RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TECPR2O15040 1411 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 ALG1L2C9J202 215 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 CPNE3O75131 537 aaKnown RBP9.26□□□□□ -0.93
NECAP1-220ENST00000639841 TM4SF20Q53R12 229 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 ZNF280DQ6N043 979 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 SAMD7Q7Z3H4 446 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 GGNBP2Q9H3C7 697 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 SALL2Q9Y467 1007 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-220ENST00000639841 PTCH2Q9Y6C5 1203 aa9.26□□□□□ -0.93
NECAP1-220ENST00000639841 PXDNQ92626 1479 aa9.25□□□□□ -0.93
NECAP1-220ENST00000639841 NWD2Q9ULI1 1742 aa9.25□□□□□ -0.93
NECAP1-220ENST00000639841 MAGEB6P1A0A0J9YX57 407 aa9.25□□□□□ -0.93
NECAP1-220ENST00000639841 ACTN4O43707 911 aaKnown RBP9.25□□□□□ -0.93
NECAP1-220ENST00000639841 FAM163BP0C2L3 166 aa9.25□□□□□ -0.93
NECAP1-220ENST00000639841 MYBPC2Q14324 1141 aa9.25□□□□□ -0.93
NECAP1-220ENST00000639841 TMEM95Q3KNT9 176 aa9.25□□□□□ -0.93
NECAP1-220ENST00000639841 ERFEQ4G0M1 354 aa9.25□□□□□ -0.93
NECAP1-220ENST00000639841 INO80DQ53TQ3 878 aaPredicted RBP9.25□□□□□ -0.93
NECAP1-220ENST00000639841 THAP3Q8WTV1 239 aaPredicted RBP9.25□□□□□ -0.93
NECAP1-220ENST00000639841 RBSNQ9H1K0 784 aa9.25□□□□□ -0.93
NECAP1-220ENST00000639841 KLF15Q9UIH9 416 aa9.25□□□□□ -0.93
NECAP1-220ENST00000639841 ADAMTS2O95450 1211 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 SEC24BO95487 1268 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 EIF4A3P38919 411 aaKnown RBP9.24□□□□□ -0.93
NECAP1-220ENST00000639841 RAPGEF1Q13905 1077 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 KMT5BQ4FZB7 885 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 C1orf53Q5VUE5 145 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 PCNX4Q63HM2 1172 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 STAG2Q8N3U4 1231 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 CHAC2Q8WUX2 184 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 CPLX3Q8WVH0 158 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 TRIM56Q9BRZ2 755 aaKnown RBP9.24□□□□□ -0.93
NECAP1-220ENST00000639841 PAGR1Q9BTK6 254 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 PTPRHQ9HD43 1115 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 PLAAQ9Y263 795 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 ZAP70P43403 619 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 FOXK2Q01167 660 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 HLTFQ14527 1009 aaKnown RBP eCLIP9.24□□□□□ -0.93
NECAP1-220ENST00000639841 MAPRE1Q15691 268 aaKnown RBP9.24□□□□□ -0.93
NECAP1-220ENST00000639841 KSR2Q6VAB6 950 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 ZNF296Q8WUU4 475 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-220ENST00000639841 CCDC74AQ96AQ1 378 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 NUDT12Q9BQG2 462 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 NOC4LQ9BVI4 516 aaKnown RBP9.24□□□□□ -0.93
NECAP1-220ENST00000639841 ASPSCR1Q9BZE9 553 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 ZIM2Q9NZV7 527 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 MAPK8IP1Q9UQF2 711 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 ANKRD30BQ9BXX2 1392 aa9.24□□□□□ -0.93
NECAP1-220ENST00000639841 A0A087X0B3 334 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 MINDY4BA8MYZ0 360 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 TBX3O15119 743 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 AKAP10O43572 662 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 DIAPH1O60610 1272 aaKnown RBP9.23□□□□□ -0.93
NECAP1-220ENST00000639841 GDF10P55107 478 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 POTEEQ6S8J3 1075 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 SRRTQ9BXP5 876 aaKnown RBP9.23□□□□□ -0.93
NECAP1-220ENST00000639841 COL6A1P12109 1028 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 MAP3K10Q02779 954 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 COL9A2Q14055 689 aaPredicted RBP9.23□□□□□ -0.93
NECAP1-220ENST00000639841 CCDC81Q6ZN84 652 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 UBR7Q8N806 425 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 NT5C1AQ9BXI3 368 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 PPCSQ9HAB8 311 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 SERTAD1Q9UHV2 236 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 TAGLN3Q9UI15 199 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 LZTS1Q9Y250 596 aa9.23□□□□□ -0.93
NECAP1-220ENST00000639841 ROBO2Q9HCK4 1378 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 SLIT2O94813 1529 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 RASGRP1O95267 797 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 MYCLP1P12525 358 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-220ENST00000639841 MAN1A1P33908 653 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 NFKB2Q00653 900 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 GPR153Q6NV75 609 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 FBXL19Q6PCT2 694 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 NXPE4Q6UWF7 544 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 BCL9LQ86UU0 1499 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 USP32Q8NFA0 1604 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 E2F7Q96AV8 911 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 FMN2Q9NZ56 1722 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 ANAPC4Q9UJX5 808 aa9.22□□□□□ -0.93
NECAP1-220ENST00000639841 NAIPQ13075 1403 aa9.21□□□□□ -0.93
NECAP1-220ENST00000639841 ARHGEF10O15013 1369 aa9.21□□□□□ -0.93
NECAP1-220ENST00000639841 EIF3AQ14152 1382 aaKnown RBP9.21□□□□□ -0.93
NECAP1-220ENST00000639841 BACH1O14867 736 aa9.21□□□□□ -0.93
NECAP1-220ENST00000639841 SEPT6Q14141 434 aa9.21□□□□□ -0.93
NECAP1-220ENST00000639841 UNC5CLQ8IV45 518 aa9.21□□□□□ -0.93
NECAP1-220ENST00000639841 CHPFQ8IZ52 775 aa9.21□□□□□ -0.93
NECAP1-220ENST00000639841 NUDT16Q96DE0 195 aaKnown RBP9.21□□□□□ -0.93
NECAP1-220ENST00000639841 MRPS23Q9Y3D9 190 aaKnown RBP9.21□□□□□ -0.93
NECAP1-220ENST00000639841 RRBP1Q9P2E9 1410 aaKnown RBP9.21□□□□□ -0.94
NECAP1-220ENST00000639841 ABCC11Q96J66 1382 aa9.21□□□□□ -0.94
NECAP1-220ENST00000639841 POTECB2RU33 542 aa9.21□□□□□ -0.94
NECAP1-220ENST00000639841 RNF40O75150 1001 aa9.21□□□□□ -0.94
NECAP1-220ENST00000639841 TRIM37O94972 964 aa9.21□□□□□ -0.94
NECAP1-220ENST00000639841 MYCP01106 439 aaPredicted RBP9.21□□□□□ -0.94
NECAP1-220ENST00000639841 TNNI3KQ59H18 835 aa9.21□□□□□ -0.94
NECAP1-220ENST00000639841 ACBD5Q5T8D3 534 aaPredicted RBP9.21□□□□□ -0.94
NECAP1-220ENST00000639841 SLC9A9Q8IVB4 645 aa9.21□□□□□ -0.94
NECAP1-220ENST00000639841 IFNL3Q8IZI9 196 aa9.21□□□□□ -0.94
NECAP1-220ENST00000639841 ZBED2Q9BTP6 218 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms