RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MAP3K11Q16584 847 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 CAVIN4Q5BKX8 364 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 ILDR1Q86SU0 546 aaPredicted RBP14.51□□□□□ -0.09
CIITA-212ENST00000618207 ZNF830Q96NB3 372 aaPredicted RBP14.51□□□□□ -0.09
CIITA-212ENST00000618207 ELP1O95163 1332 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 RPS6KA4O75676 772 aa14.5□□□□□ -0.09
CIITA-212ENST00000618207 NAA16Q6N069 864 aaPredicted RBP14.5□□□□□ -0.09
CIITA-212ENST00000618207 PDLIM2Q96JY6 352 aa14.5□□□□□ -0.09
CIITA-212ENST00000618207 NARFQ9UHQ1 456 aa14.5□□□□□ -0.09
CIITA-212ENST00000618207 DHX16O60231 1041 aaKnown RBP14.5□□□□□ -0.09
CIITA-212ENST00000618207 CLCN1P35523 988 aa14.5□□□□□ -0.09
CIITA-212ENST00000618207 RPS8P62241 208 aaKnown RBP14.5□□□□□ -0.09
CIITA-212ENST00000618207 APOA5Q6Q788 366 aa14.5□□□□□ -0.09
CIITA-212ENST00000618207 MFSD6Q6ZSS7 791 aa14.5□□□□□ -0.09
CIITA-212ENST00000618207 BSDC1Q9NW68 430 aaPredicted RBP14.5□□□□□ -0.09
CIITA-212ENST00000618207 SH2B2O14492 632 aaPredicted RBP14.49□□□□□ -0.09
CIITA-212ENST00000618207 PRDM1O75626 825 aa14.49□□□□□ -0.09
CIITA-212ENST00000618207 CCDC192P0DO97 292 aa14.49□□□□□ -0.09
CIITA-212ENST00000618207 RFC4P35249 363 aa14.49□□□□□ -0.09
CIITA-212ENST00000618207 ZSCAN30Q86W11 494 aa14.49□□□□□ -0.09
CIITA-212ENST00000618207 FAM84BQ96KN1 310 aaPredicted RBP14.49□□□□□ -0.09
CIITA-212ENST00000618207 ADCY5O95622 1261 aa14.49□□□□□ -0.09
CIITA-212ENST00000618207 FAM196AQ6ZSG2 479 aa14.49□□□□□ -0.09
CIITA-212ENST00000618207 CCAR1Q8IX12 1150 aaKnown RBP14.49□□□□□ -0.09
CIITA-212ENST00000618207 FNBP4Q8N3X1 1017 aaPredicted RBP14.49□□□□□ -0.09
CIITA-212ENST00000618207 GNL3LQ9NVN8 582 aaKnown RBP14.49□□□□□ -0.09
CIITA-212ENST00000618207 ZBTB43O43298 467 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 SF3B3Q15393 1217 aaKnown RBP14.48□□□□□ -0.09
CIITA-212ENST00000618207 TPTE2Q6XPS3 522 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 LUZP1Q86V48 1076 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 TXNRD3Q86VQ6 643 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 NUP133Q8WUM0 1156 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 CHMP4CQ96CF2 233 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 NAP1L5Q96NT1 182 aaPredicted RBP14.48□□□□□ -0.09
CIITA-212ENST00000618207 GPR101Q96P66 508 aaPredicted RBP14.48□□□□□ -0.09
CIITA-212ENST00000618207 FUCA2Q9BTY2 467 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 NACAP1Q9BZK3 213 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 CNTNAP4Q9C0A0 1308 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 GOLGA8AA7E2F4 631 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 KIF28PB7ZC32 967 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 EVCP57679 992 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 EVX2Q03828 476 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 TYRO3Q06418 890 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 SF3A1Q15459 793 aaKnown RBP14.48□□□□□ -0.09
CIITA-212ENST00000618207 AKNAD1Q5T1N1 836 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 IGDCC4Q8TDY8 1250 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 ALG1Q9BT22 464 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 CLIC4Q9Y696 253 aa14.48□□□□□ -0.09
CIITA-212ENST00000618207 MAGEB6P1A0A0J9YX57 407 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 CCDC69A6NI79 296 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 GNL2Q13823 731 aaKnown RBP14.47□□□□□ -0.09
CIITA-212ENST00000618207 FBXO18Q8NFZ0 1043 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 GOLPH3LQ9H4A5 285 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 SLC12A7Q9Y666 1083 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 ATRNO75882 1429 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 BAZ2BQ9UIF8 2168 aaKnown RBP14.47□□□□□ -0.09
CIITA-212ENST00000618207 ANO6Q4KMQ2 910 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 ZNF396Q96N95 335 aaPredicted RBP14.47□□□□□ -0.09
CIITA-212ENST00000618207 LY9Q9HBG7 655 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 LRP5O75197 1615 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 UBE4AQ14139 1066 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 SPC24Q8NBT2 197 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 GJD4Q96KN9 370 aaPredicted RBP14.47□□□□□ -0.09
CIITA-212ENST00000618207 SLC26A6Q9BXS9 759 aa14.47□□□□□ -0.09
CIITA-212ENST00000618207 COL5A3P25940 1745 aaPredicted RBP14.46□□□□□ -0.09
CIITA-212ENST00000618207 A0A1B0GVL5 298 aa14.46□□□□□ -0.09
CIITA-212ENST00000618207 AP5Z1O43299 807 aa14.46□□□□□ -0.09
CIITA-212ENST00000618207 PRDX5P30044 214 aa14.46□□□□□ -0.09
CIITA-212ENST00000618207 STK38Q15208 465 aa14.46□□□□□ -0.09
CIITA-212ENST00000618207 AATFQ9NY61 560 aaKnown RBP eCLIP14.46□□□□□ -0.09
CIITA-212ENST00000618207 ANKIB1Q9P2G1 1089 aa14.46□□□□□ -0.09
CIITA-212ENST00000618207 MRVI1Q9Y6F6 885 aa14.46□□□□□ -0.09
CIITA-212ENST00000618207 COL1A1P02452 1464 aaPredicted RBP14.46□□□□□ -0.09
CIITA-212ENST00000618207 BTAF1O14981 1849 aa14.46□□□□□ -0.1
CIITA-212ENST00000618207 MARCKSP29966 332 aaPredicted RBP14.46□□□□□ -0.1
CIITA-212ENST00000618207 TRAPPC3LQ5T215 181 aa14.46□□□□□ -0.1
CIITA-212ENST00000618207 FSIP1Q8NA03 581 aa14.46□□□□□ -0.1
CIITA-212ENST00000618207 NYXQ9GZU5 481 aa14.46□□□□□ -0.1
CIITA-212ENST00000618207 DNAJC25Q9H1X3 360 aa14.46□□□□□ -0.1
CIITA-212ENST00000618207 LRRC4BQ9NT99 713 aa14.46□□□□□ -0.1
CIITA-212ENST00000618207 ZMYM6O95789 1325 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 AFF2P51816 1311 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 BAZ2AQ9UIF9 1905 aaKnown RBP14.45□□□□□ -0.1
CIITA-212ENST00000618207 IARSP41252 1262 aaKnown RBP14.45□□□□□ -0.1
CIITA-212ENST00000618207 PPARAQ07869 468 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 SASS6Q6UVJ0 657 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 SYNE3Q6ZMZ3 975 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 SEPT12Q8IYM1 358 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 FBXL16Q8N461 479 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 ZNF384Q8TF68 577 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 CLSTN2Q9H4D0 955 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 DDX19AQ9NUU7 478 aaKnown RBP14.45□□□□□ -0.1
CIITA-212ENST00000618207 RCOR1Q9UKL0 485 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 PCDHA7Q9UN72 937 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 RTL9Q8NET4 1388 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 CCDC73Q6ZRK6 1079 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 TMEM87BQ96K49 555 aa14.45□□□□□ -0.1
CIITA-212ENST00000618207 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.45□□□□□ -0.1
CIITA-212ENST00000618207 hCG_1642624A0A1W2PR95 340 aa14.44□□□□□ -0.1
CIITA-212ENST00000618207 RANBP6O60518 1105 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms