RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 TAOK2Q9UL54 1235 aa14□□□□□ -0.17
PDPN-211ENST00000617617 COL2A1P02458 1487 aaPredicted RBP14□□□□□ -0.17
PDPN-211ENST00000617617 BAG3O95817 575 aa14□□□□□ -0.17
PDPN-211ENST00000617617 FGAP02671 866 aa14□□□□□ -0.17
PDPN-211ENST00000617617 CYP21A2P08686 494 aa14□□□□□ -0.17
PDPN-211ENST00000617617 FHDC1Q9C0D6 1143 aaPredicted RBP14□□□□□ -0.17
PDPN-211ENST00000617617 DBNDD1Q9H9R9 158 aa14□□□□□ -0.17
PDPN-211ENST00000617617 MKRN1Q9UHC7 482 aaKnown RBP14□□□□□ -0.17
PDPN-211ENST00000617617 SBK1Q52WX2 424 aa14□□□□□ -0.17
PDPN-211ENST00000617617 IFNL3Q8IZI9 196 aa14□□□□□ -0.17
PDPN-211ENST00000617617 GMLQ99445 158 aa14□□□□□ -0.17
PDPN-211ENST00000617617 NACAP1Q9BZK3 213 aa14□□□□□ -0.17
PDPN-211ENST00000617617 ARMT1Q9H993 441 aa14□□□□□ -0.17
PDPN-211ENST00000617617 EPB41L4AQ9HCS5 686 aaPredicted RBP14□□□□□ -0.17
PDPN-211ENST00000617617 NPM3O75607 178 aaKnown RBP13.99□□□□□ -0.17
PDPN-211ENST00000617617 HMGB1P09429 215 aaKnown RBP13.99□□□□□ -0.17
PDPN-211ENST00000617617 PCP11498 1178 aaKnown RBP13.99□□□□□ -0.17
PDPN-211ENST00000617617 BECN1Q14457 450 aa13.99□□□□□ -0.17
PDPN-211ENST00000617617 TTC14Q96N46 770 aa13.99□□□□□ -0.17
PDPN-211ENST00000617617 CRNKL1Q9BZJ0 848 aaKnown RBP13.99□□□□□ -0.17
PDPN-211ENST00000617617 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
PDPN-211ENST00000617617 SERPINA10Q9UK55 444 aa13.99□□□□□ -0.17
PDPN-211ENST00000617617 IMMTQ16891 758 aaKnown RBP13.99□□□□□ -0.17
PDPN-211ENST00000617617 NIM1KQ8IY84 436 aa13.99□□□□□ -0.17
PDPN-211ENST00000617617 LARGE2Q8N3Y3 721 aa13.99□□□□□ -0.17
PDPN-211ENST00000617617 ZDHHC15Q96MV8 337 aa13.99□□□□□ -0.17
PDPN-211ENST00000617617 ROBO3Q96MS0 1386 aa13.99□□□□□ -0.17
PDPN-211ENST00000617617 SIPA1L1O43166 1804 aa13.98□□□□□ -0.17
PDPN-211ENST00000617617 FGRP09769 529 aa13.98□□□□□ -0.17
PDPN-211ENST00000617617 AGBL3Q8NEM8 1001 aa13.98□□□□□ -0.17
PDPN-211ENST00000617617 ZNF277Q9NRM2 450 aaPredicted RBP13.98□□□□□ -0.17
PDPN-211ENST00000617617 ST18O60284 1047 aa13.98□□□□□ -0.17
PDPN-211ENST00000617617 RSBN1LQ6PCB5 846 aaPredicted RBP13.98□□□□□ -0.17
PDPN-211ENST00000617617 MTMR14Q8NCE2 650 aa13.98□□□□□ -0.17
PDPN-211ENST00000617617 BCS1LQ9Y276 419 aa13.98□□□□□ -0.17
PDPN-211ENST00000617617 SLC4A4Q9Y6R1 1079 aa13.98□□□□□ -0.17
PDPN-211ENST00000617617 RUFY3Q7L099 469 aa13.97□□□□□ -0.17
PDPN-211ENST00000617617 NOL10Q9BSC4 688 aaKnown RBP13.97□□□□□ -0.17
PDPN-211ENST00000617617 SYT17Q9BSW7 474 aa13.97□□□□□ -0.17
PDPN-211ENST00000617617 DAGLAQ9Y4D2 1042 aa13.97□□□□□ -0.17
PDPN-211ENST00000617617 GREB1LQ9C091 1923 aaPredicted RBP13.97□□□□□ -0.17
PDPN-211ENST00000617617 FZD9O00144 591 aa13.97□□□□□ -0.17
PDPN-211ENST00000617617 RHBDL3P58872 404 aa13.97□□□□□ -0.17
PDPN-211ENST00000617617 MTA3Q9BTC8 594 aa13.97□□□□□ -0.17
PDPN-211ENST00000617617 MIGA1Q8NAN2 632 aa13.96□□□□□ -0.17
PDPN-211ENST00000617617 NBPF3Q9H094 633 aa13.96□□□□□ -0.17
PDPN-211ENST00000617617 ZNF213O14771 459 aa13.96□□□□□ -0.17
PDPN-211ENST00000617617 RPS12P25398 132 aaKnown RBP13.96□□□□□ -0.17
PDPN-211ENST00000617617 DYNLL1P63167 89 aaKnown RBP13.96□□□□□ -0.17
PDPN-211ENST00000617617 STAG1Q8WVM7 1258 aa13.96□□□□□ -0.17
PDPN-211ENST00000617617 TEKT1Q969V4 418 aa13.96□□□□□ -0.17
PDPN-211ENST00000617617 TBC1D2Q9BYX2 928 aa13.96□□□□□ -0.17
PDPN-211ENST00000617617 KCNQ5Q9NR82 932 aa13.96□□□□□ -0.17
PDPN-211ENST00000617617 ARPP21Q9UBL0 812 aaPredicted RBP13.96□□□□□ -0.17
PDPN-211ENST00000617617 PPP1R1BQ9UD71 204 aaPredicted RBP13.96□□□□□ -0.17
PDPN-211ENST00000617617 TTF2Q9UNY4 1162 aaKnown RBP13.96□□□□□ -0.17
PDPN-211ENST00000617617 JAG2Q9Y219 1238 aa13.96□□□□□ -0.17
PDPN-211ENST00000617617 SOCS7O14512 581 aa13.96□□□□□ -0.18
PDPN-211ENST00000617617 RPS6KB1P23443 525 aa13.96□□□□□ -0.18
PDPN-211ENST00000617617 BTDP43251 543 aa13.96□□□□□ -0.18
PDPN-211ENST00000617617 ADCK5Q3MIX3 580 aa13.96□□□□□ -0.18
PDPN-211ENST00000617617 AGXT2Q9BYV1 514 aa13.96□□□□□ -0.18
PDPN-211ENST00000617617 NAPBQ9H115 298 aa13.96□□□□□ -0.18
PDPN-211ENST00000617617 AATFQ9NY61 560 aaKnown RBP eCLIP13.96□□□□□ -0.18
PDPN-211ENST00000617617 E7EWF7 191 aa13.95□□□□□ -0.18
PDPN-211ENST00000617617 TNIP1Q15025 636 aa13.95□□□□□ -0.18
PDPN-211ENST00000617617 DIXDC1Q155Q3 683 aa13.95□□□□□ -0.18
PDPN-211ENST00000617617 STOX1Q6ZVD7 989 aa13.95□□□□□ -0.18
PDPN-211ENST00000617617 DCP1AQ9NPI6 582 aaPredicted RBP13.95□□□□□ -0.18
PDPN-211ENST00000617617 CYP46A1Q9Y6A2 500 aa13.95□□□□□ -0.18
PDPN-211ENST00000617617 PRKAB2O43741 272 aa13.95□□□□□ -0.18
PDPN-211ENST00000617617 EXOSC10Q01780 885 aaKnown RBP13.95□□□□□ -0.18
PDPN-211ENST00000617617 NEK1Q96PY6 1258 aa13.95□□□□□ -0.18
PDPN-211ENST00000617617 CRKP46108 304 aa13.94□□□□□ -0.18
PDPN-211ENST00000617617 PRELPP51888 382 aa13.94□□□□□ -0.18
PDPN-211ENST00000617617 APOBEC3HQ6NTF7 200 aaKnown RBP13.94□□□□□ -0.18
PDPN-211ENST00000617617 HSCBQ8IWL3 235 aa13.94□□□□□ -0.18
PDPN-211ENST00000617617 JDP2Q8WYK2 163 aa13.94□□□□□ -0.18
PDPN-211ENST00000617617 JAKMIP1Q96N16 626 aaKnown RBP13.94□□□□□ -0.18
PDPN-211ENST00000617617 CNNM2Q9H8M5 875 aa13.94□□□□□ -0.18
PDPN-211ENST00000617617 PSMD14O00487 310 aa13.94□□□□□ -0.18
PDPN-211ENST00000617617 CASTP20810 708 aaKnown RBP13.94□□□□□ -0.18
PDPN-211ENST00000617617 ANKRD1Q15327 319 aa13.94□□□□□ -0.18
PDPN-211ENST00000617617 SH3RF3Q8TEJ3 882 aaPredicted RBP13.94□□□□□ -0.18
PDPN-211ENST00000617617 ZBED3Q96IU2 234 aaPredicted RBP13.94□□□□□ -0.18
PDPN-211ENST00000617617 TAF6LQ9Y6J9 622 aa13.94□□□□□ -0.18
PDPN-211ENST00000617617 K7ELQ4 463 aaPredicted RBP13.93□□□□□ -0.18
PDPN-211ENST00000617617 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
PDPN-211ENST00000617617 BLOC1S2Q6QNY1 142 aa13.93□□□□□ -0.18
PDPN-211ENST00000617617 DHX32Q7L7V1 743 aaKnown RBP13.93□□□□□ -0.18
PDPN-211ENST00000617617 MB21D2Q8IYB1 491 aaPredicted RBP13.93□□□□□ -0.18
PDPN-211ENST00000617617 IDI2Q9BXS1 227 aa13.93□□□□□ -0.18
PDPN-211ENST00000617617 RNF41Q9H4P4 317 aaPredicted RBP13.93□□□□□ -0.18
PDPN-211ENST00000617617 LMNB1P20700 586 aa13.93□□□□□ -0.18
PDPN-211ENST00000617617 NEK4P51957 841 aa13.93□□□□□ -0.18
PDPN-211ENST00000617617 ZNF280AP59817 542 aaPredicted RBP13.93□□□□□ -0.18
PDPN-211ENST00000617617 CXCL9Q07325 125 aa13.93□□□□□ -0.18
PDPN-211ENST00000617617 CIAPIN1Q6FI81 312 aa13.93□□□□□ -0.18
PDPN-211ENST00000617617 KLHL34Q8N239 644 aa13.93□□□□□ -0.18
PDPN-211ENST00000617617 TDO2P48775 406 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms