RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 EZH1Q92800 747 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-223ENST00000628857 UTP4Q969X6 686 aaKnown RBP5.35□□□□□ -1.55
CNOT1-223ENST00000628857 FAM83CQ9BQN1 747 aa5.35□□□□□ -1.55
CNOT1-223ENST00000628857 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-223ENST00000628857 RBM47A0AV96 593 aaKnown RBP5.34□□□□□ -1.55
CNOT1-223ENST00000628857 AOC2O75106 756 aa5.34□□□□□ -1.55
CNOT1-223ENST00000628857 CTSBP07858 339 aa5.34□□□□□ -1.55
CNOT1-223ENST00000628857 PREPP48147 710 aa5.34□□□□□ -1.55
CNOT1-223ENST00000628857 C2CD4AQ8NCU7 369 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-223ENST00000628857 CRELD1Q96HD1 420 aa5.34□□□□□ -1.55
CNOT1-223ENST00000628857 SEMA6BQ9H3T3 888 aa5.34□□□□□ -1.55
CNOT1-223ENST00000628857 RAD18Q9NS91 495 aa5.34□□□□□ -1.55
CNOT1-223ENST00000628857 STOML1Q9UBI4 398 aa5.34□□□□□ -1.55
CNOT1-223ENST00000628857 ADH5P11766 374 aa5.33□□□□□ -1.56
CNOT1-223ENST00000628857 ZNF157P51786 506 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-223ENST00000628857 MRPL58Q14197 206 aaKnown RBP5.33□□□□□ -1.56
CNOT1-223ENST00000628857 TPTE2Q6XPS3 522 aa5.33□□□□□ -1.56
CNOT1-223ENST00000628857 WDR18Q9BV38 432 aa5.33□□□□□ -1.56
CNOT1-223ENST00000628857 YIPF2Q9BWQ6 316 aa5.33□□□□□ -1.56
CNOT1-223ENST00000628857 CCDC86Q9H6F5 360 aaKnown RBP5.33□□□□□ -1.56
CNOT1-223ENST00000628857 MRS2Q9HD23 443 aa5.33□□□□□ -1.56
CNOT1-223ENST00000628857 TTF2Q9UNY4 1162 aaKnown RBP5.33□□□□□ -1.56
CNOT1-223ENST00000628857 PCDHGC5Q9Y5F6 944 aa5.33□□□□□ -1.56
CNOT1-223ENST00000628857 GAS2O43903 313 aaKnown RBP5.32□□□□□ -1.56
CNOT1-223ENST00000628857 ZNF862O60290 1169 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 ECEL1O95672 775 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 CTSHP09668 335 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 BMP3P12645 472 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 ERVK-24P63145 666 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 PDE3AQ14432 1141 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 CPSF6Q16630 551 aaKnown RBP eCLIP5.32□□□□□ -1.56
CNOT1-223ENST00000628857 ZC3H12AQ5D1E8 599 aaKnown RBP5.32□□□□□ -1.56
CNOT1-223ENST00000628857 RNF43Q68DV7 783 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 GIPC2Q8TF65 315 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 ATXN3LQ9H3M9 355 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 RNF19AQ9NV58 838 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 CRIM1Q9NZV1 1036 aa5.32□□□□□ -1.56
CNOT1-223ENST00000628857 DRD2P14416 443 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 ZNF16P17020 682 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-223ENST00000628857 VAMP1P23763 118 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 MAP4P27816 1152 aaKnown RBP5.31□□□□□ -1.56
CNOT1-223ENST00000628857 USP11P51784 963 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 TAGLNQ01995 201 aaKnown RBP5.31□□□□□ -1.56
CNOT1-223ENST00000628857 ID3Q02535 119 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 MAP7Q14244 749 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 CCDC85BQ15834 202 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-223ENST00000628857 PRSS36Q5K4E3 855 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 PCNX4Q63HM2 1172 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 LLGL2Q6P1M3 1020 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 AGMOQ6ZNB7 445 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 CCDC84Q86UT8 332 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-223ENST00000628857 STK35Q8TDR2 534 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 KCNB2Q92953 911 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 RSRP1Q9BUV0 290 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 ACSS3Q9H6R3 686 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 TACC3Q9Y6A5 838 aa5.31□□□□□ -1.56
CNOT1-223ENST00000628857 TMPRSS2O15393 492 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 PAGE1O75459 146 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 IGLV1-40P01703 118 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 LIG1P18858 919 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 FSTP19883 344 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 ITGB7P26010 798 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 RING1Q06587 406 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 PWP1Q13610 501 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 TTBK2Q6IQ55 1244 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 BEND4Q6ZU67 534 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 PPP1R9AQ9ULJ8 1098 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 ACTL7BQ9Y614 415 aa5.3□□□□□ -1.56
CNOT1-223ENST00000628857 FAM95CA0A1B0GW59 222 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 CELA3AP09093 270 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 ASPAP45381 313 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 NFIAQ12857 509 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 AKAP4Q5JQC9 854 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 MAP1SQ66K74 1059 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-223ENST00000628857 CDPF1Q6NVV7 123 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 PAOXQ6QHF9 649 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 DYMQ7RTS9 669 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 RNF214Q8ND24 703 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 GIMAP7Q8NHV1 300 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 GPBAR1Q8TDU6 330 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 WDR89Q96FK6 387 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-223ENST00000628857 FANCD2OSQ96PS1 177 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 DBNDD2Q9BQY9 259 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 C7orf69Q9H7B7 122 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 CBX8Q9HC52 389 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 DISC1Q9NRI5 854 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 VTI1BQ9UEU0 232 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 RNF112Q9ULX5 631 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 CCDC9Q9Y3X0 531 aaKnown RBP5.29□□□□□ -1.56
CNOT1-223ENST00000628857 SNCAIPQ9Y6H5 919 aa5.29□□□□□ -1.56
CNOT1-223ENST00000628857 FANCGO15287 622 aa5.28□□□□□ -1.56
CNOT1-223ENST00000628857 FBXO24O75426 580 aa5.28□□□□□ -1.56
CNOT1-223ENST00000628857 LIG3P49916 1009 aa5.28□□□□□ -1.56
CNOT1-223ENST00000628857 SGO2Q562F6 1265 aa5.28□□□□□ -1.56
CNOT1-223ENST00000628857 MEI1Q5TIA1 1274 aa5.28□□□□□ -1.56
CNOT1-223ENST00000628857 DIEXFQ68CQ4 756 aaKnown RBP5.28□□□□□ -1.56
CNOT1-223ENST00000628857 SEZ6L2Q6UXD5 910 aa5.28□□□□□ -1.56
CNOT1-223ENST00000628857 TRIM42Q8IWZ5 723 aa5.28□□□□□ -1.56
CNOT1-223ENST00000628857 RGS22Q8NE09 1264 aa5.28□□□□□ -1.56
CNOT1-223ENST00000628857 GRIN3AQ8TCU5 1115 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms