RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 PPFIA3O75145 1194 aa18.72■□□□□ 0.59
CACNA1A-231ENST00000636816 F13A1P00488 732 aa18.72■□□□□ 0.59
CACNA1A-231ENST00000636816 RAB11FIP4Q86YS3 637 aa18.72■□□□□ 0.59
CACNA1A-231ENST00000636816 ZNF274Q96GC6 653 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-231ENST00000636816 CD209Q9NNX6 404 aa18.72■□□□□ 0.59
CACNA1A-231ENST00000636816 PODXL2Q9NZ53 605 aa18.72■□□□□ 0.59
CACNA1A-231ENST00000636816 EVCP57679 992 aa18.71■□□□□ 0.59
CACNA1A-231ENST00000636816 SP8Q8IXZ3 490 aa18.71■□□□□ 0.59
CACNA1A-231ENST00000636816 SENP2Q9HC62 589 aa18.71■□□□□ 0.59
CACNA1A-231ENST00000636816 GDPD2Q9HCC8 539 aa18.71■□□□□ 0.59
CACNA1A-231ENST00000636816 AATFQ9NY61 560 aaKnown RBP eCLIP18.71■□□□□ 0.59
CACNA1A-231ENST00000636816 COL11A2P13942 1736 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 C6orf229H3BNL8 230 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 NPR1P16066 1061 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 PTMSP20962 102 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 AKNAD1Q5T1N1 836 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 NSUN7Q8NE18 718 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 CYP2D7A0A087X1C5 515 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 KLF18A0A0U1RQI7 1052 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 MINDY4BA8MYZ0 360 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 ZBTB22O15209 634 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 SKOR2Q2VWA4 1001 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 CDC37L1Q7L3B6 337 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 SMARCC2Q8TAQ2 1214 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 ZSWIM5Q9P217 1185 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 HPS5Q9UPZ3 1129 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 ATP6V0A2Q9Y487 856 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 DDX49Q9Y6V7 483 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 LRRC37AA6NMS7 1700 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 LTBP1Q14766 1721 aa18.7■□□□□ 0.58
CACNA1A-231ENST00000636816 PDE6BP35913 854 aa18.69■□□□□ 0.58
CACNA1A-231ENST00000636816 PPARAQ07869 468 aa18.69■□□□□ 0.58
CACNA1A-231ENST00000636816 WDR66Q8TBY9 1149 aa18.69■□□□□ 0.58
CACNA1A-231ENST00000636816 PDGFDQ9GZP0 370 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-231ENST00000636816 WDR19Q8NEZ3 1342 aa18.69■□□□□ 0.58
CACNA1A-231ENST00000636816 KDM4AO75164 1064 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 EVX2Q03828 476 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 RRP12Q5JTH9 1297 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 MFSD6Q6ZSS7 791 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 SALL1Q9NSC2 1324 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 SH2B2O14492 632 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 RIMBP2O15034 1052 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 LDHBP07195 334 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 IL1R1P14778 569 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 SPTY2D1Q68D10 685 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 DEFB132Q7Z7B7 95 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 FERMT3Q86UX7 667 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 DZIP1Q86YF9 867 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 GPT2Q8TD30 523 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 IGDCC4Q8TDY8 1250 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 STAG1Q8WVM7 1258 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 LLPHQ9BRT6 129 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 STK32BQ9NY57 414 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 CNPY2Q9Y2B0 182 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 TIAM2Q8IVF5 1701 aa18.68■□□□□ 0.58
CACNA1A-231ENST00000636816 MAST2Q6P0Q8 1798 aa18.67■□□□□ 0.58
CACNA1A-231ENST00000636816 PTPDC1A2A3K4 754 aa18.67■□□□□ 0.58
CACNA1A-231ENST00000636816 DIXDC1Q155Q3 683 aa18.67■□□□□ 0.58
CACNA1A-231ENST00000636816 ANGEL1Q9UNK9 670 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-231ENST00000636816 GOLGA8BA8MQT2 603 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 PDCP20941 246 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 ZNF622Q969S3 477 aaKnown RBP eCLIP18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 MASTLQ96GX5 879 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 TOMM22Q9NS69 142 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 ALDH1B1P30837 517 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 FOSBP53539 338 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 KLHL40Q2TBA0 621 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 FAM173BQ6P4H8 233 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 CTR9Q6PD62 1173 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 TMC4Q7Z404 712 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 USP48Q86UV5 1035 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 ZKSCAN3Q9BRR0 538 aa18.66■□□□□ 0.58
CACNA1A-231ENST00000636816 RXRAP19793 462 aa18.65■□□□□ 0.58
CACNA1A-231ENST00000636816 DNM1Q05193 864 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-231ENST00000636816 C2CD5Q86YS7 1000 aa18.65■□□□□ 0.58
CACNA1A-231ENST00000636816 LY9Q9HBG7 655 aa18.65■□□□□ 0.58
CACNA1A-231ENST00000636816 MYH2Q9UKX2 1941 aa18.65■□□□□ 0.58
CACNA1A-231ENST00000636816 USP17L12C9JPN9 530 aa18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 USP17L21D6R901 530 aa18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 GADD45BO75293 160 aaPredicted RBP18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 FDPSP14324 419 aaKnown RBP18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 TMEM67Q5HYA8 995 aa18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 MPNDQ8N594 471 aa18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 FAM184AQ8NB25 1140 aa18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 TMEM87BQ96K49 555 aa18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 KRT23Q9C075 422 aa18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 CNNM2Q9H8M5 875 aa18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 ANAPC4Q9UJX5 808 aa18.64■□□□□ 0.58
CACNA1A-231ENST00000636816 DUOX1Q9NRD9 1551 aa18.64■□□□□ 0.57
CACNA1A-231ENST00000636816 CHRNA5P30532 468 aa18.64■□□□□ 0.57
CACNA1A-231ENST00000636816 CRNKL1Q9BZJ0 848 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-231ENST00000636816 DCP1AQ9NPI6 582 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-231ENST00000636816 KIAA1551Q9HCM1 1747 aa18.63■□□□□ 0.57
CACNA1A-231ENST00000636816 IFIT3O14879 490 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-231ENST00000636816 CYP2D6P10635 497 aa18.63■□□□□ 0.57
CACNA1A-231ENST00000636816 APOA5Q6Q788 366 aa18.62■□□□□ 0.57
CACNA1A-231ENST00000636816 SH3RF3Q8TEJ3 882 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-231ENST00000636816 MYL10Q9BUA6 226 aa18.62■□□□□ 0.57
CACNA1A-231ENST00000636816 RBM27Q9P2N5 1060 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms