RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 USP50Q70EL3 339 aaPredicted RBP18.74■□□□□ 0.59
CTSD-207ENST00000636571 FAM163AQ96GL9 167 aaPredicted RBP18.74■□□□□ 0.59
CTSD-207ENST00000636571 PUS7LQ9H0K6 701 aaKnown RBP18.74■□□□□ 0.59
CTSD-207ENST00000636571 GGA3Q9NZ52 723 aa18.74■□□□□ 0.59
CTSD-207ENST00000636571 GPR75-ASB3A0A0A6YYF3 556 aa18.73■□□□□ 0.59
CTSD-207ENST00000636571 RNF113AO15541 343 aaKnown RBP18.73■□□□□ 0.59
CTSD-207ENST00000636571 ANGEL2Q5VTE6 544 aaKnown RBP18.73■□□□□ 0.59
CTSD-207ENST00000636571 CDC42EP5Q6NZY7 148 aa18.73■□□□□ 0.59
CTSD-207ENST00000636571 OSBP2Q969R2 916 aa18.73■□□□□ 0.59
CTSD-207ENST00000636571 BMP2KLQ5H9B9 411 aa18.73■□□□□ 0.59
CTSD-207ENST00000636571 SH3RF3Q8TEJ3 882 aaPredicted RBP18.73■□□□□ 0.59
CTSD-207ENST00000636571 FAM227BQ96M60 508 aa18.73■□□□□ 0.59
CTSD-207ENST00000636571 CLEC11AQ9Y240 323 aa18.73■□□□□ 0.59
CTSD-207ENST00000636571 M0R2C6 588 aa18.72■□□□□ 0.59
CTSD-207ENST00000636571 LDHCP07864 332 aa18.72■□□□□ 0.59
CTSD-207ENST00000636571 RHBDL3P58872 404 aa18.72■□□□□ 0.59
CTSD-207ENST00000636571 UBE3CQ15386 1083 aa18.72■□□□□ 0.59
CTSD-207ENST00000636571 PNMA8AQ86V59 439 aaPredicted RBP18.72■□□□□ 0.59
CTSD-207ENST00000636571 SLF2Q8IX21 1173 aa18.72■□□□□ 0.59
CTSD-207ENST00000636571 RIOK1Q9BRS2 568 aaKnown RBP18.72■□□□□ 0.59
CTSD-207ENST00000636571 VEZTQ9HBM0 779 aa18.72■□□□□ 0.59
CTSD-207ENST00000636571 USP40Q9NVE5 1235 aa18.72■□□□□ 0.59
CTSD-207ENST00000636571 ZNF70Q9UC06 446 aaPredicted RBP18.72■□□□□ 0.59
CTSD-207ENST00000636571 A0A0D9SFI3 127 aa18.71■□□□□ 0.59
CTSD-207ENST00000636571 NFIAQ12857 509 aa18.71■□□□□ 0.59
CTSD-207ENST00000636571 SPDYE2Q495Y8 402 aa18.71■□□□□ 0.59
CTSD-207ENST00000636571 MAP1SQ66K74 1059 aaPredicted RBP18.71■□□□□ 0.59
CTSD-207ENST00000636571 CCDC129Q6ZRS4 1044 aa18.71■□□□□ 0.59
CTSD-207ENST00000636571 LCORLQ8N3X6 602 aa18.71■□□□□ 0.59
CTSD-207ENST00000636571 ARMT1Q9H993 441 aa18.71■□□□□ 0.59
CTSD-207ENST00000636571 MMP14P50281 582 aa18.7■□□□□ 0.58
CTSD-207ENST00000636571 NMIQ13287 307 aaPredicted RBP18.7■□□□□ 0.58
CTSD-207ENST00000636571 ZSCAN25Q6NSZ9 544 aa18.7■□□□□ 0.58
CTSD-207ENST00000636571 IL25Q9H293 177 aa18.7■□□□□ 0.58
CTSD-207ENST00000636571 TCP10L2B9ZVM9 353 aa18.7■□□□□ 0.58
CTSD-207ENST00000636571 MBD4O95243 580 aa18.7■□□□□ 0.58
CTSD-207ENST00000636571 FMR1Q06787 632 aaKnown RBP eCLIP18.7■□□□□ 0.58
CTSD-207ENST00000636571 ZMYM1Q5SVZ6 1142 aa18.7■□□□□ 0.58
CTSD-207ENST00000636571 APPBP2Q92624 585 aa18.7■□□□□ 0.58
CTSD-207ENST00000636571 DDX4Q9NQI0 724 aaKnown RBP18.7■□□□□ 0.58
CTSD-207ENST00000636571 MAGEB6P1A0A0J9YX57 407 aa18.69■□□□□ 0.58
CTSD-207ENST00000636571 ADM5C9JUS6 153 aa18.69■□□□□ 0.58
CTSD-207ENST00000636571 PRKAB2O43741 272 aa18.69■□□□□ 0.58
CTSD-207ENST00000636571 ZFYP08048 801 aaPredicted RBP18.69■□□□□ 0.58
CTSD-207ENST00000636571 PRAMEF18Q5VWM3 479 aa18.69■□□□□ 0.58
CTSD-207ENST00000636571 FOCADQ5VW36 1801 aa18.69■□□□□ 0.58
CTSD-207ENST00000636571 MYO1BO43795 1136 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 WDHD1O75717 1129 aaPredicted RBP18.68■□□□□ 0.58
CTSD-207ENST00000636571 PPP4CP60510 307 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 CWC27Q6UX04 472 aaKnown RBP18.68■□□□□ 0.58
CTSD-207ENST00000636571 LDHDQ86WU2 507 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 CDAN1Q8IWY9 1227 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 ZFPM1Q8IX07 1006 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 GLIS2Q9BZE0 524 aaPredicted RBP18.68■□□□□ 0.58
CTSD-207ENST00000636571 PGAP2Q9UHJ9 254 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 RFX7Q2KHR2 1363 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 BAG3O95817 575 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 TCP10Q12799 353 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 PICALMQ13492 652 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 C8orf34Q49A92 452 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 ZNF589Q86UQ0 364 aaPredicted RBP18.68■□□□□ 0.58
CTSD-207ENST00000636571 TEX11Q8IYF3 940 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 NOL10Q9BSC4 688 aaKnown RBP18.68■□□□□ 0.58
CTSD-207ENST00000636571 FAM198AQ9UFP1 575 aa18.68■□□□□ 0.58
CTSD-207ENST00000636571 CNTNAP1P78357 1384 aa18.67■□□□□ 0.58
CTSD-207ENST00000636571 BAZ2AQ9UIF9 1905 aaKnown RBP18.67■□□□□ 0.58
CTSD-207ENST00000636571 IGSF3O75054 1194 aa18.67■□□□□ 0.58
CTSD-207ENST00000636571 CHMLP26374 656 aa18.67■□□□□ 0.58
CTSD-207ENST00000636571 SDR42E1Q8WUS8 393 aa18.67■□□□□ 0.58
CTSD-207ENST00000636571 AIDAQ96BJ3 306 aa18.67■□□□□ 0.58
CTSD-207ENST00000636571 DIAPH3Q9NSV4 1193 aa18.67■□□□□ 0.58
CTSD-207ENST00000636571 TRAF5O00463 557 aa18.66■□□□□ 0.58
CTSD-207ENST00000636571 GPAA1O43292 621 aa18.66■□□□□ 0.58
CTSD-207ENST00000636571 USP48Q86UV5 1035 aa18.66■□□□□ 0.58
CTSD-207ENST00000636571 MAPKAPK5Q8IW41 473 aa18.66■□□□□ 0.58
CTSD-207ENST00000636571 ZC3H15Q8WU90 426 aaKnown RBP18.66■□□□□ 0.58
CTSD-207ENST00000636571 TGFBRAP1Q8WUH2 860 aa18.66■□□□□ 0.58
CTSD-207ENST00000636571 DCPSQ96C86 337 aaKnown RBP18.66■□□□□ 0.58
CTSD-207ENST00000636571 SLC4A8Q2Y0W8 1093 aa18.65■□□□□ 0.58
CTSD-207ENST00000636571 LRRFIP1Q32MZ4 808 aaKnown RBP18.65■□□□□ 0.58
CTSD-207ENST00000636571 KRT26Q7Z3Y9 468 aa18.65■□□□□ 0.58
CTSD-207ENST00000636571 STRBPQ96SI9 672 aaKnown RBP18.65■□□□□ 0.58
CTSD-207ENST00000636571 TMEM39BQ9GZU3 492 aa18.65■□□□□ 0.58
CTSD-207ENST00000636571 VPS53Q5VIR6 699 aa18.65■□□□□ 0.58
CTSD-207ENST00000636571 NAV1Q8NEY1 1877 aa18.64■□□□□ 0.58
CTSD-207ENST00000636571 MYH1P12882 1939 aa18.64■□□□□ 0.57
CTSD-207ENST00000636571 FOXP2O15409 715 aa18.64■□□□□ 0.57
CTSD-207ENST00000636571 SLURP2P0DP57 97 aa18.64■□□□□ 0.57
CTSD-207ENST00000636571 EVX2Q03828 476 aa18.64■□□□□ 0.57
CTSD-207ENST00000636571 RASA3Q14644 834 aa18.64■□□□□ 0.57
CTSD-207ENST00000636571 CHADLQ6NUI6 762 aa18.64■□□□□ 0.57
CTSD-207ENST00000636571 TMED8Q6PL24 325 aaPredicted RBP18.64■□□□□ 0.57
CTSD-207ENST00000636571 IDI2Q9BXS1 227 aa18.64■□□□□ 0.57
CTSD-207ENST00000636571 DEFB129Q9H1M3 183 aa18.64■□□□□ 0.57
CTSD-207ENST00000636571 TMOD2Q9NZR1 351 aa18.64■□□□□ 0.57
CTSD-207ENST00000636571 FLT1P17948 1338 aa18.63■□□□□ 0.57
CTSD-207ENST00000636571 PITPNM2Q9BZ72 1349 aa18.63■□□□□ 0.57
CTSD-207ENST00000636571 CDC45O75419 566 aa18.63■□□□□ 0.57
CTSD-207ENST00000636571 MCMDC2Q4G0Z9 681 aa18.63■□□□□ 0.57
CTSD-207ENST00000636571 APOBEC3FQ8IUX4 373 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms