RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 OSBP2Q969R2 916 aa16.5■□□□□ 0.23
NEK3-210ENST00000620675 FAM163AQ96GL9 167 aaPredicted RBP16.5■□□□□ 0.23
NEK3-210ENST00000620675 FAM227BQ96M60 508 aa16.5■□□□□ 0.23
NEK3-210ENST00000620675 RNF113AO15541 343 aaKnown RBP16.49■□□□□ 0.23
NEK3-210ENST00000620675 CDC42EP5Q6NZY7 148 aa16.49■□□□□ 0.23
NEK3-210ENST00000620675 MRIQ9BWK5 157 aa16.49■□□□□ 0.23
NEK3-210ENST00000620675 IL25Q9H293 177 aa16.49■□□□□ 0.23
NEK3-210ENST00000620675 MYH1P12882 1939 aa16.49■□□□□ 0.23
NEK3-210ENST00000620675 GPR75-ASB3A0A0A6YYF3 556 aa16.49■□□□□ 0.23
NEK3-210ENST00000620675 A0A0D9SFI3 127 aa16.49■□□□□ 0.23
NEK3-210ENST00000620675 M0R2C6 588 aa16.49■□□□□ 0.23
NEK3-210ENST00000620675 RHBDL3P58872 404 aa16.49■□□□□ 0.23
NEK3-210ENST00000620675 GGA3Q9NZ52 723 aa16.49■□□□□ 0.23
NEK3-210ENST00000620675 NFIAQ12857 509 aa16.48■□□□□ 0.23
NEK3-210ENST00000620675 ANGEL2Q5VTE6 544 aaKnown RBP16.48■□□□□ 0.23
NEK3-210ENST00000620675 CCDC129Q6ZRS4 1044 aa16.48■□□□□ 0.23
NEK3-210ENST00000620675 USP50Q70EL3 339 aaPredicted RBP16.48■□□□□ 0.23
NEK3-210ENST00000620675 SH3RF3Q8TEJ3 882 aaPredicted RBP16.48■□□□□ 0.23
NEK3-210ENST00000620675 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.48■□□□□ 0.23
NEK3-210ENST00000620675 GSTO1P78417 241 aa16.47■□□□□ 0.23
NEK3-210ENST00000620675 NMIQ13287 307 aaPredicted RBP16.47■□□□□ 0.23
NEK3-210ENST00000620675 UBE3CQ15386 1083 aa16.47■□□□□ 0.23
NEK3-210ENST00000620675 BMP2KLQ5H9B9 411 aa16.47■□□□□ 0.23
NEK3-210ENST00000620675 LCORLQ8N3X6 602 aa16.47■□□□□ 0.23
NEK3-210ENST00000620675 RIOK1Q9BRS2 568 aaKnown RBP16.47■□□□□ 0.23
NEK3-210ENST00000620675 ZNF70Q9UC06 446 aaPredicted RBP16.47■□□□□ 0.23
NEK3-210ENST00000620675 FMR1Q06787 632 aaKnown RBP eCLIP16.47■□□□□ 0.23
NEK3-210ENST00000620675 ZMYM1Q5SVZ6 1142 aa16.47■□□□□ 0.23
NEK3-210ENST00000620675 MAP1SQ66K74 1059 aaPredicted RBP16.47■□□□□ 0.23
NEK3-210ENST00000620675 ARMT1Q9H993 441 aa16.47■□□□□ 0.23
NEK3-210ENST00000620675 VEZTQ9HBM0 779 aa16.47■□□□□ 0.23
NEK3-210ENST00000620675 USP40Q9NVE5 1235 aa16.47■□□□□ 0.23
NEK3-210ENST00000620675 MBD4O95243 580 aa16.46■□□□□ 0.23
NEK3-210ENST00000620675 LDHCP07864 332 aa16.46■□□□□ 0.23
NEK3-210ENST00000620675 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
NEK3-210ENST00000620675 CDAN1Q8IWY9 1227 aa16.46■□□□□ 0.23
NEK3-210ENST00000620675 DDX4Q9NQI0 724 aaKnown RBP16.46■□□□□ 0.23
NEK3-210ENST00000620675 CLEC11AQ9Y240 323 aa16.46■□□□□ 0.23
NEK3-210ENST00000620675 TCP10L2B9ZVM9 353 aa16.46■□□□□ 0.22
NEK3-210ENST00000620675 PRKAB2O43741 272 aa16.46■□□□□ 0.22
NEK3-210ENST00000620675 WDHD1O75717 1129 aaPredicted RBP16.46■□□□□ 0.22
NEK3-210ENST00000620675 ZFPM1Q8IX07 1006 aa16.46■□□□□ 0.22
NEK3-210ENST00000620675 APPBP2Q92624 585 aa16.46■□□□□ 0.22
NEK3-210ENST00000620675 NAV1Q8NEY1 1877 aa16.45■□□□□ 0.22
NEK3-210ENST00000620675 MAGEB6P1A0A0J9YX57 407 aa16.45■□□□□ 0.22
NEK3-210ENST00000620675 PPP4CP60510 307 aa16.45■□□□□ 0.22
NEK3-210ENST00000620675 PRAMEF18Q5VWM3 479 aa16.45■□□□□ 0.22
NEK3-210ENST00000620675 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
NEK3-210ENST00000620675 ZNF589Q86UQ0 364 aaPredicted RBP16.45■□□□□ 0.22
NEK3-210ENST00000620675 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
NEK3-210ENST00000620675 SLF2Q8IX21 1173 aa16.45■□□□□ 0.22
NEK3-210ENST00000620675 RFX7Q2KHR2 1363 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 ADM5C9JUS6 153 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 CHMLP26374 656 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 ZSCAN25Q6NSZ9 544 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 FAM198AQ9UFP1 575 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 SIPA1L1O43166 1804 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 ZFYP08048 801 aaPredicted RBP16.44■□□□□ 0.22
NEK3-210ENST00000620675 MMP14P50281 582 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 TCP10Q12799 353 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 SDR42E1Q8WUS8 393 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 GLIS2Q9BZE0 524 aaPredicted RBP16.44■□□□□ 0.22
NEK3-210ENST00000620675 PGAP2Q9UHJ9 254 aa16.44■□□□□ 0.22
NEK3-210ENST00000620675 DDX60LQ5H9U9 1706 aaKnown RBP16.44■□□□□ 0.22
NEK3-210ENST00000620675 SLURP2P0DP57 97 aa16.43■□□□□ 0.22
NEK3-210ENST00000620675 EVX2Q03828 476 aa16.43■□□□□ 0.22
NEK3-210ENST00000620675 PICALMQ13492 652 aa16.43■□□□□ 0.22
NEK3-210ENST00000620675 TEX11Q8IYF3 940 aa16.43■□□□□ 0.22
NEK3-210ENST00000620675 PCNTO95613 3336 aa16.43■□□□□ 0.22
NEK3-210ENST00000620675 TRAF5O00463 557 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 FOXP2O15409 715 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 GPAA1O43292 621 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 VPS53Q5VIR6 699 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 LDHDQ86WU2 507 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 TGFBRAP1Q8WUH2 860 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 STRBPQ96SI9 672 aaKnown RBP16.42■□□□□ 0.22
NEK3-210ENST00000620675 TMEM39BQ9GZU3 492 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 DIAPH3Q9NSV4 1193 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 MYO1BO43795 1136 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 SLC4A8Q2Y0W8 1093 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 USP48Q86UV5 1035 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 MAPKAPK5Q8IW41 473 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 AIDAQ96BJ3 306 aa16.42■□□□□ 0.22
NEK3-210ENST00000620675 TRPM7Q96QT4 1865 aa16.41■□□□□ 0.22
NEK3-210ENST00000620675 SMIM22K7EJ46 135 aa16.41■□□□□ 0.22
NEK3-210ENST00000620675 BAG3O95817 575 aa16.41■□□□□ 0.22
NEK3-210ENST00000620675 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
NEK3-210ENST00000620675 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
NEK3-210ENST00000620675 IGSF3O75054 1194 aa16.41■□□□□ 0.22
NEK3-210ENST00000620675 RASA3Q14644 834 aa16.41■□□□□ 0.22
NEK3-210ENST00000620675 SH3BP5LQ7L8J4 393 aa16.41■□□□□ 0.22
NEK3-210ENST00000620675 ZC3H15Q8WU90 426 aaKnown RBP16.41■□□□□ 0.22
NEK3-210ENST00000620675 DEFB129Q9H1M3 183 aa16.41■□□□□ 0.22
NEK3-210ENST00000620675 CEP350Q5VT06 3117 aa16.41■□□□□ 0.22
NEK3-210ENST00000620675 MCMDC2Q4G0Z9 681 aa16.4■□□□□ 0.22
NEK3-210ENST00000620675 DCPSQ96C86 337 aaKnown RBP16.4■□□□□ 0.22
NEK3-210ENST00000620675 IDI2Q9BXS1 227 aa16.4■□□□□ 0.22
NEK3-210ENST00000620675 HELLSQ9NRZ9 838 aa16.4■□□□□ 0.22
NEK3-210ENST00000620675 FZD1Q9UP38 647 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms