RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 HHIPL2Q6UWX4 724 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 GMLQ99445 158 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 CDK5RAP2Q96SN8 1893 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 ZNF541Q9H0D2 1346 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 PPP4CP60510 307 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 HDLBPQ00341 1268 aaKnown RBP21.29■■□□□ 1
PTCHD3-202ENST00000622555 MRIQ9BWK5 157 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 CRNKL1Q9BZJ0 848 aaKnown RBP21.29■■□□□ 1
PTCHD3-202ENST00000622555 PATL2C9JE40 543 aaKnown RBP21.28■■□□□ 1
PTCHD3-202ENST00000622555 RBM5P52756 815 aaKnown RBP eCLIP21.28■■□□□ 1
PTCHD3-202ENST00000622555 CERS3Q8IU89 383 aa21.28■■□□□ 1
PTCHD3-202ENST00000622555 SH3RF3Q8TEJ3 882 aaPredicted RBP21.28■■□□□ 1
PTCHD3-202ENST00000622555 SERPINA10Q9UK55 444 aa21.28■■□□□ 1
PTCHD3-202ENST00000622555 GJA3Q9Y6H8 435 aa21.28■■□□□ 1
PTCHD3-202ENST00000622555 GSG1L2A8MUP6 293 aa21.27■■□□□ 1
PTCHD3-202ENST00000622555 PLCG2P16885 1265 aa21.27■■□□□ 1
PTCHD3-202ENST00000622555 NECTIN1Q15223 517 aa21.27■■□□□ 1
PTCHD3-202ENST00000622555 C9orf131Q5VYM1 1079 aa21.27■■□□□ 1
PTCHD3-202ENST00000622555 HDAC9Q9UKV0 1011 aa21.27■■□□□ 1
PTCHD3-202ENST00000622555 BAZ2AQ9UIF9 1905 aaKnown RBP21.27■■□□□ 1
PTCHD3-202ENST00000622555 RPAP1Q9BWH6 1393 aaPredicted RBP21.27■■□□□ 1
PTCHD3-202ENST00000622555 OGFOD1Q8N543 542 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 SDR42E1Q8WUS8 393 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 ZDHHC15Q96MV8 337 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 NACAP1Q9BZK3 213 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 CTNNA3Q9UI47 895 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 PALD1Q9ULE6 856 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 ECM29Q5VYK3 1845 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 FGAP02671 866 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 USP17L8P0C7I0 530 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 RPS12P25398 132 aaKnown RBP21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 ANP32AP39687 249 aaKnown RBP21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 RNF20Q5VTR2 975 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 CREB3L3Q68CJ9 461 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 IFNL3Q8IZI9 196 aa21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 EPB41L4AQ9HCS5 686 aaPredicted RBP21.26■□□□□ 0.99
PTCHD3-202ENST00000622555 SLC27A2O14975 620 aa21.25■□□□□ 0.99
PTCHD3-202ENST00000622555 TDO2P48775 406 aa21.25■□□□□ 0.99
PTCHD3-202ENST00000622555 NAPBQ9H115 298 aa21.25■□□□□ 0.99
PTCHD3-202ENST00000622555 LAMA4Q16363 1823 aa21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 FOCADQ5VW36 1801 aa21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 GMPSP49915 693 aaPredicted RBP21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 ALX1Q15699 326 aa21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 CFAP100Q494V2 611 aa21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 APOBEC3HQ6NTF7 200 aaKnown RBP21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 TEX11Q8IYF3 940 aa21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 PCDHAC2Q9Y5I4 1007 aa21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 NAV1Q8NEY1 1877 aa21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 ZKSCAN1P17029 563 aaPredicted RBP21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 USP5P45974 858 aa21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 RHBDL3P58872 404 aa21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 DDRGK1Q96HY6 314 aa21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 IPO9Q96P70 1041 aaKnown RBP21.24■□□□□ 0.99
PTCHD3-202ENST00000622555 ZMYM6O95789 1325 aa21.23■□□□□ 0.99
PTCHD3-202ENST00000622555 ANAPC15P60006 121 aa21.23■□□□□ 0.99
PTCHD3-202ENST00000622555 RASEFQ8IZ41 740 aa21.23■□□□□ 0.99
PTCHD3-202ENST00000622555 ATP8A2Q9NTI2 1148 aa21.23■□□□□ 0.99
PTCHD3-202ENST00000622555 USP40Q9NVE5 1235 aa21.23■□□□□ 0.99
PTCHD3-202ENST00000622555 SNX14Q9Y5W7 946 aa21.23■□□□□ 0.99
PTCHD3-202ENST00000622555 CYP21A2P08686 494 aa21.22■□□□□ 0.99
PTCHD3-202ENST00000622555 IMMTQ16891 758 aaKnown RBP21.22■□□□□ 0.99
PTCHD3-202ENST00000622555 GIMAP6Q6P9H5 292 aa21.22■□□□□ 0.99
PTCHD3-202ENST00000622555 GPC2Q8N158 579 aa21.22■□□□□ 0.99
PTCHD3-202ENST00000622555 TGFBRAP1Q8WUH2 860 aa21.22■□□□□ 0.99
PTCHD3-202ENST00000622555 KCNB2Q92953 911 aa21.22■□□□□ 0.99
PTCHD3-202ENST00000622555 KIF2CQ99661 725 aa21.22■□□□□ 0.99
PTCHD3-202ENST00000622555 DLGAP5Q15398 846 aa21.21■□□□□ 0.99
PTCHD3-202ENST00000622555 CDC42EP5Q6NZY7 148 aa21.21■□□□□ 0.99
PTCHD3-202ENST00000622555 DPF2Q92785 391 aa21.21■□□□□ 0.99
PTCHD3-202ENST00000622555 DCP1AQ9NPI6 582 aaPredicted RBP21.21■□□□□ 0.99
PTCHD3-202ENST00000622555 MYH1P12882 1939 aa21.21■□□□□ 0.99
PTCHD3-202ENST00000622555 SHTN1A0MZ66 631 aa21.21■□□□□ 0.99
PTCHD3-202ENST00000622555 HAND2P61296 217 aa21.21■□□□□ 0.99
PTCHD3-202ENST00000622555 LAMB1P07942 1786 aa21.21■□□□□ 0.99
PTCHD3-202ENST00000622555 ZNF213O14771 459 aa21.2■□□□□ 0.98
PTCHD3-202ENST00000622555 MMP14P50281 582 aa21.2■□□□□ 0.98
PTCHD3-202ENST00000622555 MAPKAPK5Q8IW41 473 aa21.2■□□□□ 0.98
PTCHD3-202ENST00000622555 MICALL2Q8IY33 904 aa21.2■□□□□ 0.98
PTCHD3-202ENST00000622555 PRMT6Q96LA8 375 aaPredicted RBP21.2■□□□□ 0.98
PTCHD3-202ENST00000622555 TAF6LQ9Y6J9 622 aa21.2■□□□□ 0.98
PTCHD3-202ENST00000622555 SPDYE2BA6NHP3 402 aa21.19■□□□□ 0.98
PTCHD3-202ENST00000622555 SPDYE6P0CI01 402 aa21.19■□□□□ 0.98
PTCHD3-202ENST00000622555 ZNF280AP59817 542 aaPredicted RBP21.19■□□□□ 0.98
PTCHD3-202ENST00000622555 MYOZ2Q9NPC6 264 aa21.19■□□□□ 0.98
PTCHD3-202ENST00000622555 CNOT7Q9UIV1 285 aaKnown RBP21.19■□□□□ 0.98
PTCHD3-202ENST00000622555 UTRNP46939 3433 aa21.19■□□□□ 0.98
PTCHD3-202ENST00000622555 MTMR14Q8NCE2 650 aa21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 IL17RAQ96F46 866 aa21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 TDRD3Q9H7E2 651 aaKnown RBP21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 MCM9Q9NXL9 1143 aa21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 FLT1P17948 1338 aa21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 MINDY4BA8MYZ0 360 aa21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 WDHD1O75717 1129 aaPredicted RBP21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 PICALMQ13492 652 aa21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 TSGA10IPQ3SY00 556 aa21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 MKRN1Q9UHC7 482 aaKnown RBP21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 DDX60LQ5H9U9 1706 aaKnown RBP21.18■□□□□ 0.98
PTCHD3-202ENST00000622555 USP17L12C9JPN9 530 aa21.17■□□□□ 0.98
PTCHD3-202ENST00000622555 USP17L21D6R901 530 aa21.17■□□□□ 0.98
PTCHD3-202ENST00000622555 DDNO94850 711 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms