RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 TNNI3KQ59H18 835 aa20.63■□□□□ 0.89
CACNA1A-259ENST00000638114 SPATA5Q8NB90 893 aa20.63■□□□□ 0.89
CACNA1A-259ENST00000638114 GPR108Q9NPR9 543 aa20.63■□□□□ 0.89
CACNA1A-259ENST00000638114 HMG20BQ9P0W2 317 aa20.63■□□□□ 0.89
CACNA1A-259ENST00000638114 FPGT-TNNI3KV9GXZ4 949 aa20.63■□□□□ 0.89
CACNA1A-259ENST00000638114 MANSC4A6NHS7 340 aaPredicted RBP20.62■□□□□ 0.89
CACNA1A-259ENST00000638114 ARID4AP29374 1257 aaPredicted RBP20.62■□□□□ 0.89
CACNA1A-259ENST00000638114 PI16Q6UXB8 463 aa20.62■□□□□ 0.89
CACNA1A-259ENST00000638114 SLF2Q8IX21 1173 aa20.62■□□□□ 0.89
CACNA1A-259ENST00000638114 HOOK2Q96ED9 719 aa20.62■□□□□ 0.89
CACNA1A-259ENST00000638114 ELP3Q9H9T3 547 aa20.62■□□□□ 0.89
CACNA1A-259ENST00000638114 USP40Q9NVE5 1235 aa20.62■□□□□ 0.89
CACNA1A-259ENST00000638114 COG6Q9Y2V7 657 aa20.62■□□□□ 0.89
CACNA1A-259ENST00000638114 NOP58Q9Y2X3 529 aaKnown RBP20.62■□□□□ 0.89
CACNA1A-259ENST00000638114 RPAP1Q9BWH6 1393 aaPredicted RBP20.61■□□□□ 0.89
CACNA1A-259ENST00000638114 UQCRFS1P1P0C7P4 283 aa20.61■□□□□ 0.89
CACNA1A-259ENST00000638114 TCP10Q12799 353 aa20.61■□□□□ 0.89
CACNA1A-259ENST00000638114 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
CACNA1A-259ENST00000638114 FAM151AQ8WW52 585 aa20.61■□□□□ 0.89
CACNA1A-259ENST00000638114 GAKO14976 1311 aa20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 TBC1D8O95759 1140 aa20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 MCAMP43121 646 aa20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 MAP3K9P80192 1104 aa20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 NFIAQ12857 509 aa20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 TTC39AQ5SRH9 613 aa20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 ABHD8Q96I13 439 aa20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 DBNDD2Q9BQY9 259 aa20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 DDX19BQ9UMR2 479 aa20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 CSADQ9Y600 493 aa20.6■□□□□ 0.89
CACNA1A-259ENST00000638114 AK9Q5TCS8 1911 aa20.59■□□□□ 0.89
CACNA1A-259ENST00000638114 GJA5P36382 358 aa20.59■□□□□ 0.89
CACNA1A-259ENST00000638114 INHBEP58166 350 aa20.59■□□□□ 0.89
CACNA1A-259ENST00000638114 MECOMQ03112 1051 aa20.59■□□□□ 0.89
CACNA1A-259ENST00000638114 VGLL4Q14135 290 aa20.59■□□□□ 0.89
CACNA1A-259ENST00000638114 CCDC158Q5M9N0 1113 aa20.59■□□□□ 0.89
CACNA1A-259ENST00000638114 DCAF15Q66K64 600 aa20.59■□□□□ 0.89
CACNA1A-259ENST00000638114 TBC1D9Q6ZT07 1266 aa20.59■□□□□ 0.89
CACNA1A-259ENST00000638114 OPTNQ96CV9 577 aa20.59■□□□□ 0.89
CACNA1A-259ENST00000638114 MROH7-TTC4A0A0A0MT08 1334 aa20.58■□□□□ 0.89
CACNA1A-259ENST00000638114 DGKZQ13574 1117 aa20.58■□□□□ 0.89
CACNA1A-259ENST00000638114 WRNIP1Q96S55 665 aa20.58■□□□□ 0.89
CACNA1A-259ENST00000638114 MCOLN1Q9GZU1 580 aa20.58■□□□□ 0.89
CACNA1A-259ENST00000638114 RAI14Q9P0K7 980 aa20.58■□□□□ 0.89
CACNA1A-259ENST00000638114 FAM198AQ9UFP1 575 aa20.58■□□□□ 0.89
CACNA1A-259ENST00000638114 EXOC6BQ9Y2D4 811 aa20.58■□□□□ 0.89
CACNA1A-259ENST00000638114 LAMB1P07942 1786 aa20.57■□□□□ 0.88
CACNA1A-259ENST00000638114 BTDP43251 543 aa20.57■□□□□ 0.88
CACNA1A-259ENST00000638114 MIGA2Q7L4E1 593 aa20.57■□□□□ 0.88
CACNA1A-259ENST00000638114 CNKSR2Q8WXI2 1034 aa20.57■□□□□ 0.88
CACNA1A-259ENST00000638114 FAM163AQ96GL9 167 aaPredicted RBP20.57■□□□□ 0.88
CACNA1A-259ENST00000638114 SNRKQ9NRH2 765 aa20.57■□□□□ 0.88
CACNA1A-259ENST00000638114 ALDH1A1P00352 501 aa20.56■□□□□ 0.88
CACNA1A-259ENST00000638114 RGS3P49796 1198 aa20.56■□□□□ 0.88
CACNA1A-259ENST00000638114 GSTO1P78417 241 aa20.56■□□□□ 0.88
CACNA1A-259ENST00000638114 IFNL1Q8IU54 200 aa20.56■□□□□ 0.88
CACNA1A-259ENST00000638114 ERC1Q8IUD2 1116 aa20.56■□□□□ 0.88
CACNA1A-259ENST00000638114 ZNF341Q9BYN7 854 aa20.56■□□□□ 0.88
CACNA1A-259ENST00000638114 CCDC8Q9H0W5 538 aaPredicted RBP20.56■□□□□ 0.88
CACNA1A-259ENST00000638114 LRP2BPQ9P2M1 347 aa20.56■□□□□ 0.88
CACNA1A-259ENST00000638114 IGF2BP3O00425 579 aaKnown RBP eCLIP20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 LDHCP07864 332 aa20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 ZNF384Q8TF68 577 aa20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 ZKSCAN4Q969J2 545 aaPredicted RBP20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 NSUN4Q96CB9 384 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 EAF2Q96CJ1 260 aaPredicted RBP20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 OTUD5Q96G74 571 aa20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 IDI2Q9BXS1 227 aa20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 CHMP4BQ9H444 224 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 ZBTB40Q9NUA8 1239 aa20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 TLR7Q9NYK1 1049 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 DBNLQ9UJU6 430 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 SNCAIPQ9Y6H5 919 aa20.55■□□□□ 0.88
CACNA1A-259ENST00000638114 ENTPD3O75355 529 aa20.54■□□□□ 0.88
CACNA1A-259ENST00000638114 HSP90AB4PQ58FF6 505 aa20.54■□□□□ 0.88
CACNA1A-259ENST00000638114 ZFPM1Q8IX07 1006 aa20.54■□□□□ 0.88
CACNA1A-259ENST00000638114 RPAP2Q8IXW5 612 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-259ENST00000638114 ZNF296Q8WUU4 475 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-259ENST00000638114 RFX7Q2KHR2 1363 aa20.54■□□□□ 0.88
CACNA1A-259ENST00000638114 GPR75-ASB3A0A0A6YYF3 556 aa20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 SPDYE5A6NIY4 337 aa20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 GPR25O00155 361 aa20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 HMMRO75330 724 aa20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 PICALMQ13492 652 aa20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 C20orf194Q5TEA3 1177 aa20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 OTUD7BQ6GQQ9 843 aa20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 ZSCAN29Q8IWY8 852 aaPredicted RBP20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 ZNF512BQ96KM6 892 aaPredicted RBP20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 CFHR5Q9BXR6 569 aa20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 DOCK2Q92608 1830 aa20.53■□□□□ 0.88
CACNA1A-259ENST00000638114 WDHD1O75717 1129 aaPredicted RBP20.52■□□□□ 0.88
CACNA1A-259ENST00000638114 INPP5BP32019 993 aa20.52■□□□□ 0.88
CACNA1A-259ENST00000638114 PDE3AQ14432 1141 aa20.52■□□□□ 0.88
CACNA1A-259ENST00000638114 AACSQ86V21 672 aa20.52■□□□□ 0.88
CACNA1A-259ENST00000638114 ERO1BQ86YB8 467 aa20.52■□□□□ 0.88
CACNA1A-259ENST00000638114 R3HDMLQ9H3Y0 253 aa20.52■□□□□ 0.88
CACNA1A-259ENST00000638114 DDX4Q9NQI0 724 aaKnown RBP20.52■□□□□ 0.88
CACNA1A-259ENST00000638114 MAST2Q6P0Q8 1798 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms