RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 PATL2C9JE40 543 aaKnown RBP22.04■■□□□ 1.12
CROCCP2-206ENST00000639594 PTGS1P23219 599 aa22.04■■□□□ 1.12
CROCCP2-206ENST00000639594 METAP2P50579 478 aaKnown RBP eCLIP22.04■■□□□ 1.12
CROCCP2-206ENST00000639594 SIK1P57059 783 aa22.04■■□□□ 1.12
CROCCP2-206ENST00000639594 STK38Q15208 465 aa22.04■■□□□ 1.12
CROCCP2-206ENST00000639594 STX1AQ16623 288 aa22.04■■□□□ 1.12
CROCCP2-206ENST00000639594 IFNL3Q8IZI9 196 aa22.04■■□□□ 1.12
CROCCP2-206ENST00000639594 KIAA1524Q8TCG1 905 aa22.04■■□□□ 1.12
CROCCP2-206ENST00000639594 AIFM3Q96NN9 605 aa22.04■■□□□ 1.12
CROCCP2-206ENST00000639594 BCORQ6W2J9 1755 aa22.03■■□□□ 1.12
CROCCP2-206ENST00000639594 A0A087WWV3 80 aa22.03■■□□□ 1.12
CROCCP2-206ENST00000639594 A0A1B0GVL5 298 aa22.03■■□□□ 1.12
CROCCP2-206ENST00000639594 MBD4O95243 580 aa22.03■■□□□ 1.12
CROCCP2-206ENST00000639594 MAP3K12Q12852 859 aa22.03■■□□□ 1.12
CROCCP2-206ENST00000639594 APOA5Q6Q788 366 aa22.03■■□□□ 1.12
CROCCP2-206ENST00000639594 BRAPQ7Z569 592 aa22.03■■□□□ 1.12
CROCCP2-206ENST00000639594 FMR1NBQ8N0W7 255 aaPredicted RBP22.03■■□□□ 1.12
CROCCP2-206ENST00000639594 IGDCC4Q8TDY8 1250 aa22.03■■□□□ 1.12
CROCCP2-206ENST00000639594 POLR3EQ9NVU0 708 aa22.03■■□□□ 1.12
CROCCP2-206ENST00000639594 CDC27P30260 824 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 KIF23Q02241 960 aaPredicted RBP22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 CTDSPL2Q05D32 466 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 ARMT1Q9H993 441 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 TACC3Q9Y6A5 838 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 CASZ1Q86V15 1759 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 TAF1P21675 1872 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 A0A1W2PQ27 194 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 A0A1W2PQ64 194 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 A0A1W2PQD8 194 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 BCAMP50895 628 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 SF3A1Q15459 793 aaKnown RBP22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 CCDC152Q4G0S7 254 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 PARP10Q53GL7 1025 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 ERCC4Q92889 916 aaPredicted RBP22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 TMEM87BQ96K49 555 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 NIP7Q9Y221 180 aaKnown RBP eCLIP22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 COL4A1P02462 1669 aa22.02■■□□□ 1.12
CROCCP2-206ENST00000639594 YEATS4O95619 227 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 NTSR2O95665 410 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 DRC7Q8IY82 874 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 LY9Q9HBG7 655 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 NRBP1Q9UHY1 535 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 SPTLC2O15270 562 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 NDUFA8P51970 172 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 CCDC186Q7Z3E2 898 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 CCDC144CPQ8IYA2 1237 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 KCNG4Q8TDN1 519 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 ALG1Q9BT22 464 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 NAPBQ9H115 298 aa22.01■■□□□ 1.11
CROCCP2-206ENST00000639594 EP400Q96L91 3159 aa22■■□□□ 1.11
CROCCP2-206ENST00000639594 IGHMBP2P38935 993 aaKnown RBP22■■□□□ 1.11
CROCCP2-206ENST00000639594 SYNE3Q6ZMZ3 975 aa22■■□□□ 1.11
CROCCP2-206ENST00000639594 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22■■□□□ 1.11
CROCCP2-206ENST00000639594 MICU3Q86XE3 530 aa22■■□□□ 1.11
CROCCP2-206ENST00000639594 PHKBQ93100 1093 aa22■■□□□ 1.11
CROCCP2-206ENST00000639594 CICQ96RK0 1608 aaPredicted RBP22■■□□□ 1.11
CROCCP2-206ENST00000639594 TIAM2Q8IVF5 1701 aa22■■□□□ 1.11
CROCCP2-206ENST00000639594 GSG1L2A8MUP6 293 aa21.99■■□□□ 1.11
CROCCP2-206ENST00000639594 GOLGA6L19H0YKK7 550 aa21.99■■□□□ 1.11
CROCCP2-206ENST00000639594 HSP90AA2PQ14568 343 aaPredicted RBP21.99■■□□□ 1.11
CROCCP2-206ENST00000639594 TMEM67Q5HYA8 995 aa21.99■■□□□ 1.11
CROCCP2-206ENST00000639594 NFXL1Q6ZNB6 911 aa21.99■■□□□ 1.11
CROCCP2-206ENST00000639594 ZSWIM5Q9P217 1185 aa21.99■■□□□ 1.11
CROCCP2-206ENST00000639594 A0A1B0GUL6 1792 aa21.99■■□□□ 1.11
CROCCP2-206ENST00000639594 PRKAB2O43741 272 aa21.99■■□□□ 1.11
CROCCP2-206ENST00000639594 ANO1Q5XXA6 986 aa21.99■■□□□ 1.11
CROCCP2-206ENST00000639594 MYL10Q9BUA6 226 aa21.99■■□□□ 1.11
CROCCP2-206ENST00000639594 ZBTB43O43298 467 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 RRP9O43818 475 aaKnown RBP21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 CDKL5O76039 1030 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 FAM217BQ9NTX9 383 aaPredicted RBP21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 ANO10Q9NW15 660 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 TAOK2Q9UL54 1235 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 RTL9Q8NET4 1388 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 COL5A3P25940 1745 aaPredicted RBP21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 CHRNDQ07001 517 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 NTRK3Q16288 839 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 SGMS1Q86VZ5 419 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 LCORLQ8N3X6 602 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 RGS22Q8NE09 1264 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 SDF4Q9BRK5 362 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 TRPC5Q9UL62 973 aaPredicted RBP21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 BTAF1O14981 1849 aa21.98■■□□□ 1.11
CROCCP2-206ENST00000639594 KRT40Q6A162 431 aa21.97■■□□□ 1.11
CROCCP2-206ENST00000639594 DHX40Q8IX18 779 aaKnown RBP21.97■■□□□ 1.11
CROCCP2-206ENST00000639594 GOLGA8AA7E2F4 631 aa21.97■■□□□ 1.11
CROCCP2-206ENST00000639594 RANBP6O60518 1105 aaKnown RBP21.97■■□□□ 1.11
CROCCP2-206ENST00000639594 AKNAD1Q5T1N1 836 aa21.97■■□□□ 1.11
CROCCP2-206ENST00000639594 CPLX2Q6PUV4 134 aaKnown RBP21.97■■□□□ 1.11
CROCCP2-206ENST00000639594 SARM1Q6SZW1 724 aa21.97■■□□□ 1.11
CROCCP2-206ENST00000639594 CLIP2Q9UDT6 1046 aa21.97■■□□□ 1.11
CROCCP2-206ENST00000639594 SBF2Q86WG5 1849 aa21.96■■□□□ 1.11
CROCCP2-206ENST00000639594 IFIT3O14879 490 aaKnown RBP21.96■■□□□ 1.11
CROCCP2-206ENST00000639594 RBM10P98175 930 aaKnown RBP21.96■■□□□ 1.11
CROCCP2-206ENST00000639594 LRMPQ12912 555 aa21.96■■□□□ 1.11
CROCCP2-206ENST00000639594 AXDND1Q5T1B0 1012 aaPredicted RBP21.96■■□□□ 1.11
CROCCP2-206ENST00000639594 VPS37DQ86XT2 251 aa21.96■■□□□ 1.11
CROCCP2-206ENST00000639594 SLC4A4Q9Y6R1 1079 aa21.96■■□□□ 1.11
CROCCP2-206ENST00000639594 LIFRP42702 1097 aa21.95■■□□□ 1.1
CROCCP2-206ENST00000639594 KCNQ4P56696 695 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms