RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CCT6AP40227 531 aaKnown RBP16.38■□□□□ 0.21
SCARB2-216ENST00000639300 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-216ENST00000639300 ZNF804AQ7Z570 1209 aa16.38■□□□□ 0.21
SCARB2-216ENST00000639300 FSD2A1L4K1 749 aa16.38■□□□□ 0.21
SCARB2-216ENST00000639300 ERVV-2B6SEH9 535 aa16.38■□□□□ 0.21
SCARB2-216ENST00000639300 HIBADHP31937 336 aaKnown RBP16.38■□□□□ 0.21
SCARB2-216ENST00000639300 RDXP35241 583 aaKnown RBP16.38■□□□□ 0.21
SCARB2-216ENST00000639300 C6orf50Q9HD87 102 aa16.38■□□□□ 0.21
SCARB2-216ENST00000639300 ARFGAP3Q9NP61 516 aa16.38■□□□□ 0.21
SCARB2-216ENST00000639300 AATFQ9NY61 560 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCARB2-216ENST00000639300 TOM1O60784 492 aa16.38■□□□□ 0.21
SCARB2-216ENST00000639300 MYSM1Q5VVJ2 828 aa16.38■□□□□ 0.21
SCARB2-216ENST00000639300 SPAG5Q96R06 1193 aa16.38■□□□□ 0.21
SCARB2-216ENST00000639300 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
SCARB2-216ENST00000639300 ADORA1P30542 326 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 ARID5AQ03989 594 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 DHX37Q8IY37 1157 aaKnown RBP16.37■□□□□ 0.21
SCARB2-216ENST00000639300 SAMM50Q9Y512 469 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 PLEKHG1Q9ULL1 1385 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 RIOK3O14730 519 aaKnown RBP16.37■□□□□ 0.21
SCARB2-216ENST00000639300 FANCCQ00597 558 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 CUL4AQ13619 759 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 LETM2Q2VYF4 491 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 PIK3AP1Q6ZUJ8 805 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 RGS12O14924 1447 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 PRPF4BQ13523 1007 aaKnown RBP16.37■□□□□ 0.21
SCARB2-216ENST00000639300 KRT222Q8N1A0 295 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 ASAP1Q9ULH1 1129 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
SCARB2-216ENST00000639300 UBXN1Q04323 297 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 CCDC87Q9NVE4 849 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 CLASP1Q7Z460 1538 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 SASH1O94885 1247 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 CYLC1P35663 651 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-216ENST00000639300 ALS2CR12Q96Q35 445 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 PPP1R9BQ96SB3 815 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 VPS16Q9H269 839 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 GUCA1BQ9UMX6 200 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 LRMPQ12912 555 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 PUF60Q9UHX1 559 aaKnown RBP16.36■□□□□ 0.21
SCARB2-216ENST00000639300 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 LARGE1O95461 756 aa16.36■□□□□ 0.21
SCARB2-216ENST00000639300 BAG1Q99933 345 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-216ENST00000639300 ANKRD2Q9GZV1 360 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 NFE2L3Q9Y4A8 694 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 ABCC3O15438 1527 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 IQGAP3Q86VI3 1631 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 CTAGE15A4D2H0 777 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 CTAGE8P0CG41 777 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 PDE6AP16499 860 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 CTAGE6Q86UF2 777 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 CTAGE4Q8IX94 777 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 SYCP3Q8IZU3 236 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 ZMYND15Q9H091 742 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 LMAN1P49257 510 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 ZNF569Q5MCW4 686 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 KRT79Q5XKE5 535 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 RRP36Q96EU6 259 aaKnown RBP16.35■□□□□ 0.21
SCARB2-216ENST00000639300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCARB2-216ENST00000639300 VPS54Q9P1Q0 977 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 MACROD2A1Z1Q3 448 aa16.35■□□□□ 0.21
SCARB2-216ENST00000639300 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
SCARB2-216ENST00000639300 ZNF274Q96GC6 653 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-216ENST00000639300 CTSWP56202 376 aa16.34■□□□□ 0.21
SCARB2-216ENST00000639300 SCRN1Q12765 414 aa16.34■□□□□ 0.21
SCARB2-216ENST00000639300 TEX11Q8IYF3 940 aa16.34■□□□□ 0.21
SCARB2-216ENST00000639300 CCDC113Q9H0I3 377 aa16.34■□□□□ 0.21
SCARB2-216ENST00000639300 GREM2Q9H772 168 aa16.34■□□□□ 0.21
SCARB2-216ENST00000639300 PFKFB2O60825 505 aa16.34■□□□□ 0.21
SCARB2-216ENST00000639300 CUTAO60888 179 aa16.34■□□□□ 0.21
SCARB2-216ENST00000639300 PI16Q6UXB8 463 aa16.34■□□□□ 0.21
SCARB2-216ENST00000639300 TRMT44Q8IYL2 757 aaKnown RBP16.34■□□□□ 0.21
SCARB2-216ENST00000639300 CDK12Q9NYV4 1490 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-216ENST00000639300 PTCH1Q13635 1447 aa16.34■□□□□ 0.21
SCARB2-216ENST00000639300 TBCAO75347 108 aaKnown RBP16.33■□□□□ 0.21
SCARB2-216ENST00000639300 GNA11P29992 359 aa16.33■□□□□ 0.21
SCARB2-216ENST00000639300 BCAMP50895 628 aa16.33■□□□□ 0.21
SCARB2-216ENST00000639300 PI4K2BQ8TCG2 481 aa16.33■□□□□ 0.21
SCARB2-216ENST00000639300 CCDC42Q96M95 316 aa16.33■□□□□ 0.21
SCARB2-216ENST00000639300 BCCIPQ9P287 314 aaKnown RBP eCLIP16.33■□□□□ 0.21
SCARB2-216ENST00000639300 LUC7L2Q9Y383 392 aaKnown RBP16.33■□□□□ 0.21
SCARB2-216ENST00000639300 MAP3K4Q9Y6R4 1608 aa16.33■□□□□ 0.21
SCARB2-216ENST00000639300 ERBB3P21860 1342 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 PHKA1P46020 1223 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 WDR78Q5VTH9 848 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.33■□□□□ 0.2
SCARB2-216ENST00000639300 ZBTB38Q8NAP3 1195 aaPredicted RBP16.33■□□□□ 0.2
SCARB2-216ENST00000639300 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.2
SCARB2-216ENST00000639300 A0A087WWV3 80 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 USP17L12C9JPN9 530 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 USP17L21D6R901 530 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 PDIA3P30101 505 aaKnown RBP16.33■□□□□ 0.2
SCARB2-216ENST00000639300 GYG1P46976 350 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 SDR42E1Q8WUS8 393 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 TET3O43151 1660 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 MCM3P25205 808 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 FAM98CQ17RN3 349 aaKnown RBP16.33■□□□□ 0.2
SCARB2-216ENST00000639300 ADALQ6DHV7 355 aa16.33■□□□□ 0.2
SCARB2-216ENST00000639300 IGSF22Q8N9C0 903 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms