RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 PRDM1O75626 825 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 ADGRA1Q86SQ6 560 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 COA1Q9GZY4 146 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 KLF18A0A0U1RQI7 1052 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 GSG1L2A8MUP6 293 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 COL9A3Q14050 684 aaPredicted RBP15.66■□□□□ 0.1
SCN8A-215ENST00000638820 TMEM67Q5HYA8 995 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 MCTP1Q6DN14 999 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 CPLX2Q6PUV4 134 aaKnown RBP15.66■□□□□ 0.1
SCN8A-215ENST00000638820 ZKSCAN3Q9BRR0 538 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 GZF1Q9H116 711 aaPredicted RBP15.66■□□□□ 0.1
SCN8A-215ENST00000638820 KIF3AQ9Y496 699 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 GOLGA8BA8MQT2 603 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 PKP1Q13835 747 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 TSGA10IPQ3SY00 556 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 INCENPQ9NQS7 918 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 TTF2Q9UNY4 1162 aaKnown RBP15.66■□□□□ 0.1
SCN8A-215ENST00000638820 CCDC69A6NI79 296 aa15.65■□□□□ 0.1
SCN8A-215ENST00000638820 SCNN1DP51172 638 aa15.65■□□□□ 0.1
SCN8A-215ENST00000638820 KCNB2Q92953 911 aa15.65■□□□□ 0.1
SCN8A-215ENST00000638820 AKNAD1Q5T1N1 836 aa15.65■□□□□ 0.1
SCN8A-215ENST00000638820 MICU3Q86XE3 530 aa15.65■□□□□ 0.1
SCN8A-215ENST00000638820 KRT23Q9C075 422 aa15.65■□□□□ 0.1
SCN8A-215ENST00000638820 CNNM2Q9H8M5 875 aa15.65■□□□□ 0.1
SCN8A-215ENST00000638820 MTMR7Q9Y216 660 aa15.65■□□□□ 0.1
SCN8A-215ENST00000638820 CYP2D7A0A087X1C5 515 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 STYK1Q6J9G0 422 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 CCDC144CPQ8IYA2 1237 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 TEX11Q8IYF3 940 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 TGFBRAP1Q8WUH2 860 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 NUP133Q8WUM0 1156 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 PODXL2Q9NZ53 605 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 KLRG2A4D1S0 409 aaPredicted RBP15.64■□□□□ 0.09
SCN8A-215ENST00000638820 MCM4P33991 863 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 PPARAQ07869 468 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 PICALMQ13492 652 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 KIAA0825Q8IV33 1275 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 LARGE2Q8N3Y3 721 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 CHMP4CQ96CF2 233 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 MKNK2Q9HBH9 465 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 EPB41L4AQ9HCS5 686 aaPredicted RBP15.64■□□□□ 0.09
SCN8A-215ENST00000638820 GPHNQ9NQX3 736 aaPredicted RBP15.64■□□□□ 0.09
SCN8A-215ENST00000638820 DDX11L8A8MPP1 907 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 PDCP20941 246 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 CUL4AQ13619 759 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 TBC1D10CQ8IV04 446 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 MAPKAPK5Q8IW41 473 aa15.64■□□□□ 0.09
SCN8A-215ENST00000638820 NCOA5Q9HCD5 579 aaKnown RBP15.64■□□□□ 0.09
SCN8A-215ENST00000638820 SAP30BPQ9UHR5 308 aaKnown RBP15.64■□□□□ 0.09
SCN8A-215ENST00000638820 WDR33Q9C0J8 1336 aaKnown RBP15.64■□□□□ 0.09
SCN8A-215ENST00000638820 RXRAP19793 462 aa15.63■□□□□ 0.09
SCN8A-215ENST00000638820 BTDP43251 543 aa15.63■□□□□ 0.09
SCN8A-215ENST00000638820 RPAP1Q9BWH6 1393 aaPredicted RBP15.63■□□□□ 0.09
SCN8A-215ENST00000638820 DHX16O60231 1041 aaKnown RBP15.63■□□□□ 0.09
SCN8A-215ENST00000638820 TOB2Q14106 344 aaPredicted RBP15.63■□□□□ 0.09
SCN8A-215ENST00000638820 RAB3GAP1Q15042 981 aa15.63■□□□□ 0.09
SCN8A-215ENST00000638820 AOC3Q16853 763 aa15.63■□□□□ 0.09
SCN8A-215ENST00000638820 FERMT3Q86UX7 667 aa15.63■□□□□ 0.09
SCN8A-215ENST00000638820 IQCA1Q86XH1 822 aa15.63■□□□□ 0.09
SCN8A-215ENST00000638820 ESR2Q92731 530 aa15.63■□□□□ 0.09
SCN8A-215ENST00000638820 DPEP1P16444 411 aa15.62■□□□□ 0.09
SCN8A-215ENST00000638820 COL4A1P02462 1669 aa15.62■□□□□ 0.09
SCN8A-215ENST00000638820 ZSCAN29Q8IWY8 852 aaPredicted RBP15.62■□□□□ 0.09
SCN8A-215ENST00000638820 BCS1LQ9Y276 419 aa15.62■□□□□ 0.09
SCN8A-215ENST00000638820 TSPY2A6NKD2 308 aa15.62■□□□□ 0.09
SCN8A-215ENST00000638820 PDE4BQ07343 736 aa15.62■□□□□ 0.09
SCN8A-215ENST00000638820 CCDC82Q8N4S0 544 aa15.62■□□□□ 0.09
SCN8A-215ENST00000638820 MXD3Q9BW11 206 aa15.62■□□□□ 0.09
SCN8A-215ENST00000638820 ISY1Q9ULR0 285 aaKnown RBP15.62■□□□□ 0.09
SCN8A-215ENST00000638820 SLC12A7Q9Y666 1083 aa15.62■□□□□ 0.09
SCN8A-215ENST00000638820 TUBGCP6Q96RT7 1819 aa15.61■□□□□ 0.09
SCN8A-215ENST00000638820 STX6O43752 255 aa15.61■□□□□ 0.09
SCN8A-215ENST00000638820 PLCG2P16885 1265 aa15.61■□□□□ 0.09
SCN8A-215ENST00000638820 CCDC93Q567U6 631 aa15.61■□□□□ 0.09
SCN8A-215ENST00000638820 SUPT20HQ8NEM7 779 aa15.61■□□□□ 0.09
SCN8A-215ENST00000638820 ANGEL1Q9UNK9 670 aaKnown RBP15.61■□□□□ 0.09
SCN8A-215ENST00000638820 GOLGB1Q14789 3259 aaKnown RBP15.61■□□□□ 0.09
SCN8A-215ENST00000638820 TNRC6CQ9HCJ0 1690 aaKnown RBP15.61■□□□□ 0.09
SCN8A-215ENST00000638820 GRIK5Q16478 980 aa15.61■□□□□ 0.09
SCN8A-215ENST00000638820 ATP6V1DQ9Y5K8 247 aa15.61■□□□□ 0.09
SCN8A-215ENST00000638820 AKAP11Q9UKA4 1901 aa15.61■□□□□ 0.09
SCN8A-215ENST00000638820 WTAPQ15007 396 aa15.61■□□□□ 0.09
SCN8A-215ENST00000638820 CC2D2BQ6DHV5 1058 aa15.61■□□□□ 0.09
SCN8A-215ENST00000638820 GNL2Q13823 731 aaKnown RBP15.6■□□□□ 0.09
SCN8A-215ENST00000638820 ALX1Q15699 326 aa15.6■□□□□ 0.09
SCN8A-215ENST00000638820 PODNQ7Z5L7 613 aa15.6■□□□□ 0.09
SCN8A-215ENST00000638820 SH3RF3Q8TEJ3 882 aaPredicted RBP15.6■□□□□ 0.09
SCN8A-215ENST00000638820 RIOK1Q9BRS2 568 aaKnown RBP15.6■□□□□ 0.09
SCN8A-215ENST00000638820 ATP8A2Q9NTI2 1148 aa15.6■□□□□ 0.09
SCN8A-215ENST00000638820 LRP5O75197 1615 aa15.6■□□□□ 0.09
SCN8A-215ENST00000638820 FOXP2O15409 715 aa15.6■□□□□ 0.09
SCN8A-215ENST00000638820 JAK2O60674 1132 aa15.6■□□□□ 0.09
SCN8A-215ENST00000638820 SYT1P21579 422 aa15.6■□□□□ 0.09
SCN8A-215ENST00000638820 PIM2Q9P1W9 311 aa15.6■□□□□ 0.09
SCN8A-215ENST00000638820 DDX49Q9Y6V7 483 aaKnown RBP15.6■□□□□ 0.09
SCN8A-215ENST00000638820 NEDD4P46934 1319 aa15.6■□□□□ 0.09
SCN8A-215ENST00000638820 ECE2O60344 883 aa15.59■□□□□ 0.09
SCN8A-215ENST00000638820 USP17L8P0C7I0 530 aa15.59■□□□□ 0.09
SCN8A-215ENST00000638820 IL1R1P14778 569 aa15.59■□□□□ 0.09
SCN8A-215ENST00000638820 METAP2P50579 478 aaKnown RBP eCLIP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms