RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 SLC15A2Q16348 729 aa25.55■■□□□ 1.68
CHRNA7-228ENST00000637519 CDC37L1Q7L3B6 337 aa25.54■■□□□ 1.68
CHRNA7-228ENST00000637519 C6orf229H3BNL8 230 aa25.54■■□□□ 1.68
CHRNA7-228ENST00000637519 SENP2Q9HC62 589 aa25.54■■□□□ 1.68
CHRNA7-228ENST00000637519 LRRC37AA6NMS7 1700 aa25.53■■□□□ 1.68
CHRNA7-228ENST00000637519 TIAM2Q8IVF5 1701 aa25.53■■□□□ 1.68
CHRNA7-228ENST00000637519 CYP2D7A0A087X1C5 515 aa25.53■■□□□ 1.68
CHRNA7-228ENST00000637519 KLF18A0A0U1RQI7 1052 aa25.53■■□□□ 1.68
CHRNA7-228ENST00000637519 DZIP1Q86YF9 867 aaKnown RBP25.53■■□□□ 1.68
CHRNA7-228ENST00000637519 NSUN7Q8NE18 718 aaKnown RBP25.53■■□□□ 1.68
CHRNA7-228ENST00000637519 PDGFDQ9GZP0 370 aaPredicted RBP25.53■■□□□ 1.68
CHRNA7-228ENST00000637519 CD209Q9NNX6 404 aa25.53■■□□□ 1.68
CHRNA7-228ENST00000637519 MINDY4BA8MYZ0 360 aa25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 EVX2Q03828 476 aa25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 RRP12Q5JTH9 1297 aaKnown RBP25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 DEFB132Q7Z7B7 95 aa25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 PODXL2Q9NZ53 605 aa25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 DDX49Q9Y6V7 483 aaKnown RBP25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 LTBP1Q14766 1721 aa25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 MAST2Q6P0Q8 1798 aa25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 FOSBP53539 338 aa25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 C15orf52Q6ZUT6 534 aaKnown RBP25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 FERMT3Q86UX7 667 aa25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 TOMM22Q9NS69 142 aa25.52■■□□□ 1.68
CHRNA7-228ENST00000637519 PTPDC1A2A3K4 754 aa25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 GOLGA8BA8MQT2 603 aa25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 KDM4AO75164 1064 aa25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 NPR1P16066 1061 aa25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 DIXDC1Q155Q3 683 aa25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 AKNAD1Q5T1N1 836 aa25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 FBXL16Q8N461 479 aa25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 ZNF274Q96GC6 653 aaPredicted RBP25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 RIMBP2O15034 1052 aa25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 PPARAQ07869 468 aa25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 ATP6V0A2Q9Y487 856 aa25.51■■□□□ 1.67
CHRNA7-228ENST00000637519 CHD4Q14839 1912 aa25.5■■□□□ 1.67
CHRNA7-228ENST00000637519 LDHBP07195 334 aaKnown RBP25.5■■□□□ 1.67
CHRNA7-228ENST00000637519 PTMSP20962 102 aa25.5■■□□□ 1.67
CHRNA7-228ENST00000637519 PDE6BP35913 854 aa25.5■■□□□ 1.67
CHRNA7-228ENST00000637519 SP8Q8IXZ3 490 aa25.5■■□□□ 1.67
CHRNA7-228ENST00000637519 WDR66Q8TBY9 1149 aa25.5■■□□□ 1.67
CHRNA7-228ENST00000637519 STK32BQ9NY57 414 aa25.5■■□□□ 1.67
CHRNA7-228ENST00000637519 HPS5Q9UPZ3 1129 aa25.5■■□□□ 1.67
CHRNA7-228ENST00000637519 CNPY2Q9Y2B0 182 aa25.5■■□□□ 1.67
CHRNA7-228ENST00000637519 SH2B2O14492 632 aaPredicted RBP25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 EVCP57679 992 aa25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 MFSD6Q6ZSS7 791 aa25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 SMARCC2Q8TAQ2 1214 aa25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 ZSWIM5Q9P217 1185 aa25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 BAZ2AQ9UIF9 1905 aaKnown RBP25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 SALL1Q9NSC2 1324 aa25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 RXRAP19793 462 aa25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 ZNF622Q969S3 477 aaKnown RBP eCLIP25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 ZKSCAN3Q9BRR0 538 aa25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 DUOX1Q9NRD9 1551 aa25.49■■□□□ 1.67
CHRNA7-228ENST00000637519 WDR19Q8NEZ3 1342 aa25.48■■□□□ 1.67
CHRNA7-228ENST00000637519 NCLP19338 710 aaKnown RBP25.48■■□□□ 1.67
CHRNA7-228ENST00000637519 SKOR2Q2VWA4 1001 aaPredicted RBP25.48■■□□□ 1.67
CHRNA7-228ENST00000637519 GPT2Q8TD30 523 aa25.48■■□□□ 1.67
CHRNA7-228ENST00000637519 STAG1Q8WVM7 1258 aa25.48■■□□□ 1.67
CHRNA7-228ENST00000637519 ANGEL1Q9UNK9 670 aaKnown RBP25.48■■□□□ 1.67
CHRNA7-228ENST00000637519 SLC4A8Q2Y0W8 1093 aa25.48■■□□□ 1.67
CHRNA7-228ENST00000637519 FAM173BQ6P4H8 233 aa25.48■■□□□ 1.67
CHRNA7-228ENST00000637519 IL1R1P14778 569 aa25.47■■□□□ 1.67
CHRNA7-228ENST00000637519 SPTY2D1Q68D10 685 aaPredicted RBP25.47■■□□□ 1.67
CHRNA7-228ENST00000637519 MASTLQ96GX5 879 aa25.47■■□□□ 1.67
CHRNA7-228ENST00000637519 CCDC88AQ3V6T2 1871 aa25.47■■□□□ 1.67
CHRNA7-228ENST00000637519 PDCP20941 246 aa25.46■■□□□ 1.67
CHRNA7-228ENST00000637519 DNM1Q05193 864 aaKnown RBP25.46■■□□□ 1.67
CHRNA7-228ENST00000637519 KLHL40Q2TBA0 621 aa25.46■■□□□ 1.67
CHRNA7-228ENST00000637519 C2CD5Q86YS7 1000 aa25.46■■□□□ 1.67
CHRNA7-228ENST00000637519 IGDCC4Q8TDY8 1250 aa25.46■■□□□ 1.67
CHRNA7-228ENST00000637519 CHRNA5P30532 468 aa25.46■■□□□ 1.67
CHRNA7-228ENST00000637519 FAM184AQ8NB25 1140 aa25.46■■□□□ 1.67
CHRNA7-228ENST00000637519 LLPHQ9BRT6 129 aaKnown RBP25.46■■□□□ 1.67
CHRNA7-228ENST00000637519 MYL10Q9BUA6 226 aa25.46■■□□□ 1.67
CHRNA7-228ENST00000637519 TPRNQ4KMQ1 711 aa25.45■■□□□ 1.66
CHRNA7-228ENST00000637519 TMEM67Q5HYA8 995 aa25.45■■□□□ 1.66
CHRNA7-228ENST00000637519 CTR9Q6PD62 1173 aa25.45■■□□□ 1.66
CHRNA7-228ENST00000637519 TMC4Q7Z404 712 aa25.45■■□□□ 1.66
CHRNA7-228ENST00000637519 LY9Q9HBG7 655 aa25.45■■□□□ 1.66
CHRNA7-228ENST00000637519 DCP1AQ9NPI6 582 aaPredicted RBP25.45■■□□□ 1.66
CHRNA7-228ENST00000637519 USP17L12C9JPN9 530 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 USP17L21D6R901 530 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 ZBTB22O15209 634 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 GADD45BO75293 160 aaPredicted RBP25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 USP48Q86UV5 1035 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 CCDC144CPQ8IYA2 1237 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 CRNKL1Q9BZJ0 848 aaKnown RBP25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 CNNM2Q9H8M5 875 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 ZNF219Q9P2Y4 722 aaPredicted RBP25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 TCHHQ07283 1943 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 FIBPO43427 364 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 PRDM1O75626 825 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 CYP2D6P10635 497 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 ALDH1B1P30837 517 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 MPNDQ8N594 471 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 KRT23Q9C075 422 aa25.44■■□□□ 1.66
CHRNA7-228ENST00000637519 IFIT3O14879 490 aaKnown RBP25.43■■□□□ 1.66
CHRNA7-228ENST00000637519 MICU3Q86XE3 530 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms