RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MRIQ9BWK5 157 aa17.35■□□□□ 0.37
LINC00339-208ENST00000634934 TAF1DQ9H5J8 278 aaPredicted RBP17.35■□□□□ 0.37
LINC00339-208ENST00000634934 AATFQ9NY61 560 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC00339-208ENST00000634934 GPRC5DQ9NZD1 345 aa17.35■□□□□ 0.37
LINC00339-208ENST00000634934 IQCA1LA6NCM1 817 aa17.34■□□□□ 0.37
LINC00339-208ENST00000634934 MBD4O95243 580 aa17.34■□□□□ 0.37
LINC00339-208ENST00000634934 BAG3O95817 575 aa17.34■□□□□ 0.37
LINC00339-208ENST00000634934 EPHX2P34913 555 aa17.34■□□□□ 0.37
LINC00339-208ENST00000634934 ZNF280AP59817 542 aaPredicted RBP17.34■□□□□ 0.37
LINC00339-208ENST00000634934 DYNLL1P63167 89 aaKnown RBP17.34■□□□□ 0.37
LINC00339-208ENST00000634934 DLGAP5Q15398 846 aa17.34■□□□□ 0.37
LINC00339-208ENST00000634934 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
LINC00339-208ENST00000634934 PCDHAC2Q9Y5I4 1007 aa17.34■□□□□ 0.37
LINC00339-208ENST00000634934 MAST2Q6P0Q8 1798 aa17.34■□□□□ 0.37
LINC00339-208ENST00000634934 GAKO14976 1311 aa17.34■□□□□ 0.37
LINC00339-208ENST00000634934 GPR75-ASB3A0A0A6YYF3 556 aa17.33■□□□□ 0.37
LINC00339-208ENST00000634934 MMP14P50281 582 aa17.33■□□□□ 0.37
LINC00339-208ENST00000634934 ZDHHC15Q96MV8 337 aa17.33■□□□□ 0.37
LINC00339-208ENST00000634934 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.37
LINC00339-208ENST00000634934 ARMT1Q9H993 441 aa17.33■□□□□ 0.37
LINC00339-208ENST00000634934 MYOZ2Q9NPC6 264 aa17.33■□□□□ 0.37
LINC00339-208ENST00000634934 MYH7P12883 1935 aa17.33■□□□□ 0.36
LINC00339-208ENST00000634934 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.36
LINC00339-208ENST00000634934 GPAA1O43292 621 aa17.32■□□□□ 0.36
LINC00339-208ENST00000634934 TBC1D10BQ4KMP7 808 aaPredicted RBP17.32■□□□□ 0.36
LINC00339-208ENST00000634934 EAPPQ56P03 285 aaPredicted RBP17.32■□□□□ 0.36
LINC00339-208ENST00000634934 SAMD7Q7Z3H4 446 aa17.32■□□□□ 0.36
LINC00339-208ENST00000634934 LCORLQ8N3X6 602 aa17.32■□□□□ 0.36
LINC00339-208ENST00000634934 IL25Q9H293 177 aa17.32■□□□□ 0.36
LINC00339-208ENST00000634934 SGSM2O43147 1006 aa17.31■□□□□ 0.36
LINC00339-208ENST00000634934 EGFRP00533 1210 aa17.31■□□□□ 0.36
LINC00339-208ENST00000634934 APOBEC3HQ6NTF7 200 aaKnown RBP17.31■□□□□ 0.36
LINC00339-208ENST00000634934 ZNF589Q86UQ0 364 aaPredicted RBP17.31■□□□□ 0.36
LINC00339-208ENST00000634934 RIOK1Q9BRS2 568 aaKnown RBP17.31■□□□□ 0.36
LINC00339-208ENST00000634934 RAD50Q92878 1312 aa17.31■□□□□ 0.36
LINC00339-208ENST00000634934 MYH2Q9UKX2 1941 aa17.31■□□□□ 0.36
LINC00339-208ENST00000634934 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
LINC00339-208ENST00000634934 TOMM70O94826 608 aa17.31■□□□□ 0.36
LINC00339-208ENST00000634934 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
LINC00339-208ENST00000634934 MFAP1P55081 439 aaKnown RBP17.31■□□□□ 0.36
LINC00339-208ENST00000634934 PPP4CP60510 307 aa17.31■□□□□ 0.36
LINC00339-208ENST00000634934 SH3RF3Q8TEJ3 882 aaPredicted RBP17.31■□□□□ 0.36
LINC00339-208ENST00000634934 PRMT6Q96LA8 375 aaPredicted RBP17.31■□□□□ 0.36
LINC00339-208ENST00000634934 STRBPQ96SI9 672 aaKnown RBP17.31■□□□□ 0.36
LINC00339-208ENST00000634934 USP40Q9NVE5 1235 aa17.31■□□□□ 0.36
LINC00339-208ENST00000634934 CCDC171Q6TFL3 1326 aa17.31■□□□□ 0.36
LINC00339-208ENST00000634934 PLCG2P16885 1265 aa17.3■□□□□ 0.36
LINC00339-208ENST00000634934 KIF4BQ2VIQ3 1234 aa17.3■□□□□ 0.36
LINC00339-208ENST00000634934 TEX11Q8IYF3 940 aa17.3■□□□□ 0.36
LINC00339-208ENST00000634934 MTMR14Q8NCE2 650 aa17.3■□□□□ 0.36
LINC00339-208ENST00000634934 TRPM4Q8TD43 1214 aa17.3■□□□□ 0.36
LINC00339-208ENST00000634934 CDC42EP5Q6NZY7 148 aa17.29■□□□□ 0.36
LINC00339-208ENST00000634934 KIAA1211Q6ZU35 1233 aa17.29■□□□□ 0.36
LINC00339-208ENST00000634934 CERS3Q8IU89 383 aa17.29■□□□□ 0.36
LINC00339-208ENST00000634934 CRNKL1Q9BZJ0 848 aaKnown RBP17.29■□□□□ 0.36
LINC00339-208ENST00000634934 TDRD3Q9H7E2 651 aaKnown RBP17.29■□□□□ 0.36
LINC00339-208ENST00000634934 ADARB2Q9NS39 739 aaKnown RBP17.29■□□□□ 0.36
LINC00339-208ENST00000634934 SLC4A4Q9Y6R1 1079 aa17.29■□□□□ 0.36
LINC00339-208ENST00000634934 WNT10BO00744 389 aa17.28■□□□□ 0.36
LINC00339-208ENST00000634934 PRKAB2O43741 272 aa17.28■□□□□ 0.36
LINC00339-208ENST00000634934 MYO1BO43795 1136 aa17.28■□□□□ 0.36
LINC00339-208ENST00000634934 APPP05067 770 aa17.28■□□□□ 0.36
LINC00339-208ENST00000634934 HIRAP54198 1017 aaPredicted RBP17.28■□□□□ 0.36
LINC00339-208ENST00000634934 RHBDL3P58872 404 aa17.28■□□□□ 0.36
LINC00339-208ENST00000634934 NBPF9Q3BBW0 867 aa17.28■□□□□ 0.36
LINC00339-208ENST00000634934 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
LINC00339-208ENST00000634934 CLRN2A0PK11 232 aa17.27■□□□□ 0.36
LINC00339-208ENST00000634934 GNAT2P19087 354 aa17.27■□□□□ 0.36
LINC00339-208ENST00000634934 CACNB3P54284 484 aa17.27■□□□□ 0.36
LINC00339-208ENST00000634934 C1QTNF8P60827 252 aa17.27■□□□□ 0.36
LINC00339-208ENST00000634934 VPS53Q5VIR6 699 aa17.27■□□□□ 0.36
LINC00339-208ENST00000634934 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.36
LINC00339-208ENST00000634934 RBM46Q8TBY0 533 aaKnown RBP17.27■□□□□ 0.36
LINC00339-208ENST00000634934 ZBED3Q96IU2 234 aaPredicted RBP17.27■□□□□ 0.36
LINC00339-208ENST00000634934 TMOD2Q9NZR1 351 aa17.27■□□□□ 0.36
LINC00339-208ENST00000634934 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
LINC00339-208ENST00000634934 REC8O95072 547 aa17.26■□□□□ 0.35
LINC00339-208ENST00000634934 USP5P45974 858 aa17.26■□□□□ 0.35
LINC00339-208ENST00000634934 TGFBRAP1Q8WUH2 860 aa17.26■□□□□ 0.35
LINC00339-208ENST00000634934 SDR42E1Q8WUS8 393 aa17.26■□□□□ 0.35
LINC00339-208ENST00000634934 VEZTQ9HBM0 779 aa17.26■□□□□ 0.35
LINC00339-208ENST00000634934 ZNF70Q9UC06 446 aaPredicted RBP17.26■□□□□ 0.35
LINC00339-208ENST00000634934 HSPD1P10809 573 aaKnown RBP17.26■□□□□ 0.35
LINC00339-208ENST00000634934 PICALMQ13492 652 aa17.26■□□□□ 0.35
LINC00339-208ENST00000634934 USP50Q70EL3 339 aaPredicted RBP17.26■□□□□ 0.35
LINC00339-208ENST00000634934 LDHDQ86WU2 507 aa17.26■□□□□ 0.35
LINC00339-208ENST00000634934 MAPKAPK5Q8IW41 473 aa17.26■□□□□ 0.35
LINC00339-208ENST00000634934 ASTN2O75129 1339 aaPredicted RBP17.25■□□□□ 0.35
LINC00339-208ENST00000634934 PATL2C9JE40 543 aaKnown RBP17.25■□□□□ 0.35
LINC00339-208ENST00000634934 EIF5BO60841 1220 aaKnown RBP17.25■□□□□ 0.35
LINC00339-208ENST00000634934 WDHD1O75717 1129 aaPredicted RBP17.25■□□□□ 0.35
LINC00339-208ENST00000634934 SEC24BO95487 1268 aa17.25■□□□□ 0.35
LINC00339-208ENST00000634934 PTH1RQ03431 593 aa17.25■□□□□ 0.35
LINC00339-208ENST00000634934 NBR1Q14596 966 aa17.25■□□□□ 0.35
LINC00339-208ENST00000634934 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
LINC00339-208ENST00000634934 MAP1SQ66K74 1059 aaPredicted RBP17.25■□□□□ 0.35
LINC00339-208ENST00000634934 SMC1BQ8NDV3 1235 aa17.25■□□□□ 0.35
LINC00339-208ENST00000634934 NACAP1Q9BZK3 213 aa17.25■□□□□ 0.35
LINC00339-208ENST00000634934 GSG1L2A8MUP6 293 aa17.24■□□□□ 0.35
LINC00339-208ENST00000634934 TCP10L2B9ZVM9 353 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms