RNA–Protein interactions for RNA: ENST00000630858.2

DDX3X-221, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-221ENST00000630858 MICALL1Q8N3F8 863 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 FAM204AQ9H8W3 233 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 INTS13Q9NVM9 706 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 POLR3EQ9NVU0 708 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
DDX3X-221ENST00000630858 DBNLQ9UJU6 430 aaKnown RBP11.28□□□□□ -0.6
DDX3X-221ENST00000630858 SOWAHDA6NJG2 315 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 KIF5CO60282 957 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 CCDC175P0C221 793 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 CMA1P23946 247 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 CASP8Q14790 479 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 ZNF569Q5MCW4 686 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 LRRC31Q6UY01 552 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 NCAPGQ9BPX3 1015 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 MKRN1Q9UHC7 482 aaKnown RBP11.28□□□□□ -0.6
DDX3X-221ENST00000630858 USP31Q70CQ4 1352 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 SPECC1LQ69YQ0 1117 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 CEP112Q8N8E3 955 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 TC2NQ8N9U0 490 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 KAZALD1Q96I82 304 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 JCADQ9P266 1359 aa11.28□□□□□ -0.6
DDX3X-221ENST00000630858 E7EWF7 191 aa11.27□□□□□ -0.6
DDX3X-221ENST00000630858 POTEB2H3BUK9 544 aa11.27□□□□□ -0.6
DDX3X-221ENST00000630858 ATP2B1P20020 1258 aa11.27□□□□□ -0.6
DDX3X-221ENST00000630858 CORO7P57737 925 aa11.27□□□□□ -0.6
DDX3X-221ENST00000630858 VSNL1P62760 191 aa11.27□□□□□ -0.6
DDX3X-221ENST00000630858 TRMT44Q8IYL2 757 aaKnown RBP11.27□□□□□ -0.6
DDX3X-221ENST00000630858 ORAI2Q96SN7 254 aa11.27□□□□□ -0.6
DDX3X-221ENST00000630858 A0A0U1RQJ8 604 aa11.27□□□□□ -0.61
DDX3X-221ENST00000630858 TFCP2Q12800 502 aa11.27□□□□□ -0.61
DDX3X-221ENST00000630858 ATRIPQ8WXE1 791 aa11.27□□□□□ -0.61
DDX3X-221ENST00000630858 DBNDD2Q9BQY9 259 aa11.27□□□□□ -0.61
DDX3X-221ENST00000630858 ACBD3Q9H3P7 528 aa11.27□□□□□ -0.61
DDX3X-221ENST00000630858 L1RE1Q9UN81 338 aa11.27□□□□□ -0.61
DDX3X-221ENST00000630858 SALL1Q9NSC2 1324 aa11.27□□□□□ -0.61
DDX3X-221ENST00000630858 KIF28PB7ZC32 967 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 CACNA1FO60840 1977 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 ATP5JP18859 108 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 AXDND1Q5T1B0 1012 aaPredicted RBP11.26□□□□□ -0.61
DDX3X-221ENST00000630858 SECISBP2LQ93073 1101 aaKnown RBP11.26□□□□□ -0.61
DDX3X-221ENST00000630858 CDC23Q9UJX2 597 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 GOLGA8BA8MQT2 603 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 GOLIM4O00461 696 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 PDE4BQ07343 736 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 ZNF530Q6P9A1 599 aaPredicted RBP11.26□□□□□ -0.61
DDX3X-221ENST00000630858 LINS1Q8NG48 757 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 FAM71BQ8TC56 605 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 HNRNPLLQ8WVV9 542 aaKnown RBP11.26□□□□□ -0.61
DDX3X-221ENST00000630858 CLIC6Q96NY7 704 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 NFE2L3Q9Y4A8 694 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 HAND2P61296 217 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 EXOSC10Q01780 885 aaKnown RBP11.26□□□□□ -0.61
DDX3X-221ENST00000630858 BRAPQ7Z569 592 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 STK11IPQ8N1F8 1099 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 ZNF274Q96GC6 653 aaPredicted RBP11.26□□□□□ -0.61
DDX3X-221ENST00000630858 C19orf44Q9H6X5 657 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 TUBE1Q9UJT0 475 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 PCDHA5Q9Y5H7 936 aa11.26□□□□□ -0.61
DDX3X-221ENST00000630858 KLF18A0A0U1RQI7 1052 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 MYL6BP14649 208 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 CDC27P30260 824 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 AKAP17AQ02040 695 aaKnown RBP11.25□□□□□ -0.61
DDX3X-221ENST00000630858 SLC39A6Q13433 755 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 ZNF827Q17R98 1081 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 TNNI3KQ59H18 835 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 SPECC1Q5M775 1068 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 NEUROD6Q96NK8 337 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 FPGT-TNNI3KV9GXZ4 949 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 CTAGE15A4D2H0 777 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 CTAGE9A4FU28 777 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 RNF40O75150 1001 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 HOXB7P09629 217 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 CTAGE8P0CG41 777 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 DNAJC21Q5F1R6 531 aaKnown RBP11.25□□□□□ -0.61
DDX3X-221ENST00000630858 CTAGE6Q86UF2 777 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 CTAGE4Q8IX94 777 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 GBP3Q9H0R5 595 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 USP54Q70EL1 1684 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 TMEM94Q12767 1356 aa11.25□□□□□ -0.61
DDX3X-221ENST00000630858 FOXN1O15353 648 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 RPS6KA5O75582 802 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 LONRF3Q496Y0 759 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 CCDC102BQ68D86 513 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 AFAP1L1Q8TED9 768 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 RABEP2Q9H5N1 569 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 ABCC6O95255 1503 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 N4BP2Q86UW6 1770 aaPredicted RBP11.24□□□□□ -0.61
DDX3X-221ENST00000630858 LRRIQ3A6PVS8 624 aaPredicted RBP11.24□□□□□ -0.61
DDX3X-221ENST00000630858 PPFIA4O75335 1185 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 DDX58O95786 925 aaKnown RBP11.24□□□□□ -0.61
DDX3X-221ENST00000630858 APPP05067 770 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 USP5P45974 858 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 LIG3P49916 1009 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 TBX2Q13207 712 aaPredicted RBP11.24□□□□□ -0.61
DDX3X-221ENST00000630858 SHC4Q6S5L8 630 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 TADA2BQ86TJ2 420 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 PPFIBP1Q86W92 1011 aa11.24□□□□□ -0.61
DDX3X-221ENST00000630858 EFCAB13Q8IY85 973 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms