RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 ZNF513Q8N8E2 541 aaPredicted RBP13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 ZSCAN16Q9H4T2 348 aaPredicted RBP13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 TMPOP42166 694 aaKnown RBP13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 SLC9C2Q5TAH2 1124 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 NSMFQ6X4W1 530 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 STMN2Q93045 179 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 SWAP70Q9UH65 585 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 KRT2P35908 639 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 KIF11P52732 1056 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 YARSP54577 528 aaKnown RBP13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 SPAG1Q07617 926 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 CTAGE15A4D2H0 777 aa13.58□□□□□ -0.23
SLC6A6-210ENST00000622186 CTAGE8P0CG41 777 aa13.58□□□□□ -0.23
SLC6A6-210ENST00000622186 CD19P15391 556 aa13.58□□□□□ -0.23
SLC6A6-210ENST00000622186 UBASH3AP57075 661 aa13.58□□□□□ -0.23
SLC6A6-210ENST00000622186 PSMD2Q13200 908 aa13.58□□□□□ -0.23
SLC6A6-210ENST00000622186 CTAGE6Q86UF2 777 aa13.58□□□□□ -0.23
SLC6A6-210ENST00000622186 CTAGE4Q8IX94 777 aa13.58□□□□□ -0.23
SLC6A6-210ENST00000622186 TEX11Q8IYF3 940 aa13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 SUPT20HQ8NEM7 779 aa13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 BZW2Q9Y6E2 419 aaKnown RBP13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 MGEA5O60502 916 aa13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 GBP7Q8N8V2 638 aaPredicted RBP13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 SEC24BO95487 1268 aa13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 ZFYP08048 801 aaPredicted RBP13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 GLG1Q92896 1179 aa13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 TNFAIP3P21580 790 aa13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 BSPRYQ5W0U4 402 aa13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 SUDS3Q9H7L9 328 aaPredicted RBP13.58□□□□□ -0.24
SLC6A6-210ENST00000622186 IFT81Q8WYA0 676 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 PNMA2Q9UL42 364 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 USTQ9Y2C2 406 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 PLEKHH1Q9ULM0 1364 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 CEP85LQ5SZL2 805 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 CAPZA3Q96KX2 299 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 CCDC42Q96M95 316 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 UIMC1Q96RL1 719 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 NKIRAS1Q9NYS0 192 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 ARHGEF35A5YM69 484 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 RPS6KA2Q15349 733 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 NBPF1Q3BBV0 1214 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 NUCKS1Q9H1E3 243 aaKnown RBP13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 SLITRK6Q9H5Y7 841 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 TYW5A2RUC4 315 aaKnown RBP13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 MAGEB6Q8N7X4 407 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 CCDC94Q9BW85 323 aaPredicted RBP13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 CETN3O15182 167 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 SND1Q7KZF4 910 aaKnown RBP eCLIP13.57□□□□□ -0.241e-7■■■□□ 15.7
SLC6A6-210ENST00000622186 MORC4Q8TE76 937 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 TRPC6Q9Y210 931 aa13.57□□□□□ -0.24
SLC6A6-210ENST00000622186 MNAT1P51948 309 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 GKAP1Q5VSY0 366 aaPredicted RBP13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 USP48Q86UV5 1035 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 PPFIBP2Q8ND30 876 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 RTEL1Q9NZ71 1219 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 P4HA1P13674 534 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 DCUN1D2Q6PH85 259 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 ELMSAN1Q6PJG2 1045 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 CCDC170Q8IYT3 715 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 CCNL1Q9UK58 526 aaPredicted RBP13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 CAPN9O14815 690 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 UBXN1Q04323 297 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 FYB2Q5VWT5 728 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 CCDC121Q6ZUS5 278 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 INTS8Q75QN2 995 aaKnown RBP13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 OLA1Q9NTK5 396 aaKnown RBP13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 KRT83P78385 493 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 DPP8Q6V1X1 898 aaPredicted RBP13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 TAOK1Q7L7X3 1001 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 SLC17A8Q8NDX2 589 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 TRIM56Q9BRZ2 755 aaKnown RBP13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 MLXIPQ9HAP2 919 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 HMG20BQ9P0W2 317 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 TCP10Q12799 353 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 KIAA1841Q6NSI8 718 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 LRRC2Q9BYS8 371 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 GNAT2P19087 354 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 HELBQ8NG08 1087 aaPredicted RBP13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 SAMD15Q9P1V8 674 aa13.56□□□□□ -0.24
SLC6A6-210ENST00000622186 PFDN6O15212 129 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 TMEM259Q4ZIN3 620 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 CCDC24Q8N4L8 307 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 POMGNT1Q8WZA1 660 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 TRIM75PA6NK02 468 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 SSFA2P28290 1259 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 INPP1P49441 399 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 CPLX4Q7Z7G2 160 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 UBLCP1Q8WVY7 318 aaPredicted RBP13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 BNIP3LO60238 219 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 NEDD9Q14511 834 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 BRF1Q92994 677 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 FOXD4Q12950 439 aaPredicted RBP13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 DTHD1Q6ZMT9 781 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 SULF1Q8IWU6 871 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 VCX3BQ9H321 246 aa13.55□□□□□ -0.24
SLC6A6-210ENST00000622186 PRG4Q92954 1404 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms