RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 CHMP6Q96FZ7 201 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 ATP6V0A2Q9Y487 856 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 FAM193AP78312 1265 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 DALRD3Q5D0E6 543 aaKnown RBP7.05□□□□□ -1.28
CDKL5-205ENST00000623535 ZC3H15Q8WU90 426 aaKnown RBP7.05□□□□□ -1.28
CDKL5-205ENST00000623535 OXCT2Q9BYC2 517 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-205ENST00000623535 VPS52Q8N1B4 723 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 ANKRD50Q9ULJ7 1429 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 PPARGP37231 505 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-205ENST00000623535 HEATR3Q7Z4Q2 680 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 ZBTB3Q9H5J0 574 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 ZSCAN12O43309 604 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 PKNOX2Q96KN3 472 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 ADD3Q9UEY8 706 aaKnown RBP7.05□□□□□ -1.28
CDKL5-205ENST00000623535 TNRQ92752 1358 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 CCDC66A2RUB6 948 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 CCDC15Q0P6D6 951 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 METTL13Q8N6R0 699 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 NSRP1Q9H0G5 558 aaKnown RBP7.04□□□□□ -1.28
CDKL5-205ENST00000623535 AFAP1Q8N556 730 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 DONSONQ9NYP3 566 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 NUB1Q9Y5A7 615 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 ATXN3P54252 364 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-205ENST00000623535 PDE4DQ08499 809 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 FIBPO43427 364 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 IFNA8P32881 189 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 MFSD14CQ5VZR4 134 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 CCDC65Q8IXS2 484 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 WDR66Q8TBY9 1149 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 RABGGTAQ92696 567 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 ERBINQ96RT1 1412 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 DENND4BO75064 1496 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-205ENST00000623535 FAM160B1Q5W0V3 765 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 SDE2Q6IQ49 451 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 MPNDQ8N594 471 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 NCOA7Q8NI08 942 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 MAGEB6P1A0A0J9YX57 407 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 NLGN1Q8N2Q7 840 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 SPECC1L-ADORA2AF8WAN1 911 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 OCM2P0CE71 109 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 OCMP0CE72 109 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-205ENST00000623535 SLC10A4Q96EP9 437 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 TRAIPQ9BWF2 469 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 SLC13A4Q9UKG4 626 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 HLTFQ14527 1009 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDKL5-205ENST00000623535 UBXN4Q92575 508 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 RIC8AQ9NPQ8 531 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 DENND2AQ9ULE3 1009 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 ACTN1P12814 892 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 IARSP41252 1262 aaKnown RBP7.04□□□□□ -1.28
CDKL5-205ENST00000623535 CLUL1Q15846 466 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 IPO4Q8TEX9 1081 aaKnown RBP7.04□□□□□ -1.28
CDKL5-205ENST00000623535 PAXBP1Q9Y5B6 917 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 KIF2AO00139 706 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-205ENST00000623535 KLHL10Q6JEL2 608 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 RAB42Q8N4Z0 105 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 CHURC1Q8WUH1 139 aa7.04□□□□□ -1.28
CDKL5-205ENST00000623535 AKAP7Q9P0M2 348 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-205ENST00000623535 KIF21BO75037 1637 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 RARSP54136 660 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 FBXW10Q5XX13 1052 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 MTERF4Q7Z6M4 381 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 ANKRD24Q8TF21 1146 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 PRDM5Q9NQX1 630 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 TFDP1Q14186 410 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 MFSD1Q9H3U5 465 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 PPME1Q9Y570 386 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 USH1CQ9Y6N9 552 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 EFCAB14O75071 495 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 PARP1P09874 1014 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 HARSP12081 509 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 ITIH3Q06033 890 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 ARHGEF1Q92888 912 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 CAPN15O75808 1086 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 ZNF18P17022 549 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 STAT6P42226 847 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 JAKMIP1Q96N16 626 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 MMTAG2Q9BU76 263 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 QTRT2Q9H974 415 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 USP14P54578 494 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 CC2D1AQ6P1N0 951 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 CWC27Q6UX04 472 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 ZFP91Q96JP5 570 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 POLIQ9UNA4 740 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 SH2D4BQ5SQS7 431 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 ANKRD35Q8N283 1001 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 URGCPQ8TCY9 931 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 TRIM45Q9H8W5 580 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 DYRK4Q9NR20 520 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 UBXN8O00124 270 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 CIITAP33076 1130 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 EFHBQ8N7U6 833 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 HAUS1Q96CS2 278 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 TRIM56Q9BRZ2 755 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 CPSF3Q9UKF6 684 aaKnown RBP7.03□□□□□ -1.28
CDKL5-205ENST00000623535 PTK2BQ14289 1009 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 NCAPG2Q86XI2 1143 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 CNNM3Q8NE01 707 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 NLRP7Q8WX94 980 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 TSPY26PQ9H489 355 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms