RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CTGFP29279 349 aa4.91□□□□□ -1.62
CCDC7-213ENST00000639290 IRX5P78411 483 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-213ENST00000639290 SNX17Q15036 470 aa4.91□□□□□ -1.62
CCDC7-213ENST00000639290 PRR23BQ6ZRT6 265 aa4.91□□□□□ -1.62
CCDC7-213ENST00000639290 FAM43AQ8N2R8 423 aa4.91□□□□□ -1.62
CCDC7-213ENST00000639290 GPR161Q8N6U8 529 aaKnown RBP4.91□□□□□ -1.62
CCDC7-213ENST00000639290 EDAQ92838 391 aa4.91□□□□□ -1.62
CCDC7-213ENST00000639290 ZNF804BA4D1E1 1349 aa4.91□□□□□ -1.62
CCDC7-213ENST00000639290 TMEM8BA6NDV4 472 aa4.91□□□□□ -1.62
CCDC7-213ENST00000639290 BCRP11274 1271 aa4.91□□□□□ -1.62
CCDC7-213ENST00000639290 SSTR3P32745 418 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-213ENST00000639290 MAP3K21Q5TCX8 1036 aa4.91□□□□□ -1.62
CCDC7-213ENST00000639290 ASH1LQ9NR48 2969 aaKnown RBP4.91□□□□□ -1.62
CCDC7-213ENST00000639290 CIZ1Q9ULV3 898 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-213ENST00000639290 EYSQ5T1H1 3165 aa4.91□□□□□ -1.62
CCDC7-213ENST00000639290 FRMPD3Q5JV73 1810 aa4.9□□□□□ -1.62
CCDC7-213ENST00000639290 MMRN1Q13201 1228 aa4.9□□□□□ -1.62
CCDC7-213ENST00000639290 OPTNQ96CV9 577 aa4.9□□□□□ -1.62
CCDC7-213ENST00000639290 POP1Q99575 1024 aaKnown RBP4.9□□□□□ -1.62
CCDC7-213ENST00000639290 CANXP27824 592 aaKnown RBP4.9□□□□□ -1.63
CCDC7-213ENST00000639290 PDAP1Q13442 181 aaKnown RBP4.9□□□□□ -1.63
CCDC7-213ENST00000639290 PARK7Q99497 189 aaKnown RBP4.9□□□□□ -1.63
CCDC7-213ENST00000639290 MTCH2Q9Y6C9 303 aa4.9□□□□□ -1.63
CCDC7-213ENST00000639290 ZNF521Q96K83 1311 aa4.9□□□□□ -1.63
CCDC7-213ENST00000639290 ST20-MTHFSA0A0A6YYL1 179 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 TMEM221A6NGB7 291 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 M0R296 226 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 MAST4O15021 2626 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 ECE2O60344 883 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 PROS1P07225 676 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 FLT3LGP49771 235 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 MTHFSP49914 203 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 RTP1P59025 263 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 SNAPC2Q13487 334 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 SKIV2LQ15477 1246 aaKnown RBP4.89□□□□□ -1.63
CCDC7-213ENST00000639290 MPHOSPH9Q99550 1183 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 PBX4Q9BYU1 374 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 MTIF3Q9H2K0 278 aaKnown RBP4.89□□□□□ -1.63
CCDC7-213ENST00000639290 SLC45A1Q9Y2W3 748 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 SPTBN4Q9H254 2564 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 PLXNA1Q9UIW2 1896 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 COL4A4P53420 1690 aaPredicted RBP4.89□□□□□ -1.63
CCDC7-213ENST00000639290 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.89□□□□□ -1.63
CCDC7-213ENST00000639290 A0A1B0GUL7 405 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 PSEN1P49768 467 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 RIPPLY3P57055 190 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 SHC2P98077 582 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 LRSAM1Q6UWE0 723 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 DZIP3Q86Y13 1208 aaKnown RBP4.89□□□□□ -1.63
CCDC7-213ENST00000639290 BADQ92934 168 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 CLMNQ96JQ2 1002 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 HNRNPABQ99729 332 aaKnown RBP4.89□□□□□ -1.63
CCDC7-213ENST00000639290 RTKNQ9BST9 563 aa4.89□□□□□ -1.63
CCDC7-213ENST00000639290 SETXQ7Z333 2677 aaKnown RBP4.89□□□□□ -1.63
CCDC7-213ENST00000639290 ABCC12Q96J65 1359 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 RLFQ13129 1914 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 SPDYE5A6NIY4 337 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 KIAA0355O15063 1070 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 MSCO60682 206 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 GTF2E1P29083 439 aaPredicted RBP4.88□□□□□ -1.63
CCDC7-213ENST00000639290 FPGSQ05932 587 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 WASHC4Q2M389 1173 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 C1orf141Q5JVX7 400 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 TRIM67Q6ZTA4 783 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 NFATC2IPQ8NCF5 419 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 COA7Q96BR5 231 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 SLC52A2Q9HAB3 445 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 FAM86C1Q9NVL1 165 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 GRXCR2A6NFK2 248 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 DCDC2CA8MYV0 355 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 PRR5-ARHGAP8B1AHC4 643 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 BTBD19C9JJ37 291 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 ARHGAP8P85298 464 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 PBXIP1Q96AQ6 731 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 ZBED3Q96IU2 234 aaPredicted RBP4.88□□□□□ -1.63
CCDC7-213ENST00000639290 SLC28A3Q9HAS3 691 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.88□□□□□ -1.63
CCDC7-213ENST00000639290 GABRQQ9UN88 632 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 TBC1D2BQ9UPU7 963 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 ZNF462Q96JM2 2506 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 PHIPQ8WWQ0 1821 aa4.88□□□□□ -1.63
CCDC7-213ENST00000639290 DNM1LO00429 736 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 MAP2K5Q13163 448 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 PPIL2Q13356 520 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 HSP90AB2PQ58FF8 381 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 SLC10A5Q5PT55 438 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 ADHFE1Q8IWW8 467 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 DCAF11Q8TEB1 546 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 PDLIM7Q9NR12 457 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 CACNA2D2Q9NY47 1150 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 NIP7Q9Y221 180 aaKnown RBP eCLIP4.87□□□□□ -1.63
CCDC7-213ENST00000639290 SOWAHBA6NEL2 793 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 SNPHO15079 494 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 USP2O75604 605 aaPredicted RBP4.87□□□□□ -1.63
CCDC7-213ENST00000639290 ELNP15502 786 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 PSRC1Q6PGN9 363 aaPredicted RBP4.87□□□□□ -1.63
CCDC7-213ENST00000639290 KDF1Q8NAX2 398 aaPredicted RBP4.87□□□□□ -1.63
CCDC7-213ENST00000639290 PCDHA11Q9Y5I1 949 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 ACACBO00763 2458 aa4.87□□□□□ -1.63
CCDC7-213ENST00000639290 HEG1Q9ULI3 1381 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms