RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
CDH1-214ENST00000621016 ZNF513Q8N8E2 541 aaPredicted RBP12.33□□□□□ -0.44
CDH1-214ENST00000621016 MPHOSPH10O00566 681 aaKnown RBP12.32□□□□□ -0.44
CDH1-214ENST00000621016 ITGA6P23229 1130 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 EXOSC10Q01780 885 aaKnown RBP12.32□□□□□ -0.44
CDH1-214ENST00000621016 GOLGA8FQ08AF8 430 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 GOLGA8DPQ0D2H9 430 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 TEX35Q5T0J7 233 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 FAM160A1Q05DH4 1040 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 ARMC3Q5W041 872 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 CEP57L1Q8IYX8 460 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 CARMIL3Q8ND23 1372 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 DSCC1Q9BVC3 393 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 ARID4AP29374 1257 aaPredicted RBP12.32□□□□□ -0.44
CDH1-214ENST00000621016 SNW1Q13573 536 aaKnown RBP12.32□□□□□ -0.44
CDH1-214ENST00000621016 ERCC6LQ2NKX8 1250 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 TMC6Q7Z403 805 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 MRPS27Q92552 414 aaKnown RBP12.32□□□□□ -0.44
CDH1-214ENST00000621016 CLIC6Q96NY7 704 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 RCOR1Q9UKL0 485 aa12.32□□□□□ -0.44
CDH1-214ENST00000621016 KIF28PB7ZC32 967 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 FOXR1Q6PIV2 292 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 ANKRD20A12PQ8NF67 263 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 IFNKQ9P0W0 207 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 SPTLC2O15270 562 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 IL2RBP14784 551 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 RBM5P52756 815 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDH1-214ENST00000621016 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 SLC4A8Q2Y0W8 1093 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 PDILTQ8N807 584 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 TDRD7Q8NHU6 1098 aaKnown RBP12.31□□□□□ -0.44
CDH1-214ENST00000621016 ANO10Q9NW15 660 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 SH3TC1Q8TE82 1336 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 hCG_1642624A0A1W2PR95 340 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 SEC31AO94979 1220 aaKnown RBP12.31□□□□□ -0.44
CDH1-214ENST00000621016 MCAMP43121 646 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 MNAT1P51948 309 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 MIGA1Q8NAN2 632 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 NCOA7Q8NI08 942 aa12.31□□□□□ -0.44
CDH1-214ENST00000621016 SMTNL1A8MU46 457 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 TPM3P06753 285 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 SLC3A2P08195 630 aaKnown RBP12.3□□□□□ -0.44
CDH1-214ENST00000621016 PHKA1P46020 1223 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 TCIRG1Q13488 830 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 IQCB1Q15051 598 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 NAA16Q6N069 864 aaPredicted RBP12.3□□□□□ -0.44
CDH1-214ENST00000621016 SRLQ86TD4 932 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 PLA2G4DQ86XP0 818 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 CREBRFQ8IUR6 639 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 LRRC8AQ8IWT6 810 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 NUP133Q8WUM0 1156 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 ALG1Q9BT22 464 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
CDH1-214ENST00000621016 CEP135Q66GS9 1140 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 CCDC91Q7Z6B0 441 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDH1-214ENST00000621016 TUBGCP6Q96RT7 1819 aa12.3□□□□□ -0.44
CDH1-214ENST00000621016 AIDAQ96BJ3 306 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 LLPHQ9BRT6 129 aaKnown RBP12.29□□□□□ -0.44
CDH1-214ENST00000621016 ZNF202O95125 648 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 ATP1A3P13637 1013 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 METAP2P50579 478 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDH1-214ENST00000621016 PTPN14Q15678 1187 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 HOMER1Q86YM7 354 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 XPO4Q9C0E2 1151 aaKnown RBP12.29□□□□□ -0.44
CDH1-214ENST00000621016 BRMS1Q9HCU9 246 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 WWC3Q9ULE0 1092 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 AKAP2Q9Y2D5 859 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 IRS4O14654 1257 aaPredicted RBP12.29□□□□□ -0.44
CDH1-214ENST00000621016 ANTXR2P58335 489 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 DHX40Q8IX18 779 aaKnown RBP12.29□□□□□ -0.44
CDH1-214ENST00000621016 PIGBQ92521 554 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 SLC26A6Q9BXS9 759 aa12.29□□□□□ -0.44
CDH1-214ENST00000621016 ZNF532Q9HCE3 1301 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 CCDC189A1A4V9 331 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 FOXP2O15409 715 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 MYSM1Q5VVJ2 828 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 NAIF1Q69YI7 327 aaPredicted RBP12.28□□□□□ -0.44
CDH1-214ENST00000621016 CYB5R4Q7L1T6 521 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 TBC1D10CQ8IV04 446 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 LINC00301Q8NCQ3 95 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 LRRN4CLQ8ND94 238 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 FBXO18Q8NFZ0 1043 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 EPC1Q9H2F5 836 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 PIH1D3Q9NQM4 214 aaKnown RBP12.28□□□□□ -0.44
CDH1-214ENST00000621016 ABCF2Q9UG63 623 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 MED1Q15648 1581 aaPredicted RBP12.28□□□□□ -0.44
CDH1-214ENST00000621016 PRKAB2O43741 272 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 PNOCQ13519 176 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 TXLNBQ8N3L3 684 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 APPBP2Q92624 585 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 NAT10Q9H0A0 1025 aaKnown RBP12.28□□□□□ -0.44
CDH1-214ENST00000621016 ALDH8A1Q9H2A2 487 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms