RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 FHOD1Q9Y613 1164 aa18.18■□□□□ 0.5
NPHP4-211ENST00000622020 VGLL3A8MV65 326 aa18.17■□□□□ 0.5
NPHP4-211ENST00000622020 MYL5Q02045 173 aa18.17■□□□□ 0.5
NPHP4-211ENST00000622020 CCDC93Q567U6 631 aa18.17■□□□□ 0.5
NPHP4-211ENST00000622020 BMS1Q14692 1282 aaKnown RBP18.17■□□□□ 0.5
NPHP4-211ENST00000622020 ZKSCAN3Q9BRR0 538 aa18.17■□□□□ 0.5
NPHP4-211ENST00000622020 OVOS2A0A0G2JMS6 1433 aa18.17■□□□□ 0.5
NPHP4-211ENST00000622020 PNMA6AP0CW24 399 aaPredicted RBP18.17■□□□□ 0.5
NPHP4-211ENST00000622020 H2AFXP16104 143 aaPredicted RBP18.17■□□□□ 0.5
NPHP4-211ENST00000622020 GNG11P61952 73 aa18.17■□□□□ 0.5
NPHP4-211ENST00000622020 RRP12Q5JTH9 1297 aaKnown RBP18.17■□□□□ 0.5
NPHP4-211ENST00000622020 OLFM4Q6UX06 510 aa18.17■□□□□ 0.5
NPHP4-211ENST00000622020 METTL16Q86W50 562 aaKnown RBP18.17■□□□□ 0.5
NPHP4-211ENST00000622020 CCDC34Q96HJ3 373 aa18.17■□□□□ 0.5
NPHP4-211ENST00000622020 NBPF3Q9H094 633 aa18.17■□□□□ 0.5
NPHP4-211ENST00000622020 KARSQ15046 597 aaKnown RBP18.16■□□□□ 0.5
NPHP4-211ENST00000622020 TRIM65Q6PJ69 517 aa18.16■□□□□ 0.5
NPHP4-211ENST00000622020 APPBP2Q92624 585 aa18.16■□□□□ 0.5
NPHP4-211ENST00000622020 SLC26A6Q9BXS9 759 aa18.16■□□□□ 0.5
NPHP4-211ENST00000622020 KCNJ14Q9UNX9 436 aa18.16■□□□□ 0.5
NPHP4-211ENST00000622020 AFDNP55196 1824 aaKnown RBP18.16■□□□□ 0.5
NPHP4-211ENST00000622020 TEX35Q5T0J7 233 aa18.16■□□□□ 0.5
NPHP4-211ENST00000622020 HELBQ8NG08 1087 aaPredicted RBP18.16■□□□□ 0.5
NPHP4-211ENST00000622020 WDR24Q96S15 920 aa18.16■□□□□ 0.5
NPHP4-211ENST00000622020 BPIFA3Q9BQP9 254 aa18.16■□□□□ 0.5
NPHP4-211ENST00000622020 IRX2Q9BZI1 471 aaPredicted RBP18.16■□□□□ 0.5
NPHP4-211ENST00000622020 SNAP23O00161 211 aa18.15■□□□□ 0.5
NPHP4-211ENST00000622020 BMP6P22004 513 aa18.15■□□□□ 0.5
NPHP4-211ENST00000622020 MCAMP43121 646 aa18.15■□□□□ 0.5
NPHP4-211ENST00000622020 METTL24Q5JXM2 366 aa18.15■□□□□ 0.5
NPHP4-211ENST00000622020 TMCO3Q6UWJ1 677 aa18.15■□□□□ 0.5
NPHP4-211ENST00000622020 EVCP57679 992 aa18.15■□□□□ 0.5
NPHP4-211ENST00000622020 CPLX3Q8WVH0 158 aa18.15■□□□□ 0.5
NPHP4-211ENST00000622020 KCNH3Q9ULD8 1083 aa18.15■□□□□ 0.5
NPHP4-211ENST00000622020 ANGEL1Q9UNK9 670 aaKnown RBP18.15■□□□□ 0.5
NPHP4-211ENST00000622020 PLA2G4AP47712 749 aa18.15■□□□□ 0.5
NPHP4-211ENST00000622020 GPR108Q9NPR9 543 aa18.15■□□□□ 0.5
NPHP4-211ENST00000622020 BTBD18B2RXH4 712 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 GUCY1A2P33402 732 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 CTDSPL2Q05D32 466 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 TOGARAM2Q6ZUX3 1019 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 REXO1L1PQ8IX06 675 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 INTS13Q9NVM9 706 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 TMEM51Q9NW97 253 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 COBLO75128 1261 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 IARSP41252 1262 aaKnown RBP18.14■□□□□ 0.49
NPHP4-211ENST00000622020 GYS2P54840 703 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 TRIM29Q14134 588 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 CCDC102BQ68D86 513 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 LDHAL6AQ6ZMR3 332 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 CCDC191Q8NCU4 936 aa18.14■□□□□ 0.49
NPHP4-211ENST00000622020 PRR29P0C7W0 189 aa18.13■□□□□ 0.49
NPHP4-211ENST00000622020 IFIT5Q13325 482 aaKnown RBP18.13■□□□□ 0.49
NPHP4-211ENST00000622020 APOA5Q6Q788 366 aa18.13■□□□□ 0.49
NPHP4-211ENST00000622020 PPP2R2CQ9Y2T4 447 aa18.13■□□□□ 0.49
NPHP4-211ENST00000622020 RANBP6O60518 1105 aaKnown RBP18.13■□□□□ 0.49
NPHP4-211ENST00000622020 MTF1Q14872 753 aa18.13■□□□□ 0.49
NPHP4-211ENST00000622020 PTPAQ15257 358 aa18.13■□□□□ 0.49
NPHP4-211ENST00000622020 KLHL10Q6JEL2 608 aa18.13■□□□□ 0.49
NPHP4-211ENST00000622020 VSTM4Q8IW00 320 aa18.13■□□□□ 0.49
NPHP4-211ENST00000622020 VWA3AA6NCI4 1184 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 GOLGA8AA7E2F4 631 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 IKBKBO14920 756 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 POLR2DO15514 142 aaKnown RBP18.12■□□□□ 0.49
NPHP4-211ENST00000622020 FMR1Q06787 632 aaKnown RBP eCLIP18.12■□□□□ 0.492e-17■■■■■ 60.8
NPHP4-211ENST00000622020 PARP3Q9Y6F1 533 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 ZBTB43O43298 467 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 CASP1P29466 404 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 TMEM67Q5HYA8 995 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 CREBRFQ8IUR6 639 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 NEK11Q8NG66 645 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 CHMP4CQ96CF2 233 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 CNNM1Q9NRU3 951 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 TUBE1Q9UJT0 475 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 NFE2L3Q9Y4A8 694 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 A0A0U1RQJ8 604 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 LRRFIP1Q32MZ4 808 aaKnown RBP18.12■□□□□ 0.49
NPHP4-211ENST00000622020 KRBA2Q6ZNG9 492 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 ATRIPQ8WXE1 791 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 BAG1Q99933 345 aaPredicted RBP18.12■□□□□ 0.49
NPHP4-211ENST00000622020 PIH1D3Q9NQM4 214 aaKnown RBP18.12■□□□□ 0.49
NPHP4-211ENST00000622020 KCND1Q9NSA2 647 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 SAMSN1Q9NSI8 373 aaKnown RBP18.12■□□□□ 0.49
NPHP4-211ENST00000622020 FAM53CQ9NYF3 392 aa18.12■□□□□ 0.49
NPHP4-211ENST00000622020 MYH15Q9Y2K3 1946 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 STX17P56962 302 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 TOM1L2Q6ZVM7 507 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 USP49Q70CQ1 688 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 LZTFL1Q9NQ48 299 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 WWC3Q9ULE0 1092 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 AKAP2Q9Y2D5 859 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 USP54Q70EL1 1684 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 CBFA2T2O43439 604 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 ZFYP08048 801 aaPredicted RBP18.11■□□□□ 0.49
NPHP4-211ENST00000622020 CPLX2Q6PUV4 134 aaKnown RBP18.11■□□□□ 0.49
NPHP4-211ENST00000622020 MAP3K14Q99558 947 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 SERTAD1Q9UHV2 236 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 HPSEQ9Y251 543 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 ZMYM6O95789 1325 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms