RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 GIGYF2Q6Y7W6 1299 aaKnown RBP12.51□□□□□ -0.41
POLR2A-209ENST00000617998 PARK7Q99497 189 aaKnown RBP12.51□□□□□ -0.41
POLR2A-209ENST00000617998 ELP3Q9H9T3 547 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 SSX2IPQ9Y2D8 614 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 DDX49Q9Y6V7 483 aaKnown RBP12.51□□□□□ -0.41
POLR2A-209ENST00000617998 ZBTB43O43298 467 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
POLR2A-209ENST00000617998 DDX39AO00148 427 aaKnown RBP12.51□□□□□ -0.41
POLR2A-209ENST00000617998 ARMT1Q9H993 441 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 PRAG1Q86YV5 1406 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 ERVV-1B6SEH8 477 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
POLR2A-209ENST00000617998 DEFB115Q30KQ5 88 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 PPM1EQ8WY54 764 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 PSMD1Q99460 953 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 TIMM10P62072 90 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 LRRC45Q96CN5 670 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 NAP1L4Q99733 375 aaKnown RBP12.51□□□□□ -0.41
POLR2A-209ENST00000617998 CHMP2AO43633 222 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 GLT8D2Q9H1C3 349 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 RALGAPBQ86X10 1494 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 IGBP1P78318 339 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 FERMT1Q9BQL6 677 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 COL15A1P39059 1388 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 RTL1A6NKG5 1358 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 FGFR1OPO95684 399 aaKnown RBP12.5□□□□□ -0.41
POLR2A-209ENST00000617998 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
POLR2A-209ENST00000617998 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 CD2APQ9Y5K6 639 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 IL13P35225 146 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 CCDC155Q8N6L0 562 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 ANO3Q9BYT9 981 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 RSPH6AQ9H0K4 717 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 C1orf167Q5SNV9 1468 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 FCGRTP55899 365 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 SNAPC2Q13487 334 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 ODR4Q5SWX8 454 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 PODNQ7Z5L7 613 aa12.5□□□□□ -0.41
POLR2A-209ENST00000617998 SORBS3O60504 671 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 FAM13AO94988 1023 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 UBE4AQ14139 1066 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 CCPG1Q9ULG6 757 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 CEP83Q9Y592 693 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 GOLGA6L1Q8N7Z2 621 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 MRPL11Q9Y3B7 192 aaKnown RBP12.49□□□□□ -0.41
POLR2A-209ENST00000617998 PRAMEF22A3QJZ6 481 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 NFIXQ14938 502 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 SEMA3EO15041 775 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 STRN3Q13033 797 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 TBC1D9BQ66K14 1250 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 GOLGA1Q92805 767 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 GTPBP6O43824 516 aaPredicted RBP12.49□□□□□ -0.41
POLR2A-209ENST00000617998 RPS6KC1Q96S38 1066 aa12.49□□□□□ -0.41
POLR2A-209ENST00000617998 KRT13P13646 458 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 SLFN5Q08AF3 891 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 EPB41L2O43491 1005 aaKnown RBP12.48□□□□□ -0.41
POLR2A-209ENST00000617998 GBA2Q9HCG7 927 aaPredicted RBP12.48□□□□□ -0.41
POLR2A-209ENST00000617998 MYO6Q9UM54 1294 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 AATKQ6ZMQ8 1374 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 AKNAD1Q5T1N1 836 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 PIDD1Q9HB75 910 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 CPS1P31327 1500 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 SLC9C1Q4G0N8 1177 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 FAM135BQ49AJ0 1406 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 EIF4A1P60842 406 aaKnown RBP12.48□□□□□ -0.41
POLR2A-209ENST00000617998 MAP2K1Q02750 393 aaPredicted RBP12.48□□□□□ -0.41
POLR2A-209ENST00000617998 UIMC1Q96RL1 719 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 ATG3Q9NT62 314 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 KRT24Q2M2I5 525 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 GGA3Q9NZ52 723 aa12.48□□□□□ -0.41
POLR2A-209ENST00000617998 NOC2LQ9Y3T9 749 aaKnown RBP12.48□□□□□ -0.41
POLR2A-209ENST00000617998 SMTNP53814 917 aa12.47□□□□□ -0.41
POLR2A-209ENST00000617998 C1orf228Q6PIY5 440 aa12.47□□□□□ -0.41
POLR2A-209ENST00000617998 MMRN2Q9H8L6 949 aa12.47□□□□□ -0.41
POLR2A-209ENST00000617998 RTEL1Q9NZ71 1219 aa12.47□□□□□ -0.41
POLR2A-209ENST00000617998 TTC30AQ86WT1 665 aa12.47□□□□□ -0.41
POLR2A-209ENST00000617998 CCL15-CCL14A0A0B4J2E2 113 aa12.47□□□□□ -0.41
POLR2A-209ENST00000617998 CCL15Q16663 113 aa12.47□□□□□ -0.41
POLR2A-209ENST00000617998 IQSEC2Q5JU85 1478 aa12.47□□□□□ -0.41
POLR2A-209ENST00000617998 CCDC169A6NNP5 214 aa12.47□□□□□ -0.41
POLR2A-209ENST00000617998 GMPSP49915 693 aaPredicted RBP12.47□□□□□ -0.41
POLR2A-209ENST00000617998 ELF1P32519 619 aa12.47□□□□□ -0.41
POLR2A-209ENST00000617998 ZNF215Q9UL58 517 aaPredicted RBP12.47□□□□□ -0.41
POLR2A-209ENST00000617998 RABEP1Q15276 862 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 ADARB2Q9NS39 739 aaKnown RBP12.46□□□□□ -0.41
POLR2A-209ENST00000617998 CLASP1Q7Z460 1538 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 CETPP11597 493 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 GUCY1B3Q02153 619 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 TXLNBQ8N3L3 684 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 ERO1AQ96HE7 468 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 CFAP45Q9UL16 551 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 TRIM17Q9Y577 477 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 MRVI1Q9Y6F6 885 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 MARCH10Q8NA82 808 aaPredicted RBP12.46□□□□□ -0.41
POLR2A-209ENST00000617998 MEIS3Q99687 375 aa12.46□□□□□ -0.41
POLR2A-209ENST00000617998 DHX36Q9H2U1 1008 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms