RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 UBXN1Q04323 297 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 MCM6Q14566 821 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 DSCC1Q9BVC3 393 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 CTNND2Q9UQB3 1225 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 GPAA1O43292 621 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 BAG3O95817 575 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 ITGA6P23229 1130 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 GSTO1P78417 241 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 BICD1Q96G01 975 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 BCCIPQ9P287 314 aaKnown RBP eCLIP9.46□□□□□ -0.89
ALMS1-208ENST00000620466 CPSF1Q10570 1443 aaKnown RBP9.46□□□□□ -0.89
ALMS1-208ENST00000620466 GIGYF1O75420 1035 aaPredicted RBP9.46□□□□□ -0.89
ALMS1-208ENST00000620466 STAMBPO95630 424 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 CTNNA2P26232 953 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 USP8P40818 1118 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 CUL4AQ13619 759 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 SPECC1Q5M775 1068 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 TRMT1LQ7Z2T5 733 aaKnown RBP9.46□□□□□ -0.89
ALMS1-208ENST00000620466 APPBP2Q92624 585 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 BCL2L12Q9HB09 334 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 AKR1B15C9JRZ8 316 aaPredicted RBP9.46□□□□□ -0.9
ALMS1-208ENST00000620466 PPP2R3AQ06190 1150 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 ELF2Q15723 593 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 SYCP3Q8IZU3 236 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 SEC62Q99442 399 aaKnown RBP9.46□□□□□ -0.9
ALMS1-208ENST00000620466 ARMT1Q9H993 441 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 KCNH3Q9ULD8 1083 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 NSFL1CQ9UNZ2 370 aaKnown RBP9.46□□□□□ -0.9
ALMS1-208ENST00000620466 ADGRB3O60242 1522 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 KIF20AO95235 890 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 LTKP29376 864 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 ZBTB9Q96C00 473 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 ORAI2Q96SN7 254 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 COMMD10Q9Y6G5 202 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 USP6P35125 1406 aa9.46□□□□□ -0.9
ALMS1-208ENST00000620466 ACSBG1Q96GR2 724 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 TMEM87BQ96K49 555 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 MMRN2Q9H8L6 949 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 ADCY9O60503 1353 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 GCOM1H8Y6P7 765 aaPredicted RBP9.45□□□□□ -0.9
ALMS1-208ENST00000620466 MYZAPP0CAP1 466 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 IGSF1Q8N6C5 1336 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 LRRC7Q96NW7 1537 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 IFFO1Q0D2I5 559 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 ZNF174Q15697 407 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 PSMD1Q99460 953 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 NAA15Q9BXJ9 866 aaKnown RBP9.45□□□□□ -0.9
ALMS1-208ENST00000620466 NIP7Q9Y221 180 aaKnown RBP eCLIP9.45□□□□□ -0.9
ALMS1-208ENST00000620466 CTDSPL2Q05D32 466 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 INCENPQ9NQS7 918 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 RBM28Q9NW13 759 aaKnown RBP9.45□□□□□ -0.9
ALMS1-208ENST00000620466 TLR7Q9NYK1 1049 aaKnown RBP9.45□□□□□ -0.9
ALMS1-208ENST00000620466 ANGEL1Q9UNK9 670 aaKnown RBP9.45□□□□□ -0.9
ALMS1-208ENST00000620466 MRVI1Q9Y6F6 885 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 GSTTP1A0A1W2PQM5 241 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 MACROD2A1Z1Q3 448 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 CUTAO60888 179 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 RHOXF2BP0C7M4 288 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 EVCP57679 992 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 CAPZA3Q96KX2 299 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 RHOXF2Q9BQY4 288 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 PSMA7O14818 248 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 LDHCP07864 332 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 TTC6Q86TZ1 520 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 PHKBQ93100 1093 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 MYL10Q9BUA6 226 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 HOMER2Q9NSB8 354 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 GUCA1BQ9UMX6 200 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 STX8Q9UNK0 236 aa9.45□□□□□ -0.9
ALMS1-208ENST00000620466 PFKFB2O60825 505 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 HSF2BPO75031 334 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 ZAP70P43403 619 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 ASIC1P78348 528 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 LRRC27Q9C0I9 530 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 PYCARDQ9ULZ3 195 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 VPS18Q9P253 973 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 ARAP3Q8WWN8 1544 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 VWA3AA6NCI4 1184 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 TMCO5BA8MYB1 307 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 DEXIO95424 95 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 A1BGP04217 495 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 CCT6AP40227 531 aaKnown RBP9.44□□□□□ -0.9
ALMS1-208ENST00000620466 HLTFQ14527 1009 aaKnown RBP eCLIP9.44□□□□□ -0.94e-8■■□□□ 13.7
ALMS1-208ENST00000620466 STXBP4Q6ZWJ1 553 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 ZNF496Q96IT1 587 aaPredicted RBP9.44□□□□□ -0.9
ALMS1-208ENST00000620466 C19orf44Q9H6X5 657 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 ROBO2Q9HCK4 1378 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 AKR1B10O60218 316 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 LRMPQ12912 555 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 RNF187Q5TA31 235 aaPredicted RBP9.44□□□□□ -0.9
ALMS1-208ENST00000620466 GIGYF2Q6Y7W6 1299 aaKnown RBP9.44□□□□□ -0.9
ALMS1-208ENST00000620466 MAATS1Q7Z4T9 603 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 NF2P35240 595 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 NAPAP54920 295 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 PNOCQ13519 176 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 PLCD3Q8N3E9 789 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 PLIN2Q99541 437 aa9.44□□□□□ -0.9
ALMS1-208ENST00000620466 TULP4Q9NRJ4 1543 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 GOLGA6L10A0A0M3HER8 536 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 POLR2DO15514 142 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms