RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 LRCH3Q96II8 777 aa5.89□□□□□ -1.47
SNCA-213ENST00000618500 FASTKD5Q7L8L6 764 aaKnown RBP5.89□□□□□ -1.47
SNCA-213ENST00000618500 UNC93B1Q9H1C4 597 aa5.89□□□□□ -1.47
SNCA-213ENST00000618500 PDHXO00330 501 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 PLA2G5P39877 138 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 GNAI1P63096 354 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 MAP3K21Q5TCX8 1036 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 HHIPL2Q6UWX4 724 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 DZIP1LQ8IYY4 767 aaKnown RBP5.88□□□□□ -1.47
SNCA-213ENST00000618500 GUCD1Q96NT3 240 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 C11orf49Q9H6J7 331 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 MYH16Q9H6N6 1097 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 SIPA1L1O43166 1804 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 MAP4K4O95819 1239 aaPredicted RBP5.88□□□□□ -1.47
SNCA-213ENST00000618500 INHAP05111 366 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 ITGA6P23229 1130 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 KLRK1P26718 216 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 CRKP46108 304 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 NEXNQ0ZGT2 675 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.88□□□□□ -1.47
SNCA-213ENST00000618500 RNF208Q9H0X6 261 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 MBIPQ9NS73 344 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 AOX1Q06278 1338 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 ANKRD18BA2A2Z9 1011 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 ADCY3O60266 1144 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 HMGCRP04035 888 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 PRKCZQ05513 592 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 PRKG1Q13976 671 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 GCKRQ14397 625 aa5.88□□□□□ -1.47
SNCA-213ENST00000618500 IL16Q14005 1332 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 PDS5AQ29RF7 1337 aaKnown RBP5.87□□□□□ -1.47
SNCA-213ENST00000618500 SALL1Q9NSC2 1324 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 BCAMP50895 628 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 SMAD3P84022 425 aaKnown RBP5.87□□□□□ -1.47
SNCA-213ENST00000618500 FAM151AQ8WW52 585 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 MPHOSPH8Q99549 860 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 MAP3K2Q9Y2U5 619 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 CDK5RAP2Q96SN8 1893 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 CLRN2A0PK11 232 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 IRF6O14896 467 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 MAGEA10P43363 369 aaPredicted RBP5.87□□□□□ -1.47
SNCA-213ENST00000618500 KCNJ4P48050 445 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 FOXO4P98177 505 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 FAM110CQ1W6H9 321 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 GTF3C2Q8WUA4 911 aaPredicted RBP5.87□□□□□ -1.47
SNCA-213ENST00000618500 NBPF3Q9H094 633 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 VEZTQ9HBM0 779 aa5.87□□□□□ -1.47
SNCA-213ENST00000618500 SCAF8Q9UPN6 1271 aaKnown RBP5.87□□□□□ -1.47
SNCA-213ENST00000618500 COL11A1P12107 1806 aaPredicted RBP5.87□□□□□ -1.47
SNCA-213ENST00000618500 MROH5Q6ZUA9 1318 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 SPDYE4A6NLX3 237 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 FMNL1O95466 1100 aaPredicted RBP5.86□□□□□ -1.47
SNCA-213ENST00000618500 XRCC5P13010 732 aaKnown RBP5.86□□□□□ -1.47
SNCA-213ENST00000618500 CCDC27Q2M243 656 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 FBXO33Q7Z6M2 555 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 PROCA1Q8NCQ7 364 aaPredicted RBP5.86□□□□□ -1.47
SNCA-213ENST00000618500 LINS1Q8NG48 757 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 FBXW7Q969H0 707 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 PHAXQ9H814 394 aaKnown RBP5.86□□□□□ -1.47
SNCA-213ENST00000618500 MORF4L1Q9UBU8 362 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 STAP2Q9UGK3 403 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 FZD1Q9UP38 647 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 ROBO3Q96MS0 1386 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 UTYO14607 1347 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 GCLCP48506 637 aaPredicted RBP5.86□□□□□ -1.47
SNCA-213ENST00000618500 KRT24Q2M2I5 525 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 TEKT1Q969V4 418 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 WRNIP1Q96S55 665 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 TMOD2Q9NZR1 351 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 PNMA3Q9UL41 463 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 MYH2Q9UKX2 1941 aa5.86□□□□□ -1.47
SNCA-213ENST00000618500 MYBBP1AQ9BQG0 1328 aaKnown RBP5.86□□□□□ -1.47
SNCA-213ENST00000618500 TBC1D12O60347 775 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 GABBR2O75899 941 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 TFRCP02786 760 aaKnown RBP5.85□□□□□ -1.47
SNCA-213ENST00000618500 SOCS4Q8WXH5 440 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 TMEM39BQ9GZU3 492 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 GINM1Q9NU53 330 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 CPA4Q9UI42 421 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 AGTPBP1Q9UPW5 1226 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 AFG3L2Q9Y4W6 797 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 PCDHAC2Q9Y5I4 1007 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 IGSF3O75054 1194 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 C1orf53Q5VUE5 145 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 SCYL3Q8IZE3 742 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 TDRD3Q9H7E2 651 aaKnown RBP5.85□□□□□ -1.47
SNCA-213ENST00000618500 GABRQQ9UN88 632 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 TTF2Q9UNY4 1162 aaKnown RBP5.85□□□□□ -1.47
SNCA-213ENST00000618500 PHF20L1A8MW92 1017 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 ENTPD3O75355 529 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 IGHA2P01877 340 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 SH3D19Q5HYK7 790 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 MFSD14BQ5SR56 506 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 C7orf61Q8IZ16 206 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 COA7Q96BR5 231 aa5.85□□□□□ -1.47
SNCA-213ENST00000618500 UBE2OQ9C0C9 1292 aaKnown RBP5.85□□□□□ -1.47
SNCA-213ENST00000618500 PARP14Q460N5 1801 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 C19orf67A6NJJ6 358 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 TNFRSF10AO00220 468 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 HIBADHP31937 336 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms