RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 DNAJC2Q99543 621 aaKnown RBP16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 RWDD1Q9H446 243 aaPredicted RBP16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 USP40Q9NVE5 1235 aa16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 TMOD2Q9NZR1 351 aa16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 TRPM7Q96QT4 1865 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 RFX7Q2KHR2 1363 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 GOLIM4O00461 696 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 IDH1O75874 414 aaKnown RBP16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 TNNI2P48788 182 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 HUNKP57058 714 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 ANKRD45Q5TZF3 282 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 TSHZ3Q63HK5 1081 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 NAA16Q6N069 864 aaPredicted RBP16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 ADGRA1Q86SQ6 560 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 SMC5Q8IY18 1101 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 ECHDC1Q9NTX5 307 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 FZD1Q9UP38 647 aa16.54■□□□□ 0.24
SOX2-OT-246ENST00000628343 LDHCP07864 332 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 NF2P35240 595 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 VEGFBP49765 207 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 RHBDL3P58872 404 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 FKBP1BP68106 108 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 FAM83AQ86UY5 434 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 HHIPL1Q96JK4 782 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 HAUS7Q99871 368 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 FAM198AQ9UFP1 575 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 MAST2Q6P0Q8 1798 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 PAPPA2Q9BXP8 1791 aa16.53■□□□□ 0.24
SOX2-OT-246ENST00000628343 SALL3Q9BXA9 1300 aa16.52■□□□□ 0.24
SOX2-OT-246ENST00000628343 POLR2AP24928 1970 aaKnown RBP16.52■□□□□ 0.24
SOX2-OT-246ENST00000628343 IGSF3O75054 1194 aa16.52■□□□□ 0.24
SOX2-OT-246ENST00000628343 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
SOX2-OT-246ENST00000628343 PRKG1Q13976 671 aa16.52■□□□□ 0.24
SOX2-OT-246ENST00000628343 TTF1Q15361 905 aaPredicted RBP16.52■□□□□ 0.24
SOX2-OT-246ENST00000628343 CYP4F22Q6NT55 531 aa16.52■□□□□ 0.24
SOX2-OT-246ENST00000628343 PAG1Q9NWQ8 432 aa16.52■□□□□ 0.24
SOX2-OT-246ENST00000628343 RPAP1Q9BWH6 1393 aaPredicted RBP16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 UBE2Q2LH0YL09 131 aa16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 TCP10Q12799 353 aa16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 TTLL12Q14166 644 aaPredicted RBP16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 PAXIP1Q6ZW49 1069 aaPredicted RBP16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 ZFPM1Q8IX07 1006 aa16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 MAGEB6Q8N7X4 407 aa16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 JMYQ8N9B5 988 aa16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 FAM151AQ8WW52 585 aa16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 GPATCH3Q96I76 525 aa16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 CAPNS2Q96L46 248 aa16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 IDI2Q9BXS1 227 aa16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 DDX4Q9NQI0 724 aaKnown RBP16.51■□□□□ 0.23
SOX2-OT-246ENST00000628343 WDR33Q9C0J8 1336 aaKnown RBP16.5■□□□□ 0.23
SOX2-OT-246ENST00000628343 CYP7A1P22680 504 aa16.5■□□□□ 0.23
SOX2-OT-246ENST00000628343 RGS3P49796 1198 aa16.5■□□□□ 0.23
SOX2-OT-246ENST00000628343 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
SOX2-OT-246ENST00000628343 RGMBQ6NW40 437 aa16.5■□□□□ 0.23
SOX2-OT-246ENST00000628343 PI4K2BQ8TCG2 481 aa16.5■□□□□ 0.23
SOX2-OT-246ENST00000628343 AATFQ9NY61 560 aaKnown RBP eCLIP16.5■□□□□ 0.23
SOX2-OT-246ENST00000628343 TTC41PQ6P2S7 1318 aa16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 PDE6AP16499 860 aa16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 MX1P20591 662 aa16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 GRM1Q13255 1194 aa16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 PICALMQ13492 652 aa16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 MAP3K11Q16584 847 aa16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 B4GALNT3Q6L9W6 998 aa16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 ARMC9Q7Z3E5 817 aa16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 SH3RF3Q8TEJ3 882 aaPredicted RBP16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 LNPKQ9C0E8 428 aa16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 ZBTB47Q9UFB7 747 aaPredicted RBP16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 ANGEL1Q9UNK9 670 aaKnown RBP16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 MYH2Q9UKX2 1941 aa16.49■□□□□ 0.23
SOX2-OT-246ENST00000628343 DOCK2Q92608 1830 aa16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 ENTPD3O75355 529 aa16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 BAG3O95817 575 aa16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 MAP4K4O95819 1239 aaPredicted RBP16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 ECE1P42892 770 aa16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 PPP4CP60510 307 aa16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 DYNLL1P63167 89 aaKnown RBP16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 NUCB1Q02818 461 aa16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 LDLRAD1Q5T700 205 aa16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 SH3BP5LQ7L8J4 393 aa16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 MIGA1Q8NAN2 632 aa16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 NOL10Q9BSC4 688 aaKnown RBP16.48■□□□□ 0.23
SOX2-OT-246ENST00000628343 TCRBV5S4A2TA0A5A2 114 aa16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 FAM155AB1AL88 458 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 PPP1R12BO60237 982 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 AOC2O75106 756 aa16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 USP2O75604 605 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 CHGBP05060 677 aa16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 ZNF157P51786 506 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 SLFNL1Q499Z3 407 aa16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 TMED8Q6PL24 325 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 CHD1LQ86WJ1 897 aa16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 TEX11Q8IYF3 940 aa16.47■□□□□ 0.23
SOX2-OT-246ENST00000628343 ZNF532Q9HCE3 1301 aa16.46■□□□□ 0.23
SOX2-OT-246ENST00000628343 THSD7BQ9C0I4 1608 aa16.46■□□□□ 0.23
SOX2-OT-246ENST00000628343 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
SOX2-OT-246ENST00000628343 GLRX3O76003 335 aaKnown RBP16.46■□□□□ 0.23
SOX2-OT-246ENST00000628343 SLC10A3P09131 477 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms