RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
NEDD9-216ENST00000620854 BABAM1Q9NWV8 329 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 TADA3O75528 432 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 TBC1D8O95759 1140 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 ANO1Q5XXA6 986 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 MICU3Q86XE3 530 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 GRAMD1CQ8IYS0 662 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 KBTBD3Q8NAB2 608 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 CNNM3Q8NE01 707 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 KCNG4Q8TDN1 519 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 CCDC47Q96A33 483 aaKnown RBP7.97□□□□□ -1.13
NEDD9-216ENST00000620854 DHX58Q96C10 678 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 LLPHQ9BRT6 129 aaKnown RBP7.97□□□□□ -1.13
NEDD9-216ENST00000620854 RTEL1Q9NZ71 1219 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 FEZ2Q9UHY8 353 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-216ENST00000620854 TRMT112Q9UI30 125 aaKnown RBP7.97□□□□□ -1.13
NEDD9-216ENST00000620854 PARP3Q9Y6F1 533 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 PRC1O43663 620 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 HMGB1P09429 215 aaKnown RBP7.97□□□□□ -1.13
NEDD9-216ENST00000620854 STX17P56962 302 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 PI16Q6UXB8 463 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 NUP133Q8WUM0 1156 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 RUFY1Q96T51 708 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 BAG1Q99933 345 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-216ENST00000620854 ADAM21Q9UKJ8 722 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 NRKQ7Z2Y5 1582 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 LRRC24Q50LG9 513 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 CC2D1AQ6P1N0 951 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-216ENST00000620854 ZNF790Q6PG37 636 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 REXO1L1PQ8IX06 675 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 FBXO18Q8NFZ0 1043 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 GDAP1L1Q96MZ0 367 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 FAM53CQ9NYF3 392 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 TBC1D2BQ9UPU7 963 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 PCDHA5Q9Y5H7 936 aa7.97□□□□□ -1.13
NEDD9-216ENST00000620854 ZRANB2O95218 330 aaKnown RBP eCLIP7.96□□□□□ -1.13
NEDD9-216ENST00000620854 CDC27P30260 824 aa7.96□□□□□ -1.13
NEDD9-216ENST00000620854 MYL5Q02045 173 aa7.96□□□□□ -1.13
NEDD9-216ENST00000620854 LONRF3Q496Y0 759 aa7.96□□□□□ -1.13
NEDD9-216ENST00000620854 CCDC102AQ96A19 550 aa7.96□□□□□ -1.13
NEDD9-216ENST00000620854 INCENPQ9NQS7 918 aa7.96□□□□□ -1.13
NEDD9-216ENST00000620854 VWA3AA6NCI4 1184 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 ZSCAN12O43309 604 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 N4BP1O75113 896 aaKnown RBP7.96□□□□□ -1.14
NEDD9-216ENST00000620854 ATP6V1AP38606 617 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 TTC39AQ5SRH9 613 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 OSBP2Q969R2 916 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 ZNF496Q96IT1 587 aaPredicted RBP7.96□□□□□ -1.14
NEDD9-216ENST00000620854 HAUS7Q99871 368 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 PDE11AQ9HCR9 933 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 CWC25Q9NXE8 425 aaPredicted RBP7.96□□□□□ -1.14
NEDD9-216ENST00000620854 MROH7-TTC4A0A0A0MT08 1334 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 EFCAB8A8MWE9 144 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 M0R2C6 588 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 IGHMBP2P38935 993 aaKnown RBP7.96□□□□□ -1.14
NEDD9-216ENST00000620854 EXOSC10Q01780 885 aaKnown RBP7.96□□□□□ -1.14
NEDD9-216ENST00000620854 PDE4BQ07343 736 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 AXDND1Q5T1B0 1012 aaPredicted RBP7.96□□□□□ -1.14
NEDD9-216ENST00000620854 FOXP4Q8IVH2 680 aaPredicted RBP7.96□□□□□ -1.14
NEDD9-216ENST00000620854 AMOTL1Q8IY63 956 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 PUS3Q9BZE2 481 aaKnown RBP7.96□□□□□ -1.14
NEDD9-216ENST00000620854 ALDH8A1Q9H2A2 487 aaPredicted RBP7.96□□□□□ -1.14
NEDD9-216ENST00000620854 RABEP2Q9H5N1 569 aa7.96□□□□□ -1.14
NEDD9-216ENST00000620854 HOXB7P09629 217 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 SART3Q15020 963 aaKnown RBP7.95□□□□□ -1.14
NEDD9-216ENST00000620854 CMTR1Q8N1G2 835 aaKnown RBP7.95□□□□□ -1.14
NEDD9-216ENST00000620854 AK7Q96M32 723 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 ALG1Q9BT22 464 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 NFE2L3Q9Y4A8 694 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 H3BQF6 201 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 FGAP02671 866 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 IFIT5Q13325 482 aaKnown RBP7.95□□□□□ -1.14
NEDD9-216ENST00000620854 PDIA6Q15084 440 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 LONRF2Q1L5Z9 754 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 TXLNBQ8N3L3 684 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 HSD3B7Q9H2F3 369 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 SLC52A2Q9HAB3 445 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 MAST3O60307 1309 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 TUBGCP6Q96RT7 1819 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 SOWAHDA6NJG2 315 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 CASP1P29466 404 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 SETQ01105 290 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-216ENST00000620854 KIF4BQ2VIQ3 1234 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 FOXR1Q6PIV2 292 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 JMYQ8N9B5 988 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 SAMSN1Q9NSI8 373 aaKnown RBP7.95□□□□□ -1.14
NEDD9-216ENST00000620854 XRN1Q8IZH2 1706 aaKnown RBP7.95□□□□□ -1.14
NEDD9-216ENST00000620854 SPATA31A3Q5VYP0 1347 aa7.95□□□□□ -1.14
NEDD9-216ENST00000620854 MYO1CO00159 1063 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 IDH1O75874 414 aaKnown RBP7.94□□□□□ -1.14
NEDD9-216ENST00000620854 XBP1P17861 261 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 FAM98CQ17RN3 349 aaKnown RBP7.94□□□□□ -1.14
NEDD9-216ENST00000620854 FILIP1LQ4L180 1135 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 METTL24Q5JXM2 366 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 CCDC102BQ68D86 513 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 SHC4Q6S5L8 630 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 STAMQ92783 540 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 METTL22Q9BUU2 404 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-216ENST00000620854 SENP2Q9HC62 589 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 GNL3LQ9NVN8 582 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms