RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 MIGA1Q8NAN2 632 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 SLC17A8Q8NDX2 589 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 SLC16A10Q8TF71 515 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 CDHR1Q96JP9 859 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 CAVIN2O95810 425 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 ASIC1P78348 528 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 ARHGEF16Q5VV41 709 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 MFSD14CQ5VZR4 134 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 CHST3Q7LGC8 479 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 CCDC169A6NNP5 214 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 GNAT1P11488 350 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 COPB2P35606 906 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 KRT2P35908 639 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 TFDP1Q14186 410 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 MICAL1Q8TDZ2 1067 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 ALG1Q9BT22 464 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 MIS12Q9H081 205 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 TXNDC16Q9P2K2 825 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 ODF2LQ9ULJ1 636 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
VPS8-227ENST00000625842 TMCO5BA8MYB1 307 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 SEMA3EO15041 775 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 ELF1P32519 619 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 IL6STP40189 918 aaPredicted RBP12.51□□□□□ -0.41
VPS8-227ENST00000625842 TCP10Q12799 353 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 KRT26Q7Z3Y9 468 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 CTAGE1Q96RT6 745 aa12.51□□□□□ -0.41
VPS8-227ENST00000625842 NUP88Q99567 741 aaPredicted RBP12.51□□□□□ -0.41
VPS8-227ENST00000625842 ARPP21Q9UBL0 812 aaPredicted RBP12.51□□□□□ -0.41
VPS8-227ENST00000625842 SAP30BPQ9UHR5 308 aaKnown RBP12.51□□□□□ -0.41
VPS8-227ENST00000625842 FAM83GA6ND36 823 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 POLR2BP30876 1174 aaKnown RBP12.5□□□□□ -0.41
VPS8-227ENST00000625842 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
VPS8-227ENST00000625842 ATP8B2P98198 1209 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 NBPF11Q86T75 865 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 RNF169Q8NCN4 708 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 GPCPD1Q9NPB8 672 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 IBTKQ9P2D0 1353 aaPredicted RBP12.5□□□□□ -0.41
VPS8-227ENST00000625842 EDC4Q6P2E9 1401 aaKnown RBP12.5□□□□□ -0.41
VPS8-227ENST00000625842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
VPS8-227ENST00000625842 RRAGBQ5VZM2 374 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.5□□□□□ -0.41
VPS8-227ENST00000625842 JARID2Q92833 1246 aaPredicted RBP12.5□□□□□ -0.41
VPS8-227ENST00000625842 ZNF215Q9UL58 517 aaPredicted RBP12.5□□□□□ -0.41
VPS8-227ENST00000625842 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
VPS8-227ENST00000625842 CBX1P83916 185 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 DTHD1Q6ZMT9 781 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 APOBEC3FQ8IUX4 373 aaKnown RBP12.5□□□□□ -0.41
VPS8-227ENST00000625842 DYDC1Q8WWB3 177 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 CCDC114Q96M63 670 aa12.5□□□□□ -0.41
VPS8-227ENST00000625842 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 KIF5CO60282 957 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 CCDC144CPQ8IYA2 1237 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 NLRP1Q9C000 1473 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 SYCP2Q9BX26 1530 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 FLOT1O75955 427 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 PPP1R14CQ8TAE6 165 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 TMEM87BQ96K49 555 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 MAK16Q9BXY0 300 aaKnown RBP12.49□□□□□ -0.41
VPS8-227ENST00000625842 HELLSQ9NRZ9 838 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 DDX19AQ9NUU7 478 aaKnown RBP12.49□□□□□ -0.41
VPS8-227ENST00000625842 CWC15Q9P013 229 aaKnown RBP12.49□□□□□ -0.41
VPS8-227ENST00000625842 PLCD1P51178 756 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 MAP9Q49MG5 647 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 KCNG4Q8TDN1 519 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 ZNF830Q96NB3 372 aaPredicted RBP12.49□□□□□ -0.41
VPS8-227ENST00000625842 POLKQ9UBT6 870 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 FAM169AQ9Y6X4 670 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 DAPK3O43293 454 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 MBD4O95243 580 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 USPL1Q5W0Q7 1092 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 DAAM2Q86T65 1068 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 KIAA0825Q8IV33 1275 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 CCDC77Q9BR77 488 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 TSPYL1Q9H0U9 437 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 RABGAP1Q9Y3P9 1069 aa12.49□□□□□ -0.41
VPS8-227ENST00000625842 TCP10L2B9ZVM9 353 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 CCDC175P0C221 793 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 TOP1P11387 765 aaKnown RBP12.48□□□□□ -0.41
VPS8-227ENST00000625842 SFPQP23246 707 aaKnown RBP eCLIP12.48□□□□□ -0.41
VPS8-227ENST00000625842 ATP2A2P16615 1042 aaKnown RBP12.48□□□□□ -0.41
VPS8-227ENST00000625842 CCT6AP40227 531 aaKnown RBP12.48□□□□□ -0.41
VPS8-227ENST00000625842 BCAMP50895 628 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 DEPTORQ8TB45 409 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 SWAP70Q9UH65 585 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 SRGAP2BP0DMP2 458 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 ABCD1P33897 745 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 CERKLQ49MI3 558 aaPredicted RBP12.48□□□□□ -0.41
VPS8-227ENST00000625842 DHX36Q9H2U1 1008 aaKnown RBP12.48□□□□□ -0.41
VPS8-227ENST00000625842 FBXO40Q9UH90 709 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 PRPF6O94906 941 aaKnown RBP12.48□□□□□ -0.41
VPS8-227ENST00000625842 OATP04181 439 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 RNASELQ05823 741 aaKnown RBP12.48□□□□□ -0.41
VPS8-227ENST00000625842 KRT25Q7Z3Z0 450 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 METTL23Q86XA0 190 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 RAET1EQ8TD07 263 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 IQCGQ9H095 443 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms