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 NPHP1O15259 732 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 EXOSC10Q01780 885 aaKnown RBP11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 NEXNQ0ZGT2 675 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 GCKRQ14397 625 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 BMS1Q14692 1282 aaKnown RBP11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 CCDC93Q567U6 631 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 E4F1Q66K89 784 aaPredicted RBP11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 ADALQ6DHV7 355 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 NBPF10Q6P3W6 841 aaKnown RBP11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 STOX1Q6ZVD7 989 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 CREBRFQ8IUR6 639 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 NBPF15Q8N660 670 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 CCDC150Q8NCX0 1101 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 SEC62Q99442 399 aaKnown RBP11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 HAUS7Q99871 368 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 SDF4Q9BRK5 362 aa11.62□□□□□ -0.55
HNRNPU-224ENST00000640056 ZNF609O15014 1411 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 A0A087WWV3 80 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 A0A1W2PQ27 194 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 A0A1W2PQ64 194 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 A0A1W2PQD8 194 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 CCDC85CA6NKD9 419 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 DLL1O00548 723 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 EPHA10Q5JZY3 1008 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 SOGA3Q5TF21 947 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 STYK1Q6J9G0 422 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 TPTE2Q6XPS3 522 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 MRPS27Q92552 414 aaKnown RBP11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 CNKSR1Q969H4 720 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 RTEL1Q9NZ71 1219 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 PCDHA7Q9UN72 937 aa11.61□□□□□ -0.55
HNRNPU-224ENST00000640056 H2AFXP16104 143 aaPredicted RBP11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 APOBRQ0VD83 1088 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 TFCP2Q12800 502 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 NBPF5PQ86XG9 351 aaPredicted RBP11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 ZNF274Q96GC6 653 aaPredicted RBP11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 PPP1R13BQ96KQ4 1090 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 ZNF446Q9NWS9 450 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 SALL1Q9NSC2 1324 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 BRCA1P38398 1863 aaKnown RBP11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 NRDCO43847 1150 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 RFX5P48382 616 aaPredicted RBP11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 CCT2P78371 535 aaKnown RBP11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 ZRSR1Q15695 479 aaKnown RBP11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 KIF6Q6ZMV9 814 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms