RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 GOLGA5Q8TBA6 731 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 SREK1Q8WXA9 508 aaKnown RBP13.11□□□□□ -0.31
COL11A1-211ENST00000635193 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 CAPN7Q9Y6W3 813 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 ZMYM3Q14202 1370 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 GNAT2P19087 354 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 GAS2L3Q86XJ1 694 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 GPR161Q8N6U8 529 aaKnown RBP13.11□□□□□ -0.31
COL11A1-211ENST00000635193 TSNARE1Q96NA8 513 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL11A1-211ENST00000635193 ATP2A1O14983 1001 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
COL11A1-211ENST00000635193 MICAL1Q8TDZ2 1067 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 CABP5Q9NP86 173 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 CCDC152Q4G0S7 254 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 CCDC38Q502W7 563 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 RILPL1Q5EBL4 403 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 VPS16Q9H269 839 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 DTHD1Q6ZMT9 781 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 NKIRAS1Q9NYS0 192 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 CIB2O75838 187 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 BAIAP2L1Q9UHR4 511 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 FLT4P35916 1363 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 RIMS2Q9UQ26 1411 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 VWA3AA6NCI4 1184 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 ZNF202O95125 648 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 BRD3Q15059 726 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 KRT79Q5XKE5 535 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 IQSEC3Q9UPP2 1182 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-211ENST00000635193 SAMM50Q9Y512 469 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 KIF21AQ7Z4S6 1674 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 NEDD9Q14511 834 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 CEP85LQ5SZL2 805 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 NCOA5Q9HCD5 579 aaKnown RBP13.1□□□□□ -0.31
COL11A1-211ENST00000635193 ANAPC4Q9UJX5 808 aa13.1□□□□□ -0.31
COL11A1-211ENST00000635193 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-211ENST00000635193 KRT28Q7Z3Y7 464 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 APBB1IPQ7Z5R6 666 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-211ENST00000635193 TMEM110-MUSTN1A8MSY1 372 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 GSTO1P78417 241 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 ERCC6LQ2NKX8 1250 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 CCDC25Q86WR0 208 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 RPGRQ92834 1020 aaKnown RBP13.09□□□□□ -0.31
COL11A1-211ENST00000635193 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-211ENST00000635193 NPATQ14207 1427 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 CERS3Q8IU89 383 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 MLKLQ8NB16 471 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 RGS22Q8NE09 1264 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 GPT2Q8TD30 523 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 SYNRGQ9UMZ2 1314 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 MAGEB6P1A0A0J9YX57 407 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 PLIN2Q99541 437 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 MRVI1Q9Y6F6 885 aa13.09□□□□□ -0.31
COL11A1-211ENST00000635193 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.31
COL11A1-211ENST00000635193 CUTAO60888 179 aa13.08□□□□□ -0.31
COL11A1-211ENST00000635193 TBC1D8BQ0IIM8 1120 aa13.08□□□□□ -0.31
COL11A1-211ENST00000635193 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.31
COL11A1-211ENST00000635193 NOC4LQ9BVI4 516 aaKnown RBP13.08□□□□□ -0.31
COL11A1-211ENST00000635193 DTNBO60941 627 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 ATP5DP30049 168 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 ZNF174Q15697 407 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 WHAMMP3Q1A5X7 153 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 RUFY4Q6ZNE9 571 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 IFT20Q8IY31 132 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 RNF168Q8IYW5 571 aaPredicted RBP13.08□□□□□ -0.32
COL11A1-211ENST00000635193 FAM114A2Q9NRY5 505 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 ABCC1P33527 1531 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 DCAF8L1A6NGE4 600 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 HLA-DOAP06340 250 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 GSTA5Q7RTV2 222 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL11A1-211ENST00000635193 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 CCDC110Q8TBZ0 833 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 KIAA1524Q8TCG1 905 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 VCX3BQ9H321 246 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 FAM184BQ9ULE4 1060 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 PZPP20742 1482 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 LIG3P49916 1009 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 CALCOCO2Q13137 446 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 TMTC1Q8IUR5 882 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 MAGEB6Q8N7X4 407 aa13.08□□□□□ -0.32
COL11A1-211ENST00000635193 POLR2DO15514 142 aaKnown RBP13.07□□□□□ -0.32
COL11A1-211ENST00000635193 GSPT1P15170 499 aaKnown RBP13.07□□□□□ -0.32
COL11A1-211ENST00000635193 USP37Q86T82 979 aa13.07□□□□□ -0.32
COL11A1-211ENST00000635193 TEX14Q8IWB6 1497 aa13.07□□□□□ -0.32
COL11A1-211ENST00000635193 MTX1Q13505 466 aa13.07□□□□□ -0.32
COL11A1-211ENST00000635193 XPO4Q9C0E2 1151 aaKnown RBP13.07□□□□□ -0.32
COL11A1-211ENST00000635193 NFE2L3Q9Y4A8 694 aa13.07□□□□□ -0.32
COL11A1-211ENST00000635193 E7EVH7 732 aa13.07□□□□□ -0.32
COL11A1-211ENST00000635193 PKP1Q13835 747 aa13.07□□□□□ -0.32
COL11A1-211ENST00000635193 OTUD7BQ6GQQ9 843 aa13.07□□□□□ -0.32
COL11A1-211ENST00000635193 LRRC45Q96CN5 670 aa13.07□□□□□ -0.32
COL11A1-211ENST00000635193 NUP153P49790 1475 aaKnown RBP13.07□□□□□ -0.32
COL11A1-211ENST00000635193 PNMA6EA0A0J9YXQ4 647 aa13.07□□□□□ -0.32
COL11A1-211ENST00000635193 BICD1Q96G01 975 aa13.07□□□□□ -0.32
COL11A1-211ENST00000635193 DDX23Q9BUQ8 820 aaKnown RBP13.07□□□□□ -0.32
COL11A1-211ENST00000635193 C6orf229H3BNL8 230 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms