RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 WWC3Q9ULE0 1092 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 EIF1AYO14602 144 aaKnown RBP4.44□□□□□ -1.7
PSPC1-208ENST00000635562 PRPF40AO75400 957 aaKnown RBP4.44□□□□□ -1.7
PSPC1-208ENST00000635562 CYP11A1P05108 521 aa4.44□□□□□ -1.7
PSPC1-208ENST00000635562 ESRRAP11474 423 aaPredicted RBP4.44□□□□□ -1.7
PSPC1-208ENST00000635562 HOXA10P31260 410 aaPredicted RBP4.44□□□□□ -1.7
PSPC1-208ENST00000635562 HNRNPUQ00839 825 aaKnown RBP eCLIP4.44□□□□□ -1.7
PSPC1-208ENST00000635562 MRPL58Q14197 206 aaKnown RBP4.44□□□□□ -1.7
PSPC1-208ENST00000635562 NFKBIBQ15653 356 aa4.44□□□□□ -1.7
PSPC1-208ENST00000635562 DUSP27Q5VZP5 1158 aa4.44□□□□□ -1.7
PSPC1-208ENST00000635562 TP53INP2Q8IXH6 220 aa4.44□□□□□ -1.7
PSPC1-208ENST00000635562 C2CD4AQ8NCU7 369 aaPredicted RBP4.44□□□□□ -1.7
PSPC1-208ENST00000635562 ASAP3Q8TDY4 903 aa4.44□□□□□ -1.7
PSPC1-208ENST00000635562 UBE2Q2Q8WVN8 375 aa4.44□□□□□ -1.7
PSPC1-208ENST00000635562 TBC1D32Q96NH3 1257 aa4.44□□□□□ -1.7
PSPC1-208ENST00000635562 SETDB2Q96T68 719 aa4.44□□□□□ -1.7
PSPC1-208ENST00000635562 ZFYVE28Q9HCC9 887 aa4.44□□□□□ -1.7
PSPC1-208ENST00000635562 FOXD3Q9UJU5 478 aaPredicted RBP4.44□□□□□ -1.7
PSPC1-208ENST00000635562 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.43□□□□□ -1.7
PSPC1-208ENST00000635562 PNMA6FA0A0J9YX94 578 aa4.43□□□□□ -1.7
PSPC1-208ENST00000635562 LDHBP07195 334 aaKnown RBP4.43□□□□□ -1.7
PSPC1-208ENST00000635562 NEFLP07196 543 aa4.43□□□□□ -1.7
PSPC1-208ENST00000635562 ACPPP15309 386 aa4.43□□□□□ -1.7
PSPC1-208ENST00000635562 MAPK8P45983 427 aa4.43□□□□□ -1.7
PSPC1-208ENST00000635562 SOX4Q06945 474 aaPredicted RBP4.43□□□□□ -1.7
PSPC1-208ENST00000635562 ZNF326Q5BKZ1 582 aaKnown RBP4.43□□□□□ -1.7
PSPC1-208ENST00000635562 STK11IPQ8N1F8 1099 aa4.43□□□□□ -1.7
PSPC1-208ENST00000635562 POU5F2Q8N7G0 328 aa4.43□□□□□ -1.7
PSPC1-208ENST00000635562 FBF1Q8TES7 1133 aa4.43□□□□□ -1.7
PSPC1-208ENST00000635562 MRRFQ96E11 262 aaKnown RBP4.43□□□□□ -1.7
PSPC1-208ENST00000635562 HHIPQ96QV1 700 aa4.43□□□□□ -1.7
PSPC1-208ENST00000635562 RNF19AQ9NV58 838 aa4.43□□□□□ -1.7
PSPC1-208ENST00000635562 PRKAG2Q9UGJ0 569 aa4.43□□□□□ -1.7
PSPC1-208ENST00000635562 E9PSI1 815 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 EREGO14944 169 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 CPNE3O75131 537 aaKnown RBP4.42□□□□□ -1.7
PSPC1-208ENST00000635562 ADH5P11766 374 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 ITGB5P18084 799 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 DAB2P98082 770 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 FGD1P98174 961 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 GSTM4Q03013 218 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 LDLRAD1Q5T700 205 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 USPL1Q5W0Q7 1092 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 ALG1LQ6GMV1 187 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 TMC4Q7Z404 712 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 FBLIM1Q8WUP2 373 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 DUSP9Q99956 384 aaKnown RBP4.42□□□□□ -1.7
PSPC1-208ENST00000635562 CLEC4MQ9H2X3 399 aaPredicted RBP4.42□□□□□ -1.7
PSPC1-208ENST00000635562 SYNGAP1Q96PV0 1343 aa4.42□□□□□ -1.7
PSPC1-208ENST00000635562 BIN1O00499 593 aa4.41□□□□□ -1.7
PSPC1-208ENST00000635562 TRPA1O75762 1119 aa4.41□□□□□ -1.7
PSPC1-208ENST00000635562 RECKO95980 971 aa4.41□□□□□ -1.7
PSPC1-208ENST00000635562 CDPF1Q6NVV7 123 aa4.41□□□□□ -1.7
PSPC1-208ENST00000635562 GALNT12Q8IXK2 581 aa4.41□□□□□ -1.7
PSPC1-208ENST00000635562 FLCNQ8NFG4 579 aa4.41□□□□□ -1.7
PSPC1-208ENST00000635562 MISP3Q96FF7 219 aa4.41□□□□□ -1.7
PSPC1-208ENST00000635562 PARP2Q9UGN5 583 aa4.41□□□□□ -1.7
PSPC1-208ENST00000635562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.41□□□□□ -1.7
PSPC1-208ENST00000635562 DRD2P14416 443 aa4.4□□□□□ -1.71
PSPC1-208ENST00000635562 ATP2B2Q01814 1243 aa4.4□□□□□ -1.71
PSPC1-208ENST00000635562 PCDH1Q08174 1060 aa4.4□□□□□ -1.71
PSPC1-208ENST00000635562 POU4F3Q15319 338 aa4.4□□□□□ -1.71
PSPC1-208ENST00000635562 HGSNATQ68CP4 663 aa4.4□□□□□ -1.71
PSPC1-208ENST00000635562 OGFOD2Q6N063 350 aa4.4□□□□□ -1.71
PSPC1-208ENST00000635562 CCDC74AQ96AQ1 378 aa4.4□□□□□ -1.71
PSPC1-208ENST00000635562 FRMD6Q96NE9 622 aa4.4□□□□□ -1.71
PSPC1-208ENST00000635562 CORO1BQ9BR76 489 aa4.4□□□□□ -1.71
PSPC1-208ENST00000635562 NRSN2Q9GZP1 204 aa4.4□□□□□ -1.71
PSPC1-208ENST00000635562 ARID1BQ8NFD5 2236 aaPredicted RBP4.4□□□□□ -1.71
PSPC1-208ENST00000635562 A0A096LPE4 126 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 A0A1W2PPZ6 126 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 DLGAP3O95886 979 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 GNA15P30679 374 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 JAG1P78504 1218 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 CYP27C1Q4G0S4 372 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 PEAR1Q5VY43 1037 aaPredicted RBP4.39□□□□□ -1.71
PSPC1-208ENST00000635562 CCNJLQ8IV13 435 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 GATA6Q92908 595 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 RAD18Q9NS91 495 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 SLC5A6Q9Y289 635 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 ACTL7BQ9Y614 415 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 AK5Q9Y6K8 562 aa4.39□□□□□ -1.71
PSPC1-208ENST00000635562 MAOBP27338 520 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 ADMP35318 185 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 AP3B2Q13367 1082 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.38□□□□□ -1.71
PSPC1-208ENST00000635562 KIAA0319Q5VV43 1072 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 PI16Q6UXB8 463 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 NFXL1Q6ZNB6 911 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 GLIS3Q8NEA6 775 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 EPS8L3Q8TE67 593 aaKnown RBP4.38□□□□□ -1.71
PSPC1-208ENST00000635562 FAM161BQ96MY7 647 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 OSBPL7Q9BZF2 842 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 SEMA6CQ9H3T2 930 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 GSX1Q9H4S2 264 aaPredicted RBP4.38□□□□□ -1.71
PSPC1-208ENST00000635562 ACSS3Q9H6R3 686 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 LIN7BQ9HAP6 207 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 NPHS2Q9NP85 383 aa4.38□□□□□ -1.71
PSPC1-208ENST00000635562 PAK6Q9NQU5 681 aaPredicted RBP4.38□□□□□ -1.71
PSPC1-208ENST00000635562 A0A1W2PP55 124 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms