RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 OPTNQ96CV9 577 aa18.53■□□□□ 0.56
CACNA1A-230ENST00000636768 C1orf115Q9H7X2 142 aa18.53■□□□□ 0.56
CACNA1A-230ENST00000636768 PDS5AQ29RF7 1337 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-230ENST00000636768 GPR25O00155 361 aa18.52■□□□□ 0.56
CACNA1A-230ENST00000636768 RLBP1P12271 317 aa18.52■□□□□ 0.56
CACNA1A-230ENST00000636768 DCAF15Q66K64 600 aa18.52■□□□□ 0.56
CACNA1A-230ENST00000636768 SPTY2D1Q68D10 685 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-230ENST00000636768 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-230ENST00000636768 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.52■□□□□ 0.56
CACNA1A-230ENST00000636768 USP40Q9NVE5 1235 aa18.52■□□□□ 0.56
CACNA1A-230ENST00000636768 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-230ENST00000636768 RPAP1Q9BWH6 1393 aaPredicted RBP18.52■□□□□ 0.55
CACNA1A-230ENST00000636768 IGF2BP3O00425 579 aaKnown RBP eCLIP18.51■□□□□ 0.55
CACNA1A-230ENST00000636768 TCP10Q12799 353 aa18.51■□□□□ 0.55
CACNA1A-230ENST00000636768 POLA2Q14181 598 aa18.51■□□□□ 0.55
CACNA1A-230ENST00000636768 OTUD7BQ6GQQ9 843 aa18.51■□□□□ 0.55
CACNA1A-230ENST00000636768 SLF2Q8IX21 1173 aa18.51■□□□□ 0.55
CACNA1A-230ENST00000636768 FAM151AQ8WW52 585 aa18.51■□□□□ 0.55
CACNA1A-230ENST00000636768 WRNIP1Q96S55 665 aa18.51■□□□□ 0.55
CACNA1A-230ENST00000636768 CFHR5Q9BXR6 569 aa18.51■□□□□ 0.55
CACNA1A-230ENST00000636768 ATP8B2P98198 1209 aa18.5■□□□□ 0.55
CACNA1A-230ENST00000636768 NOM1Q5C9Z4 860 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-230ENST00000636768 SSH3Q8TE77 659 aa18.5■□□□□ 0.55
CACNA1A-230ENST00000636768 OTUD5Q96G74 571 aa18.5■□□□□ 0.55
CACNA1A-230ENST00000636768 MYH13Q9UKX3 1938 aa18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 ZBTB7BO15156 539 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 FKTNO75072 461 aa18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 SURF6O75683 361 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 NFIAQ12857 509 aa18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 ERICH6Q7L0X2 663 aa18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 SPATA5Q8NB90 893 aa18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 ZNF341Q9BYN7 854 aa18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 R3HDMLQ9H3Y0 253 aa18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 GAKO14976 1311 aa18.49■□□□□ 0.55
CACNA1A-230ENST00000636768 GTF2A2P52657 109 aa18.48■□□□□ 0.55
CACNA1A-230ENST00000636768 MIGA2Q7L4E1 593 aa18.48■□□□□ 0.55
CACNA1A-230ENST00000636768 HMG20BQ9P0W2 317 aa18.48■□□□□ 0.55
CACNA1A-230ENST00000636768 SNCAIPQ9Y6H5 919 aa18.48■□□□□ 0.55
CACNA1A-230ENST00000636768 SPDYE5A6NIY4 337 aa18.47■□□□□ 0.55
CACNA1A-230ENST00000636768 UQCRFS1P1P0C7P4 283 aa18.47■□□□□ 0.55
CACNA1A-230ENST00000636768 ARID4AP29374 1257 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-230ENST00000636768 TNNI3KQ59H18 835 aa18.47■□□□□ 0.55
CACNA1A-230ENST00000636768 PI16Q6UXB8 463 aa18.47■□□□□ 0.55
CACNA1A-230ENST00000636768 PANK1Q8TE04 598 aa18.47■□□□□ 0.55
CACNA1A-230ENST00000636768 ZKSCAN4Q969J2 545 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-230ENST00000636768 FAM198AQ9UFP1 575 aa18.47■□□□□ 0.55
CACNA1A-230ENST00000636768 FPGT-TNNI3KV9GXZ4 949 aa18.47■□□□□ 0.55
CACNA1A-230ENST00000636768 CCL15-CCL14A0A0B4J2E2 113 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 TESPA1A2RU30 521 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 MS4A1P11836 297 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 BTDP43251 543 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 MECOMQ03112 1051 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 PKN2Q16513 984 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 CCL15Q16663 113 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 ERO1BQ86YB8 467 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 MS4A4AQ96JQ5 239 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 PTPN18Q99952 460 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 GPR108Q9NPR9 543 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 OTOFQ9HC10 1997 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 MROH7-TTC4A0A0A0MT08 1334 aa18.46■□□□□ 0.55
CACNA1A-230ENST00000636768 RGS3P49796 1198 aa18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 GSTO1P78417 241 aa18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 CRHR2Q13324 411 aa18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 CCDC158Q5M9N0 1113 aa18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 TTC39AQ5SRH9 613 aa18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 TBC1D9Q6ZT07 1266 aa18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 ZSCAN29Q8IWY8 852 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 BRI3BPQ8WY22 251 aa18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 FAM163AQ96GL9 167 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 IDI2Q9BXS1 227 aa18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 RAI14Q9P0K7 980 aa18.45■□□□□ 0.54
CACNA1A-230ENST00000636768 ENTPD3O75355 529 aa18.44■□□□□ 0.54
CACNA1A-230ENST00000636768 INPP5BP32019 993 aa18.44■□□□□ 0.54
CACNA1A-230ENST00000636768 MCAMP43121 646 aa18.44■□□□□ 0.54
CACNA1A-230ENST00000636768 CEP85Q6P2H3 762 aa18.44■□□□□ 0.54
CACNA1A-230ENST00000636768 DBNDD2Q9BQY9 259 aa18.44■□□□□ 0.54
CACNA1A-230ENST00000636768 LRP2BPQ9P2M1 347 aa18.44■□□□□ 0.54
CACNA1A-230ENST00000636768 NOP58Q9Y2X3 529 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-230ENST00000636768 LDHCP07864 332 aa18.43■□□□□ 0.54
CACNA1A-230ENST00000636768 CETPP11597 493 aa18.43■□□□□ 0.54
CACNA1A-230ENST00000636768 PPIL2Q13356 520 aa18.43■□□□□ 0.54
CACNA1A-230ENST00000636768 SNAPC2Q13487 334 aa18.43■□□□□ 0.54
CACNA1A-230ENST00000636768 PICALMQ13492 652 aa18.43■□□□□ 0.54
CACNA1A-230ENST00000636768 ZFPM1Q8IX07 1006 aa18.43■□□□□ 0.54
CACNA1A-230ENST00000636768 GPR75-ASB3A0A0A6YYF3 556 aa18.42■□□□□ 0.54
CACNA1A-230ENST00000636768 IRF6O14896 467 aa18.42■□□□□ 0.54
CACNA1A-230ENST00000636768 TAF1CQ15572 869 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-230ENST00000636768 NSUN4Q96CB9 384 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-230ENST00000636768 SNRKQ9NRH2 765 aa18.42■□□□□ 0.54
CACNA1A-230ENST00000636768 HPS5Q9UPZ3 1129 aa18.42■□□□□ 0.54
CACNA1A-230ENST00000636768 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
CACNA1A-230ENST00000636768 WDHD1O75717 1129 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-230ENST00000636768 PPATQ06203 517 aa18.41■□□□□ 0.54
CACNA1A-230ENST00000636768 FBXO46Q6PJ61 603 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-230ENST00000636768 FAM43AQ8N2R8 423 aa18.41■□□□□ 0.54
CACNA1A-230ENST00000636768 ZNF384Q8TF68 577 aa18.41■□□□□ 0.54
CACNA1A-230ENST00000636768 ERO1AQ96HE7 468 aa18.41■□□□□ 0.54
CACNA1A-230ENST00000636768 ZFYVE28Q9HCC9 887 aa18.41■□□□□ 0.54
CACNA1A-230ENST00000636768 DDX4Q9NQI0 724 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms