RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 SF3A1Q15459 793 aaKnown RBP4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 LINC00114Q6XXX2 140 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 GPBAR1Q8TDU6 330 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 UBASH3BQ8TF42 649 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 GATAD2BQ8WXI9 593 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 DHX38Q92620 1227 aaKnown RBP4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 WNT8BQ93098 351 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 DRC1Q96MC2 740 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 NT5C1AQ9BXI3 368 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 USP26Q9BXU7 913 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 MIR1-1HGQ9H1L0 117 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 POLR3KQ9Y2Y1 108 aaPredicted RBP4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 A0A0A0MRY4 1105 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 LOC105371045A0A1W2PR82 267 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 FAM177BA6PVY3 158 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 FAM229AH3BQW9 127 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 GNL2Q13823 731 aaKnown RBP4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 POU4F3Q15319 338 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 SEZ6Q53EL9 994 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 CCDC81Q6ZN84 652 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 UBXN4Q92575 508 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 JARID2Q92833 1246 aaPredicted RBP4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 KCNB2Q92953 911 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 DNAJC2Q99543 621 aaKnown RBP4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 RRAGCQ9HB90 399 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 OSGEPQ9NPF4 335 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 PPP1R1BQ9UD71 204 aaPredicted RBP4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 CYP8B1Q9UNU6 501 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 EFR3BQ9Y2G0 817 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 SAMM50Q9Y512 469 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 PCDHGC5Q9Y5F6 944 aa4.37□□□□□ -1.71
SCARNA4-202ENST00000625402 DLL1O00548 723 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 TRIM37O94972 964 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 SOX9P48436 509 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 INPP5AQ14642 412 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 WIPI1Q5MNZ9 446 aaPredicted RBP4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 FAM117BQ6P1L5 589 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 REC114Q7Z4M0 266 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 CCDC84Q86UT8 332 aaPredicted RBP4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 SLITRK4Q8IW52 837 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 FMR1NBQ8N0W7 255 aaPredicted RBP4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 KLHL23Q8NBE8 558 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 NEDD1Q8NHV4 660 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 CORO1BQ9BR76 489 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 WDR18Q9BV38 432 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 PPT2Q9UMR5 302 aa4.36□□□□□ -1.71
SCARNA4-202ENST00000625402 CYP11A1P05108 521 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 LIG1P18858 919 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 CD68P34810 354 aaPredicted RBP4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 INSM1Q01101 510 aaPredicted RBP4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 MPP2Q14168 576 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 SUZ12Q15022 739 aaKnown RBP4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 LRRC14Q15048 493 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 TRAPPC3LQ5T215 181 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 LRFN4Q6PJG9 635 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 FAM169BQ8N8A8 192 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 PLPPR2Q96GM1 343 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 SEC16BQ96JE7 1060 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 PLVAPQ9BX97 442 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 EMILIN2Q9BXX0 1053 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 ZNF408Q9H9D4 720 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 BRMS1Q9HCU9 246 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 KRT82Q9NSB4 513 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 CORINQ9Y5Q5 1042 aa4.35□□□□□ -1.71
SCARNA4-202ENST00000625402 GNB5O14775 395 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 GRIN3BO60391 1043 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 ATP2B1P20020 1258 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 LMNB1P20700 586 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 NTF4P34130 210 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 GTF2F1P35269 517 aaKnown RBP eCLIP4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 ARL4DP49703 201 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 RPL6Q02878 288 aaKnown RBP4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 CLCQ05315 142 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 PDE3AQ14432 1141 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 KIF4BQ2VIQ3 1234 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 SHISA2Q6UWI4 295 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 KIAA1211Q6ZU35 1233 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 FBXO11Q86XK2 927 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 MAP4K3Q8IVH8 894 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 DTWD1Q8N5C7 304 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 ZSCAN1Q8NBB4 408 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 DDX54Q8TDD1 881 aaKnown RBP4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 NKD1Q969G9 470 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 ACSBG1Q96GR2 724 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 SHDQ96IW2 340 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 ZNRF3Q9ULT6 936 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 PCDHA4Q9UN74 947 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 MRVI1Q9Y6F6 885 aa4.34□□□□□ -1.71
SCARNA4-202ENST00000625402 ROBO2Q9HCK4 1378 aa4.33□□□□□ -1.72
SCARNA4-202ENST00000625402 DCDC2CA8MYV0 355 aa4.33□□□□□ -1.72
SCARNA4-202ENST00000625402 GFRA2O00451 464 aa4.33□□□□□ -1.72
SCARNA4-202ENST00000625402 DNAJA2O60884 412 aa4.33□□□□□ -1.72
SCARNA4-202ENST00000625402 AOC2O75106 756 aa4.33□□□□□ -1.72
SCARNA4-202ENST00000625402 BPNT1O95861 308 aa4.33□□□□□ -1.72
SCARNA4-202ENST00000625402 COL8A1P27658 744 aa4.33□□□□□ -1.72
SCARNA4-202ENST00000625402 ETFBP38117 255 aa4.33□□□□□ -1.72
SCARNA4-202ENST00000625402 CWF19L2Q2TBE0 894 aaKnown RBP4.33□□□□□ -1.72
SCARNA4-202ENST00000625402 SCARA3Q6AZY7 606 aa4.33□□□□□ -1.72
SCARNA4-202ENST00000625402 GK5Q6ZS86 529 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms