RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 CALM2P0DP24 149 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 CALM3P0DP25 149 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 NOP14P78316 857 aaKnown RBP16.82■□□□□ 0.28
UBE3A-227ENST00000638011 TRIM60Q495X7 471 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 RUNDC3BQ96NL0 473 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 DNAJC25Q9H1X3 360 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 MMRN2Q9H8L6 949 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 IFNKQ9P0W0 207 aa16.82■□□□□ 0.28
UBE3A-227ENST00000638011 TRIM75PA6NK02 468 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 CAPS2Q9BXY5 557 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 GGNBP2Q9H3C7 697 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 IFIT5Q13325 482 aaKnown RBP16.81■□□□□ 0.28
UBE3A-227ENST00000638011 AGTPBP1Q9UPW5 1226 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 IL16Q14005 1332 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 CCDC93Q567U6 631 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 CCDC51Q96ER9 411 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 RBSNQ9H1K0 784 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 E9PMD0 336 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 RIOK3O14730 519 aaKnown RBP16.81■□□□□ 0.28
UBE3A-227ENST00000638011 WDR46O15213 610 aaKnown RBP16.81■□□□□ 0.28
UBE3A-227ENST00000638011 ASIC1P78348 528 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 NMIQ13287 307 aaPredicted RBP16.81■□□□□ 0.28
UBE3A-227ENST00000638011 A0A1B0GW55 424 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 DUX4L2P0CJ85 424 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 DUX4L3P0CJ86 424 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 DUX4L4P0CJ87 422 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 DUX4L5P0CJ88 424 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 DUX4L6P0CJ89 424 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 DUX4L7P0CJ90 424 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 CUL4BQ13620 913 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 CCDC89Q8N998 374 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 TXLNGQ9NUQ3 528 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 GIMAP4Q9NUV9 329 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 DUX4Q9UBX2 424 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 B4DLN1 442 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 RAP1GDS1P52306 607 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 MRPL12P52815 198 aaKnown RBP16.81■□□□□ 0.28
UBE3A-227ENST00000638011 FAM160A1Q05DH4 1040 aa16.81■□□□□ 0.28
UBE3A-227ENST00000638011 ARHGAP42A6NI28 874 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
UBE3A-227ENST00000638011 DACT3Q96B18 629 aaPredicted RBP16.8■□□□□ 0.28
UBE3A-227ENST00000638011 RILPQ96NA2 401 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 TFIP11Q9UBB9 837 aaKnown RBP16.8■□□□□ 0.28
UBE3A-227ENST00000638011 CNPY2Q9Y2B0 182 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 MYO18AQ92614 2054 aaKnown RBP16.8■□□□□ 0.28
UBE3A-227ENST00000638011 ZBTB43O43298 467 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 SLC8A3P57103 927 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 CNNM4Q6P4Q7 775 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 TRIM58Q8NG06 486 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 YY1AP1Q9H869 796 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 ABCF2Q9UG63 623 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 LMNAP02545 664 aaKnown RBP16.8■□□□□ 0.28
UBE3A-227ENST00000638011 LMNB1P20700 586 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 ZNF445P59923 1031 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 LIN9Q5TKA1 542 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 NBPF6Q5VWK0 638 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 NBPF4Q96M43 638 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 ZNF830Q96NB3 372 aaPredicted RBP16.8■□□□□ 0.28
UBE3A-227ENST00000638011 GDPD2Q9HCC8 539 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 ELF2Q15723 593 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 FAM204AQ9H8W3 233 aa16.8■□□□□ 0.28
UBE3A-227ENST00000638011 APOEP02649 317 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 NUCB1Q02818 461 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 DIXDC1Q155Q3 683 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 SLC9C1Q4G0N8 1177 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 MICU3Q86XE3 530 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 CCT2P78371 535 aaKnown RBP16.79■□□□□ 0.28
UBE3A-227ENST00000638011 GDAP1L1Q96MZ0 367 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 VGLL3A8MV65 326 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 CREB3O43889 395 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 KIFC3Q9BVG8 833 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 C6orf50Q9HD87 102 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 SAMM50Q9Y512 469 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 ARHGEF9O43307 516 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 STX2P32856 288 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 KRT71Q3SY84 523 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 HEATR3Q7Z4Q2 680 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 IL1RAPL2Q9NP60 686 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 PSPC1Q8WXF1 523 aaKnown RBP16.79■□□□□ 0.28
UBE3A-227ENST00000638011 PTPN23Q9H3S7 1636 aa16.79■□□□□ 0.28
UBE3A-227ENST00000638011 U2AF2P26368 475 aaKnown RBP eCLIP16.79■□□□□ 0.283e-9■■■■□ 26.5
UBE3A-227ENST00000638011 MORC4Q8TE76 937 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 DCAF8L1A6NGE4 600 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 EPB41P11171 864 aaKnown RBP16.78■□□□□ 0.28
UBE3A-227ENST00000638011 GFAPP14136 432 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 ZGPATQ8N5A5 531 aaKnown RBP16.78■□□□□ 0.28
UBE3A-227ENST00000638011 ESR2Q92731 530 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 CCDC169A6NNP5 214 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 GNA11P29992 359 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 LRRC43Q8N309 656 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 NAP1L4Q99733 375 aaKnown RBP16.78■□□□□ 0.28
UBE3A-227ENST00000638011 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.78■□□□□ 0.28
UBE3A-227ENST00000638011 STX10O60499 249 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 WTAPQ15007 396 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 LEO1Q8WVC0 666 aaPredicted RBP16.78■□□□□ 0.28
UBE3A-227ENST00000638011 PANK2Q9BZ23 570 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 ANGPTL3Q9Y5C1 460 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 PSMD6Q15008 389 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 SPZ1Q9BXG8 430 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms