RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 PI16Q6UXB8 463 aa11.38□□□□□ -0.59
SPTAN1-218ENST00000629137 ERC1Q8IUD2 1116 aa11.38□□□□□ -0.59
SPTAN1-218ENST00000629137 BBXQ8WY36 941 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-218ENST00000629137 DBNLQ9UJU6 430 aaKnown RBP11.38□□□□□ -0.59
SPTAN1-218ENST00000629137 SMARCA5O60264 1052 aaPredicted RBP11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 FSTL1Q12841 308 aa11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 NBPF9Q3BBW0 867 aa11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 GORABQ5T7V8 394 aa11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 DLK2Q6UY11 383 aa11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 AACSQ86V21 672 aa11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 KIF1BPQ96EK5 621 aa11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 GNL3LQ9NVN8 582 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 PGAP2Q9UHJ9 254 aa11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 SCAF8Q9UPN6 1271 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-218ENST00000629137 AOX1Q06278 1338 aa11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 RAB11FIP3O75154 756 aa11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 ITGBL1O95965 494 aaPredicted RBP11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 ARID4AP29374 1257 aaPredicted RBP11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 MCAMP43121 646 aa11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 CNTROBQ8N137 903 aa11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 OGFOD1Q8N543 542 aa11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 PTCD2Q8WV60 388 aaKnown RBP11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 DCTPP1Q9H773 170 aa11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 HMG20BQ9P0W2 317 aa11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 HDAC9Q9UKV0 1011 aa11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 DENND2AQ9ULE3 1009 aa11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 TTF2Q9UNY4 1162 aaKnown RBP11.36□□□□□ -0.59
SPTAN1-218ENST00000629137 TRAF5O00463 557 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 WNT10BO00744 389 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 SEMA3EO15041 775 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 PRDX5P30044 214 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 TTC39AQ5SRH9 613 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 ANGEL2Q5VTE6 544 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 ZNF687Q8N1G0 1237 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 WDR66Q8TBY9 1149 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 TBC1D22AQ8WUA7 517 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 ZBED3Q96IU2 234 aaPredicted RBP11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 GLIS2Q9BZE0 524 aaPredicted RBP11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 SNRKQ9NRH2 765 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 GGA3Q9NZ52 723 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 PASKQ96RG2 1323 aa11.35□□□□□ -0.59
SPTAN1-218ENST00000629137 PDE4AP27815 886 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 HTRA3P83110 453 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 CCDC158Q5M9N0 1113 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 TBC1D9Q6ZT07 1266 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 CLASRPQ8N2M8 674 aaKnown RBP11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 SPATA5Q8NB90 893 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 PRMT6Q96LA8 375 aaPredicted RBP11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 LRRCC1Q9C099 1032 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 NDUFB9Q9Y6M9 179 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 PDS5AQ29RF7 1337 aaKnown RBP11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 SALL1Q9NSC2 1324 aa11.34□□□□□ -0.59
SPTAN1-218ENST00000629137 AKAP11Q9UKA4 1901 aa11.33□□□□□ -0.6
SPTAN1-218ENST00000629137 ADM5C9JUS6 153 aa11.33□□□□□ -0.6
SPTAN1-218ENST00000629137 IGHDP01880 384 aa11.33□□□□□ -0.6
SPTAN1-218ENST00000629137 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
SPTAN1-218ENST00000629137 CRKP46108 304 aa11.33□□□□□ -0.6
SPTAN1-218ENST00000629137 RBM5P52756 815 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPTAN1-218ENST00000629137 DLGAP5Q15398 846 aa11.33□□□□□ -0.6
SPTAN1-218ENST00000629137 USP48Q86UV5 1035 aa11.33□□□□□ -0.6
SPTAN1-218ENST00000629137 DCPSQ96C86 337 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-218ENST00000629137 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
SPTAN1-218ENST00000629137 CLRN2A0PK11 232 aa11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 CYP2E1P05181 493 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 IFIT2P09913 472 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 HSPA6P17066 643 aa11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 ZAP70P43403 619 aa11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 MMP14P50281 582 aa11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 HDAC1Q13547 482 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 AAMPQ13685 434 aa11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 DIXDC1Q155Q3 683 aa11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 MTMR14Q8NCE2 650 aa11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 ZNF512BQ96KM6 892 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 LARP6Q9BRS8 491 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 ABCF2Q9UG63 623 aa11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 ECM29Q5VYK3 1845 aa11.32□□□□□ -0.6
SPTAN1-218ENST00000629137 LDHBP07195 334 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-218ENST00000629137 APLP1P51693 650 aa11.31□□□□□ -0.6
SPTAN1-218ENST00000629137 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
SPTAN1-218ENST00000629137 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
SPTAN1-218ENST00000629137 ZNF384Q8TF68 577 aa11.31□□□□□ -0.6
SPTAN1-218ENST00000629137 TEKT1Q969V4 418 aa11.31□□□□□ -0.6
SPTAN1-218ENST00000629137 ANTXR1Q9H6X2 564 aa11.31□□□□□ -0.6
SPTAN1-218ENST00000629137 TDRD3Q9H7E2 651 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-218ENST00000629137 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
SPTAN1-218ENST00000629137 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-218ENST00000629137 MYO5AQ9Y4I1 1855 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-218ENST00000629137 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-218ENST00000629137 MECOMQ03112 1051 aa11.3□□□□□ -0.6
SPTAN1-218ENST00000629137 PRAMEF18Q5VWM3 479 aa11.3□□□□□ -0.6
SPTAN1-218ENST00000629137 CST9Q5W186 159 aa11.3□□□□□ -0.6
SPTAN1-218ENST00000629137 TSHZ3Q63HK5 1081 aa11.3□□□□□ -0.6
SPTAN1-218ENST00000629137 APOBEC3HQ6NTF7 200 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-218ENST00000629137 ZGPATQ8N5A5 531 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms