RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 ERICH6Q7L0X2 663 aa20.9■□□□□ 0.94
LHX1-202ENST00000616237 ARMC9Q7Z3E5 817 aa20.9■□□□□ 0.94
LHX1-202ENST00000616237 AACSQ86V21 672 aa20.9■□□□□ 0.94
LHX1-202ENST00000616237 USP2O75604 605 aaPredicted RBP20.89■□□□□ 0.93
LHX1-202ENST00000616237 TNNI2P48788 182 aa20.89■□□□□ 0.93
LHX1-202ENST00000616237 KIF23Q02241 960 aaPredicted RBP20.89■□□□□ 0.93
LHX1-202ENST00000616237 NFIAQ12857 509 aa20.89■□□□□ 0.93
LHX1-202ENST00000616237 SPTY2D1Q68D10 685 aaPredicted RBP20.89■□□□□ 0.93
LHX1-202ENST00000616237 FAM83AQ86UY5 434 aa20.89■□□□□ 0.93
LHX1-202ENST00000616237 DZIP1Q86YF9 867 aaKnown RBP20.89■□□□□ 0.93
LHX1-202ENST00000616237 FAM163AQ96GL9 167 aaPredicted RBP20.89■□□□□ 0.93
LHX1-202ENST00000616237 MYH2Q9UKX2 1941 aa20.89■□□□□ 0.93
LHX1-202ENST00000616237 CYP2E1P05181 493 aaPredicted RBP20.88■□□□□ 0.93
LHX1-202ENST00000616237 NSUN4Q96CB9 384 aaKnown RBP20.88■□□□□ 0.93
LHX1-202ENST00000616237 KIF1BPQ96EK5 621 aa20.88■□□□□ 0.93
LHX1-202ENST00000616237 TMOD2Q9NZR1 351 aa20.88■□□□□ 0.93
LHX1-202ENST00000616237 ZAP70P43403 619 aa20.87■□□□□ 0.93
LHX1-202ENST00000616237 USP40Q9NVE5 1235 aa20.87■□□□□ 0.93
LHX1-202ENST00000616237 FAM198AQ9UFP1 575 aa20.87■□□□□ 0.93
LHX1-202ENST00000616237 PPP1R12BO60237 982 aaPredicted RBP20.86■□□□□ 0.93
LHX1-202ENST00000616237 RAB11FIP3O75154 756 aa20.86■□□□□ 0.93
LHX1-202ENST00000616237 COL13A1Q5TAT6 717 aaPredicted RBP20.86■□□□□ 0.93
LHX1-202ENST00000616237 AIDAQ96BJ3 306 aa20.86■□□□□ 0.93
LHX1-202ENST00000616237 CLMNQ96JQ2 1002 aa20.86■□□□□ 0.93
LHX1-202ENST00000616237 PCDHB15Q9Y5E8 787 aa20.86■□□□□ 0.93
LHX1-202ENST00000616237 MROH7-TTC4A0A0A0MT08 1334 aa20.86■□□□□ 0.93
LHX1-202ENST00000616237 HSPA8P11142 646 aaKnown RBP20.85■□□□□ 0.93
LHX1-202ENST00000616237 ZFPM1Q8IX07 1006 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 CSRNP1Q96S65 589 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 CRBNQ96SW2 442 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 PIH1D3Q9NQM4 214 aaKnown RBP20.85■□□□□ 0.93
LHX1-202ENST00000616237 RAI14Q9P0K7 980 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 NDUFB9Q9Y6M9 179 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 RFX7Q2KHR2 1363 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 GPR75-ASB3A0A0A6YYF3 556 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 BTDP43251 543 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 CTCFP49711 727 aaPredicted RBP20.85■□□□□ 0.93
LHX1-202ENST00000616237 TCP10Q12799 353 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 CLASRPQ8N2M8 674 aaKnown RBP20.85■□□□□ 0.93
LHX1-202ENST00000616237 FAM151AQ8WW52 585 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 LRP2BPQ9P2M1 347 aa20.85■□□□□ 0.93
LHX1-202ENST00000616237 RHBDL3P58872 404 aa20.84■□□□□ 0.93
LHX1-202ENST00000616237 SLF2Q8IX21 1173 aa20.84■□□□□ 0.93
LHX1-202ENST00000616237 TSKSQ9UJT2 592 aa20.84■□□□□ 0.93
LHX1-202ENST00000616237 RPAP1Q9BWH6 1393 aaPredicted RBP20.83■□□□□ 0.93
LHX1-202ENST00000616237 MYO5AQ9Y4I1 1855 aaKnown RBP20.83■□□□□ 0.92
LHX1-202ENST00000616237 WDHD1O75717 1129 aaPredicted RBP20.83■□□□□ 0.92
LHX1-202ENST00000616237 LBX1P52954 281 aa20.83■□□□□ 0.92
LHX1-202ENST00000616237 MKRN3Q13064 507 aaKnown RBP20.83■□□□□ 0.92
LHX1-202ENST00000616237 IDI2Q9BXS1 227 aa20.83■□□□□ 0.92
LHX1-202ENST00000616237 BCL11AQ9H165 835 aa20.83■□□□□ 0.92
LHX1-202ENST00000616237 ANTXR1Q9H6X2 564 aa20.83■□□□□ 0.92
LHX1-202ENST00000616237 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.83■□□□□ 0.92
LHX1-202ENST00000616237 IREB2P48200 963 aaKnown RBP20.82■□□□□ 0.92
LHX1-202ENST00000616237 RGS3P49796 1198 aa20.82■□□□□ 0.92
LHX1-202ENST00000616237 SPRYD7Q5W111 196 aa20.82■□□□□ 0.92
LHX1-202ENST00000616237 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.82■□□□□ 0.92
LHX1-202ENST00000616237 ADGRA1Q86SQ6 560 aa20.82■□□□□ 0.92
LHX1-202ENST00000616237 BEGAINQ9BUH8 593 aa20.82■□□□□ 0.92
LHX1-202ENST00000616237 DCTPP1Q9H773 170 aa20.82■□□□□ 0.92
LHX1-202ENST00000616237 DDX4Q9NQI0 724 aaKnown RBP20.82■□□□□ 0.92
LHX1-202ENST00000616237 OTOFQ9HC10 1997 aa20.81■□□□□ 0.92
LHX1-202ENST00000616237 UNCXA6NJT0 531 aa20.81■□□□□ 0.92
LHX1-202ENST00000616237 SMARCA5O60264 1052 aaPredicted RBP20.81■□□□□ 0.92
LHX1-202ENST00000616237 GSTO1P78417 241 aa20.81■□□□□ 0.92
LHX1-202ENST00000616237 SH3BP5LQ7L8J4 393 aa20.81■□□□□ 0.92
LHX1-202ENST00000616237 ANKRD13AQ8IZ07 590 aa20.81■□□□□ 0.92
LHX1-202ENST00000616237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.81■□□□□ 0.92
LHX1-202ENST00000616237 SLC10A4Q96EP9 437 aa20.81■□□□□ 0.92
LHX1-202ENST00000616237 LDHCP07864 332 aa20.8■□□□□ 0.92
LHX1-202ENST00000616237 IFIT2P09913 472 aaKnown RBP20.8■□□□□ 0.92
LHX1-202ENST00000616237 GJA5P36382 358 aa20.8■□□□□ 0.92
LHX1-202ENST00000616237 NAA16Q6N069 864 aaPredicted RBP20.8■□□□□ 0.92
LHX1-202ENST00000616237 MIGA2Q7L4E1 593 aa20.8■□□□□ 0.92
LHX1-202ENST00000616237 LRRCC1Q9C099 1032 aa20.8■□□□□ 0.92
LHX1-202ENST00000616237 ENTPD3O75355 529 aa20.79■□□□□ 0.92
LHX1-202ENST00000616237 MAP3K9P80192 1104 aa20.79■□□□□ 0.92
LHX1-202ENST00000616237 WNK4Q96J92 1243 aa20.79■□□□□ 0.92
LHX1-202ENST00000616237 PRDM10Q9NQV6 1147 aa20.79■□□□□ 0.92
LHX1-202ENST00000616237 RNF186Q9NXI6 227 aa20.79■□□□□ 0.92
LHX1-202ENST00000616237 MAST2Q6P0Q8 1798 aa20.79■□□□□ 0.92
LHX1-202ENST00000616237 ATRNL1Q5VV63 1379 aa20.78■□□□□ 0.92
LHX1-202ENST00000616237 CA12O43570 354 aa20.78■□□□□ 0.92
LHX1-202ENST00000616237 VGLL4Q14135 290 aa20.78■□□□□ 0.92
LHX1-202ENST00000616237 CNKSR2Q8WXI2 1034 aa20.78■□□□□ 0.92
LHX1-202ENST00000616237 ELP3Q9H9T3 547 aa20.78■□□□□ 0.92
LHX1-202ENST00000616237 DDTLA6NHG4 134 aaPredicted RBP20.77■□□□□ 0.92
LHX1-202ENST00000616237 SLURP2P0DP57 97 aa20.77■□□□□ 0.92
LHX1-202ENST00000616237 TM4SF4P48230 202 aa20.77■□□□□ 0.92
LHX1-202ENST00000616237 PICALMQ13492 652 aa20.77■□□□□ 0.92
LHX1-202ENST00000616237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.77■□□□□ 0.92
LHX1-202ENST00000616237 AATFQ9NY61 560 aaKnown RBP eCLIP20.77■□□□□ 0.92
LHX1-202ENST00000616237 IDH1O75874 414 aaKnown RBP20.76■□□□□ 0.91
LHX1-202ENST00000616237 PPP4CP60510 307 aa20.76■□□□□ 0.91
LHX1-202ENST00000616237 REM2Q8IYK8 340 aaPredicted RBP20.76■□□□□ 0.91
LHX1-202ENST00000616237 SH3RF3Q8TEJ3 882 aaPredicted RBP20.76■□□□□ 0.91
LHX1-202ENST00000616237 EDC3Q96F86 508 aaKnown RBP20.76■□□□□ 0.91
LHX1-202ENST00000616237 WRNIP1Q96S55 665 aa20.76■□□□□ 0.91
LHX1-202ENST00000616237 DOCK2Q92608 1830 aa20.76■□□□□ 0.91
LHX1-202ENST00000616237 IGSF3O75054 1194 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms