RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 KIF16BQ96L93 1317 aa14.31□□□□□ -0.12
CPNE3-210ENST00000621245 RBBP6Q7Z6E9 1792 aaKnown RBP14.31□□□□□ -0.12
CPNE3-210ENST00000621245 CCER2I3L3R5 266 aa14.3□□□□□ -0.12
CPNE3-210ENST00000621245 FKTNO75072 461 aa14.3□□□□□ -0.12
CPNE3-210ENST00000621245 IFIT1P09914 478 aaKnown RBP14.3□□□□□ -0.12
CPNE3-210ENST00000621245 SLC5A1P13866 664 aa14.3□□□□□ -0.12
CPNE3-210ENST00000621245 IREB2P48200 963 aaKnown RBP14.3□□□□□ -0.12
CPNE3-210ENST00000621245 CRHR2Q13324 411 aa14.3□□□□□ -0.12
CPNE3-210ENST00000621245 NBR1Q14596 966 aa14.3□□□□□ -0.12
CPNE3-210ENST00000621245 DIXDC1Q155Q3 683 aa14.3□□□□□ -0.12
CPNE3-210ENST00000621245 ANKRD13AQ8IZ07 590 aa14.3□□□□□ -0.12
CPNE3-210ENST00000621245 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.3□□□□□ -0.12
CPNE3-210ENST00000621245 TEKT1Q969V4 418 aa14.3□□□□□ -0.12
CPNE3-210ENST00000621245 ZDHHC15Q96MV8 337 aa14.3□□□□□ -0.12
CPNE3-210ENST00000621245 PTPRFP10586 1907 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 PRDX5P30044 214 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 PHKA1P46020 1223 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 TNFAIP1Q13829 316 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 ATP2B3Q16720 1220 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 NOM1Q5C9Z4 860 aaKnown RBP14.29□□□□□ -0.12
CPNE3-210ENST00000621245 TBC1D22AQ8WUA7 517 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 BRI3BPQ8WY22 251 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 LPIN2Q92539 896 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 MS4A4AQ96JQ5 239 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 SNCAIPQ9Y6H5 919 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 PHIPQ8WWQ0 1821 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 CDK5RAP2Q96SN8 1893 aa14.29□□□□□ -0.12
CPNE3-210ENST00000621245 TESPA1A2RU30 521 aaPredicted RBP14.28□□□□□ -0.12
CPNE3-210ENST00000621245 CIAO1O76071 339 aa14.28□□□□□ -0.12
CPNE3-210ENST00000621245 HDLBPQ00341 1268 aaKnown RBP14.28□□□□□ -0.12
CPNE3-210ENST00000621245 NFIAQ12857 509 aa14.28□□□□□ -0.12
CPNE3-210ENST00000621245 DAGLAQ9Y4D2 1042 aa14.28□□□□□ -0.12
CPNE3-210ENST00000621245 BCAR3O75815 825 aa14.27□□□□□ -0.13
CPNE3-210ENST00000621245 CT47B1P0C2W7 299 aaPredicted RBP14.27□□□□□ -0.13
CPNE3-210ENST00000621245 CD99L2Q8TCZ2 262 aa14.27□□□□□ -0.13
CPNE3-210ENST00000621245 ZKSCAN4Q969J2 545 aaPredicted RBP14.27□□□□□ -0.13
CPNE3-210ENST00000621245 OTUD5Q96G74 571 aa14.27□□□□□ -0.13
CPNE3-210ENST00000621245 API5Q9BZZ5 524 aaKnown RBP14.27□□□□□ -0.13
CPNE3-210ENST00000621245 DOCK1Q14185 1865 aa14.27□□□□□ -0.13
CPNE3-210ENST00000621245 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.13
CPNE3-210ENST00000621245 KIAA0100Q14667 2235 aaKnown RBP14.26□□□□□ -0.13
CPNE3-210ENST00000621245 RPAP1Q9BWH6 1393 aaPredicted RBP14.26□□□□□ -0.13
CPNE3-210ENST00000621245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
CPNE3-210ENST00000621245 SLURP2P0DP57 97 aa14.26□□□□□ -0.13
CPNE3-210ENST00000621245 TNNI2P48788 182 aa14.26□□□□□ -0.13
CPNE3-210ENST00000621245 MAP3K9P80192 1104 aa14.26□□□□□ -0.13
CPNE3-210ENST00000621245 CDC42EP5Q6NZY7 148 aa14.26□□□□□ -0.13
CPNE3-210ENST00000621245 FBXO46Q6PJ61 603 aaPredicted RBP14.26□□□□□ -0.13
CPNE3-210ENST00000621245 OTOP1Q7RTM1 612 aa14.26□□□□□ -0.13
CPNE3-210ENST00000621245 ZFPM1Q8IX07 1006 aa14.26□□□□□ -0.13
CPNE3-210ENST00000621245 FAM43AQ8N2R8 423 aa14.26□□□□□ -0.13
CPNE3-210ENST00000621245 ZFP91Q96JP5 570 aaPredicted RBP14.26□□□□□ -0.13
CPNE3-210ENST00000621245 TRIM17Q9Y577 477 aa14.26□□□□□ -0.13
CPNE3-210ENST00000621245 RFX7Q2KHR2 1363 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 SIPA1L1O43166 1804 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 MAST2Q6P0Q8 1798 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 CCL15-CCL14A0A0B4J2E2 113 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 UNCXA6NJT0 531 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 ALDH1A1P00352 501 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 TRIM27P14373 513 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 TCP10Q12799 353 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 CCL15Q16663 113 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 INTS3Q68E01 1043 aaKnown RBP14.25□□□□□ -0.13
CPNE3-210ENST00000621245 HHIPL2Q6UWX4 724 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 MIGA2Q7L4E1 593 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 FAM83AQ86UY5 434 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 WDR66Q8TBY9 1149 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 WRNIP1Q96S55 665 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 COPRSQ9NQ92 184 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 CEP126Q9P2H0 1117 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 FAM198AQ9UFP1 575 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 MGAMO43451 1857 aa14.25□□□□□ -0.13
CPNE3-210ENST00000621245 ATRNL1Q5VV63 1379 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 MAST3O60307 1309 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 SPDYE5A6NIY4 337 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 PYGBP11216 843 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 INPP5BP32019 993 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 IL15P40933 162 aaPredicted RBP14.24□□□□□ -0.13
CPNE3-210ENST00000621245 INHBEP58166 350 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 TIMM10P62072 90 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 TFCP2Q12800 502 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 RASGRF1Q13972 1273 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 PKN2Q16513 984 aaKnown RBP14.24□□□□□ -0.13
CPNE3-210ENST00000621245 CCDC102BQ68D86 513 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 MRIQ9BWK5 157 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 SUGT1Q9Y2Z0 365 aa14.24□□□□□ -0.13
CPNE3-210ENST00000621245 SRGAP3O43295 1099 aa14.23□□□□□ -0.13
CPNE3-210ENST00000621245 FKBP1CQ5VVH2 108 aa14.23□□□□□ -0.13
CPNE3-210ENST00000621245 PI16Q6UXB8 463 aa14.23□□□□□ -0.13
CPNE3-210ENST00000621245 ZNF384Q8TF68 577 aa14.23□□□□□ -0.13
CPNE3-210ENST00000621245 TMOD2Q9NZR1 351 aa14.23□□□□□ -0.13
CPNE3-210ENST00000621245 CSADQ9Y600 493 aa14.23□□□□□ -0.13
CPNE3-210ENST00000621245 STK24Q9Y6E0 443 aa14.23□□□□□ -0.13
CPNE3-210ENST00000621245 FOCADQ5VW36 1801 aa14.22□□□□□ -0.13
CPNE3-210ENST00000621245 SALL1Q9NSC2 1324 aa14.22□□□□□ -0.13
CPNE3-210ENST00000621245 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
CPNE3-210ENST00000621245 IRF6O14896 467 aa14.22□□□□□ -0.13
CPNE3-210ENST00000621245 LDHBP07195 334 aaKnown RBP14.22□□□□□ -0.13
CPNE3-210ENST00000621245 SH3BP5LQ7L8J4 393 aa14.22□□□□□ -0.13
CPNE3-210ENST00000621245 FAM151AQ8WW52 585 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms