RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 EXOC1Q9NV70 894 aa13.4□□□□□ -0.26
CHD2-205ENST00000625662 PCP11498 1178 aaKnown RBP13.39□□□□□ -0.27
CHD2-205ENST00000625662 NT5C2P49902 561 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 CACNA2D4Q7Z3S7 1137 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 ANO10Q9NW15 660 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 DIP2AQ14689 1571 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 PTPDC1A2A3K4 754 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 PHACTR2O75167 634 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 TIMM10P62072 90 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 G2E3Q7L622 706 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 CCDC117Q8IWD4 279 aaPredicted RBP13.39□□□□□ -0.27
CHD2-205ENST00000625662 USP31Q70CQ4 1352 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 BRD2P25440 801 aaKnown RBP13.39□□□□□ -0.27
CHD2-205ENST00000625662 RC3H1Q5TC82 1133 aaKnown RBP13.39□□□□□ -0.27
CHD2-205ENST00000625662 ERCC4Q92889 916 aaPredicted RBP13.39□□□□□ -0.27
CHD2-205ENST00000625662 ZNF594Q96JF6 807 aaPredicted RBP13.39□□□□□ -0.27
CHD2-205ENST00000625662 ARMT1Q9H993 441 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 TCP10L2B9ZVM9 353 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 MAPKAPK5Q8IW41 473 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 TGFBRAP1Q8WUH2 860 aa13.39□□□□□ -0.27
CHD2-205ENST00000625662 DHX32Q7L7V1 743 aaKnown RBP13.38□□□□□ -0.27
CHD2-205ENST00000625662 SLC10A4Q96EP9 437 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 DHX36Q9H2U1 1008 aaKnown RBP13.38□□□□□ -0.27
CHD2-205ENST00000625662 ATG3Q9NT62 314 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 HOXD10P28358 340 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 MAP3K11Q16584 847 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 KBTBD3Q8NAB2 608 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 FRMPD1Q5SYB0 1578 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 SPATA31A1Q5TZJ5 1347 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 TRIM75PA6NK02 468 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 FAM13AO94988 1023 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 LRSAM1Q6UWE0 723 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 TAF4BQ92750 862 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 DBNDD2Q9BQY9 259 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 GPR108Q9NPR9 543 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 SPHKAPQ2M3C7 1700 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 SSR1P43307 286 aaKnown RBP13.38□□□□□ -0.27
CHD2-205ENST00000625662 TBC1D9Q6ZT07 1266 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 APOBEC3FQ8IUX4 373 aaKnown RBP13.38□□□□□ -0.27
CHD2-205ENST00000625662 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
CHD2-205ENST00000625662 KCTD2Q14681 263 aa13.37□□□□□ -0.27
CHD2-205ENST00000625662 IQCEQ6IPM2 695 aa13.37□□□□□ -0.27
CHD2-205ENST00000625662 ARGLU1Q9NWB6 273 aaPredicted RBP13.37□□□□□ -0.27
CHD2-205ENST00000625662 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
CHD2-205ENST00000625662 HAUS3Q68CZ6 603 aa13.37□□□□□ -0.27
CHD2-205ENST00000625662 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
CHD2-205ENST00000625662 PAGR1Q9BTK6 254 aa13.37□□□□□ -0.27
CHD2-205ENST00000625662 MRPL11Q9Y3B7 192 aaKnown RBP13.37□□□□□ -0.27
CHD2-205ENST00000625662 COL15A1P39059 1388 aa13.37□□□□□ -0.27
CHD2-205ENST00000625662 CERKLQ49MI3 558 aaPredicted RBP13.37□□□□□ -0.27
CHD2-205ENST00000625662 CAVIN1Q6NZI2 390 aaKnown RBP13.37□□□□□ -0.27
CHD2-205ENST00000625662 NSMFQ6X4W1 530 aa13.37□□□□□ -0.27
CHD2-205ENST00000625662 GUCY1B3Q02153 619 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 ZYXQ15942 572 aaKnown RBP13.36□□□□□ -0.27
CHD2-205ENST00000625662 HS2ST1Q7LGA3 356 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 IFT74Q96LB3 600 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 GPAA1O43292 621 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 STAT6P42226 847 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 BTDP43251 543 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 PPM1FP49593 454 aaPredicted RBP13.36□□□□□ -0.27
CHD2-205ENST00000625662 SMTNP53814 917 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 R3HDM1Q15032 1099 aaKnown RBP13.36□□□□□ -0.27
CHD2-205ENST00000625662 TRMT1LQ7Z2T5 733 aaKnown RBP13.36□□□□□ -0.27
CHD2-205ENST00000625662 KCNG4Q8TDN1 519 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 EPB41L2O43491 1005 aaKnown RBP13.36□□□□□ -0.27
CHD2-205ENST00000625662 CCDC102BQ68D86 513 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 BACH2Q9BYV9 841 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 TCERG1LQ5VWI1 586 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 FERMT3Q86UX7 667 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
CHD2-205ENST00000625662 Q6ZUG5 572 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 DDX19AQ9NUU7 478 aaKnown RBP13.35□□□□□ -0.27
CHD2-205ENST00000625662 INO80Q9ULG1 1556 aaPredicted RBP13.35□□□□□ -0.27
CHD2-205ENST00000625662 SPATA31A5Q5VU36 1347 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 SPATA31A7Q8IWB4 1347 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
CHD2-205ENST00000625662 BRIP1Q9BX63 1249 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 SPA17Q15506 151 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 NR1I2O75469 434 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 USP17L8P0C7I0 530 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 ATP5JP18859 108 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 GJB2P29033 226 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 MTIF2P46199 727 aaKnown RBP13.35□□□□□ -0.27
CHD2-205ENST00000625662 FMNL3Q8IVF7 1028 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 ZBTB40Q9NUA8 1239 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 CLTCL1P53675 1640 aa13.35□□□□□ -0.27
CHD2-205ENST00000625662 PDE8BO95263 885 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 NLRP10Q86W26 655 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 CPXCR1Q8N123 301 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 EXOC7Q9UPT5 735 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 ADCY7P51828 1080 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 PODNQ7Z5L7 613 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 DPP9Q86TI2 863 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 ZNF532Q9HCE3 1301 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 ABCB5Q2M3G0 1257 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 AP5M1Q9H0R1 490 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 ADD3Q9UEY8 706 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms