RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 TSPAN15O95858 294 aa6.64□□□□□ -1.35
VBP1-204ENST00000625964 NOM1Q5C9Z4 860 aaKnown RBP6.64□□□□□ -1.35
VBP1-204ENST00000625964 PLD6Q8N2A8 252 aaKnown RBP6.64□□□□□ -1.35
VBP1-204ENST00000625964 CLP1Q92989 425 aaKnown RBP6.64□□□□□ -1.35
VBP1-204ENST00000625964 CLEC4MQ9H2X3 399 aaPredicted RBP6.64□□□□□ -1.35
VBP1-204ENST00000625964 B8ZZF3 427 aa6.63□□□□□ -1.35
VBP1-204ENST00000625964 DYNC1LI2O43237 492 aaPredicted RBP6.63□□□□□ -1.35
VBP1-204ENST00000625964 PCDH1Q08174 1060 aa6.63□□□□□ -1.35
VBP1-204ENST00000625964 IFI16Q16666 785 aaKnown RBP6.63□□□□□ -1.35
VBP1-204ENST00000625964 SLC23A3Q6PIS1 610 aa6.63□□□□□ -1.35
VBP1-204ENST00000625964 ZSWIM9Q86XI8 627 aa6.63□□□□□ -1.35
VBP1-204ENST00000625964 SNX29Q8TEQ0 813 aa6.63□□□□□ -1.35
VBP1-204ENST00000625964 STK32AQ8WU08 396 aa6.63□□□□□ -1.35
VBP1-204ENST00000625964 TNFRSF21O75509 655 aa6.62□□□□□ -1.35
VBP1-204ENST00000625964 EHHADHQ08426 723 aa6.62□□□□□ -1.35
VBP1-204ENST00000625964 CORO1BQ9BR76 489 aa6.62□□□□□ -1.35
VBP1-204ENST00000625964 TMEM265A0A087WTH1 108 aa6.61□□□□□ -1.35
VBP1-204ENST00000625964 A6NHS1 94 aa6.61□□□□□ -1.35
VBP1-204ENST00000625964 CTSBP07858 339 aa6.61□□□□□ -1.35
VBP1-204ENST00000625964 ANGEL2Q5VTE6 544 aaKnown RBP6.61□□□□□ -1.35
VBP1-204ENST00000625964 ALKBH2Q6NS38 261 aa6.61□□□□□ -1.35
VBP1-204ENST00000625964 C1QL4Q86Z23 238 aa6.61□□□□□ -1.35
VBP1-204ENST00000625964 PBXIP1Q96AQ6 731 aa6.61□□□□□ -1.35
VBP1-204ENST00000625964 HRASLS5Q96KN8 279 aa6.61□□□□□ -1.35
VBP1-204ENST00000625964 ARID3AQ99856 593 aa6.61□□□□□ -1.35
VBP1-204ENST00000625964 AMOTL2Q9Y2J4 779 aa6.61□□□□□ -1.35
VBP1-204ENST00000625964 A0A096LPE4 126 aa6.6□□□□□ -1.35
VBP1-204ENST00000625964 A0A1W2PPZ6 126 aa6.6□□□□□ -1.35
VBP1-204ENST00000625964 KCNMB1Q16558 191 aa6.6□□□□□ -1.35
VBP1-204ENST00000625964 MLANAQ16655 118 aa6.6□□□□□ -1.35
VBP1-204ENST00000625964 AOC3Q16853 763 aa6.6□□□□□ -1.35
VBP1-204ENST00000625964 ZNF423Q2M1K9 1284 aa6.6□□□□□ -1.35
VBP1-204ENST00000625964 PEAR1Q5VY43 1037 aaPredicted RBP6.6□□□□□ -1.35
VBP1-204ENST00000625964 ANKLE2Q86XL3 938 aa6.6□□□□□ -1.35
VBP1-204ENST00000625964 LRRC56Q8IYG6 542 aaPredicted RBP6.6□□□□□ -1.35
VBP1-204ENST00000625964 HELQQ8TDG4 1101 aa6.6□□□□□ -1.35
VBP1-204ENST00000625964 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.6□□□□□ -1.35
VBP1-204ENST00000625964 AOC2O75106 756 aa6.6□□□□□ -1.35
VBP1-204ENST00000625964 FAM87AP0C7U9 286 aa6.6□□□□□ -1.35
VBP1-204ENST00000625964 ATG7O95352 703 aa6.59□□□□□ -1.35
VBP1-204ENST00000625964 USP5P45974 858 aa6.59□□□□□ -1.35
VBP1-204ENST00000625964 SRPK2P78362 688 aaKnown RBP6.59□□□□□ -1.35
VBP1-204ENST00000625964 LCNL1Q6ZST4 164 aa6.59□□□□□ -1.35
VBP1-204ENST00000625964 SEPT3Q9UH03 358 aa6.59□□□□□ -1.35
VBP1-204ENST00000625964 SNX11Q9Y5W9 270 aa6.59□□□□□ -1.35
VBP1-204ENST00000625964 ZNF503-AS2A6NEH8 195 aa6.58□□□□□ -1.36
VBP1-204ENST00000625964 ZSCAN22P10073 491 aaPredicted RBP6.58□□□□□ -1.36
VBP1-204ENST00000625964 ARHGAP27Q6ZUM4 889 aa6.58□□□□□ -1.36
VBP1-204ENST00000625964 TTLL10Q6ZVT0 673 aa6.58□□□□□ -1.36
VBP1-204ENST00000625964 CCNJLQ8IV13 435 aa6.58□□□□□ -1.36
VBP1-204ENST00000625964 FAM181AQ8N9Y4 354 aa6.58□□□□□ -1.36
VBP1-204ENST00000625964 LGR6Q9HBX8 967 aa6.58□□□□□ -1.36
VBP1-204ENST00000625964 METTL12A8MUP2 240 aa6.57□□□□□ -1.36
VBP1-204ENST00000625964 CEACAM5P06731 702 aa6.57□□□□□ -1.36
VBP1-204ENST00000625964 EIF1AXP47813 144 aaKnown RBP6.57□□□□□ -1.36
VBP1-204ENST00000625964 TMEM164Q5U3C3 297 aa6.57□□□□□ -1.36
VBP1-204ENST00000625964 WDR18Q9BV38 432 aa6.57□□□□□ -1.36
VBP1-204ENST00000625964 CD96P40200 585 aa6.56□□□□□ -1.36
VBP1-204ENST00000625964 OXCT1P55809 520 aa6.56□□□□□ -1.36
VBP1-204ENST00000625964 TRIM56Q9BRZ2 755 aaKnown RBP6.56□□□□□ -1.36
VBP1-204ENST00000625964 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
VBP1-204ENST00000625964 ATXN3LQ9H3M9 355 aa6.56□□□□□ -1.36
VBP1-204ENST00000625964 PIDD1Q9HB75 910 aa6.56□□□□□ -1.36
VBP1-204ENST00000625964 LATS2Q9NRM7 1088 aa6.56□□□□□ -1.36
VBP1-204ENST00000625964 CRIM1Q9NZV1 1036 aa6.56□□□□□ -1.36
VBP1-204ENST00000625964 PPP1R9AQ9ULJ8 1098 aa6.56□□□□□ -1.36
VBP1-204ENST00000625964 POLIQ9UNA4 740 aa6.56□□□□□ -1.36
VBP1-204ENST00000625964 B3GALT4O96024 378 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 AFMP43652 599 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 HNRNPUQ00839 825 aaKnown RBP eCLIP6.55□□□□□ -1.36
VBP1-204ENST00000625964 CDK5R2Q13319 367 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 PDE3AQ14432 1141 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 AMIGO3Q86WK7 504 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 ZFYVE28Q9HCC9 887 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 FOXD3Q9UJU5 478 aaPredicted RBP6.55□□□□□ -1.36
VBP1-204ENST00000625964 PPP1R15AO75807 674 aaPredicted RBP6.55□□□□□ -1.36
VBP1-204ENST00000625964 SLFN14P0C7P3 912 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 ATP2B4P23634 1241 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 AP3B2Q13367 1082 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 SYDE1Q6ZW31 735 aaPredicted RBP6.55□□□□□ -1.36
VBP1-204ENST00000625964 TNKS2Q9H2K2 1166 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 LMCD1Q9NZU5 365 aa6.55□□□□□ -1.36
VBP1-204ENST00000625964 TMPRSS2O15393 492 aa6.54□□□□□ -1.36
VBP1-204ENST00000625964 SMYD4Q8IYR2 804 aaPredicted RBP6.54□□□□□ -1.36
VBP1-204ENST00000625964 ASB11Q8WXH4 323 aa6.54□□□□□ -1.36
VBP1-204ENST00000625964 LIN7BQ9HAP6 207 aa6.54□□□□□ -1.36
VBP1-204ENST00000625964 PLAGL2Q9UPG8 496 aa6.54□□□□□ -1.36
VBP1-204ENST00000625964 NFIBO00712 420 aa6.53□□□□□ -1.36
VBP1-204ENST00000625964 ECEL1O95672 775 aa6.53□□□□□ -1.36
VBP1-204ENST00000625964 MPSTP25325 297 aa6.53□□□□□ -1.36
VBP1-204ENST00000625964 BUD31P41223 144 aaPredicted RBP6.53□□□□□ -1.36
VBP1-204ENST00000625964 GRIA4P48058 902 aa6.53□□□□□ -1.36
VBP1-204ENST00000625964 TCF12Q99081 682 aa6.53□□□□□ -1.36
VBP1-204ENST00000625964 A0A1W2PP55 124 aa6.52□□□□□ -1.37
VBP1-204ENST00000625964 GLI1P08151 1106 aa6.52□□□□□ -1.37
VBP1-204ENST00000625964 SPRED3Q2MJR0 410 aa6.52□□□□□ -1.37
VBP1-204ENST00000625964 GALNT12Q8IXK2 581 aa6.52□□□□□ -1.37
VBP1-204ENST00000625964 LIN37Q96GY3 246 aaPredicted RBP6.52□□□□□ -1.37
VBP1-204ENST00000625964 FANCD2OSQ96PS1 177 aa6.52□□□□□ -1.37
VBP1-204ENST00000625964 DUSP23Q9BVJ7 150 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms