RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 IL15P40933 162 aaPredicted RBP25.87■■□□□ 1.73
TRAPPC3-208ENST00000616074 RARSP54136 660 aaKnown RBP25.87■■□□□ 1.73
TRAPPC3-208ENST00000616074 DCAF15Q66K64 600 aa25.87■■□□□ 1.73
TRAPPC3-208ENST00000616074 ERO1BQ86YB8 467 aa25.87■■□□□ 1.73
TRAPPC3-208ENST00000616074 ZFYVE28Q9HCC9 887 aa25.87■■□□□ 1.73
TRAPPC3-208ENST00000616074 GNL3LQ9NVN8 582 aaKnown RBP25.87■■□□□ 1.73
TRAPPC3-208ENST00000616074 PHKA1P46020 1223 aa25.86■■□□□ 1.73
TRAPPC3-208ENST00000616074 CDC42EP5Q6NZY7 148 aa25.86■■□□□ 1.73
TRAPPC3-208ENST00000616074 MIGA2Q7L4E1 593 aa25.86■■□□□ 1.73
TRAPPC3-208ENST00000616074 FAM151AQ8WW52 585 aa25.86■■□□□ 1.73
TRAPPC3-208ENST00000616074 HDAC5Q9UQL6 1122 aa25.86■■□□□ 1.73
TRAPPC3-208ENST00000616074 RBBP6Q7Z6E9 1792 aaKnown RBP25.86■■□□□ 1.73
TRAPPC3-208ENST00000616074 MKI67P46013 3256 aaKnown RBP25.85■■□□□ 1.73
TRAPPC3-208ENST00000616074 ZNF341Q9BYN7 854 aa25.85■■□□□ 1.73
TRAPPC3-208ENST00000616074 COPRSQ9NQ92 184 aa25.85■■□□□ 1.73
TRAPPC3-208ENST00000616074 SALL1Q9NSC2 1324 aa25.85■■□□□ 1.73
TRAPPC3-208ENST00000616074 MYH2Q9UKX2 1941 aa25.84■■□□□ 1.73
TRAPPC3-208ENST00000616074 CCER2I3L3R5 266 aa25.84■■□□□ 1.73
TRAPPC3-208ENST00000616074 IRF6O14896 467 aa25.84■■□□□ 1.73
TRAPPC3-208ENST00000616074 LDHBP07195 334 aaKnown RBP25.84■■□□□ 1.73
TRAPPC3-208ENST00000616074 CETPP11597 493 aa25.84■■□□□ 1.73
TRAPPC3-208ENST00000616074 ADORA1P30542 326 aa25.84■■□□□ 1.73
TRAPPC3-208ENST00000616074 TCP10Q12799 353 aa25.84■■□□□ 1.73
TRAPPC3-208ENST00000616074 NFIAQ12857 509 aa25.84■■□□□ 1.73
TRAPPC3-208ENST00000616074 DENND2AQ9ULE3 1009 aa25.84■■□□□ 1.73
TRAPPC3-208ENST00000616074 ZSWIM8A7E2V4 1837 aa25.84■■□□□ 1.73
TRAPPC3-208ENST00000616074 SEMA3EO15041 775 aa25.83■■□□□ 1.73
TRAPPC3-208ENST00000616074 INPP5BP32019 993 aa25.83■■□□□ 1.73
TRAPPC3-208ENST00000616074 PPIL2Q13356 520 aa25.83■■□□□ 1.73
TRAPPC3-208ENST00000616074 PRPF38BQ5VTL8 546 aaKnown RBP25.83■■□□□ 1.73
TRAPPC3-208ENST00000616074 INTS3Q68E01 1043 aaKnown RBP25.83■■□□□ 1.73
TRAPPC3-208ENST00000616074 POTEFA5A3E0 1075 aa25.82■■□□□ 1.72
TRAPPC3-208ENST00000616074 SNAPC2Q13487 334 aa25.82■■□□□ 1.72
TRAPPC3-208ENST00000616074 CCDC102BQ68D86 513 aa25.82■■□□□ 1.72
TRAPPC3-208ENST00000616074 FAM198AQ9UFP1 575 aa25.82■■□□□ 1.72
TRAPPC3-208ENST00000616074 DOCK2Q92608 1830 aa25.81■■□□□ 1.72
TRAPPC3-208ENST00000616074 BTBD19C9JJ37 291 aa25.81■■□□□ 1.72
TRAPPC3-208ENST00000616074 ARHGAP45Q92619 1136 aa25.81■■□□□ 1.72
TRAPPC3-208ENST00000616074 ARMC5Q96C12 935 aa25.81■■□□□ 1.72
TRAPPC3-208ENST00000616074 USP40Q9NVE5 1235 aa25.81■■□□□ 1.72
TRAPPC3-208ENST00000616074 ZBTB22O15209 634 aa25.8■■□□□ 1.72
TRAPPC3-208ENST00000616074 PPATQ06203 517 aa25.8■■□□□ 1.72
TRAPPC3-208ENST00000616074 ZCCHC17Q9NP64 241 aaKnown RBP25.8■■□□□ 1.72
TRAPPC3-208ENST00000616074 ZNF112Q9UJU3 913 aa25.8■■□□□ 1.72
TRAPPC3-208ENST00000616074 TLR2O60603 784 aa25.79■■□□□ 1.72
TRAPPC3-208ENST00000616074 TIMM10P62072 90 aa25.79■■□□□ 1.72
TRAPPC3-208ENST00000616074 SRGAP3O43295 1099 aa25.78■■□□□ 1.72
TRAPPC3-208ENST00000616074 WDHD1O75717 1129 aaPredicted RBP25.78■■□□□ 1.72
TRAPPC3-208ENST00000616074 GNAI3P08754 354 aa25.78■■□□□ 1.72
TRAPPC3-208ENST00000616074 RASGRF1Q13972 1273 aa25.78■■□□□ 1.72
TRAPPC3-208ENST00000616074 ZFPM1Q8IX07 1006 aa25.78■■□□□ 1.72
TRAPPC3-208ENST00000616074 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.78■■□□□ 1.72
TRAPPC3-208ENST00000616074 KIAA0100Q14667 2235 aaKnown RBP25.78■■□□□ 1.72
TRAPPC3-208ENST00000616074 ARHGEF6Q15052 776 aa25.77■■□□□ 1.72
TRAPPC3-208ENST00000616074 ZGPATQ8N5A5 531 aaKnown RBP25.77■■□□□ 1.72
TRAPPC3-208ENST00000616074 PTCH2Q9Y6C5 1203 aa25.77■■□□□ 1.72
TRAPPC3-208ENST00000616074 A0A1B0GUL7 405 aa25.76■■□□□ 1.71
TRAPPC3-208ENST00000616074 TFCP2Q12800 502 aa25.76■■□□□ 1.71
TRAPPC3-208ENST00000616074 MTX1Q13505 466 aa25.76■■□□□ 1.71
TRAPPC3-208ENST00000616074 ARHGAP39Q9C0H5 1083 aa25.76■■□□□ 1.71
TRAPPC3-208ENST00000616074 TNNQ9UQP3 1299 aa25.76■■□□□ 1.71
TRAPPC3-208ENST00000616074 GAKO14976 1311 aa25.76■■□□□ 1.71
TRAPPC3-208ENST00000616074 RFX7Q2KHR2 1363 aa25.75■■□□□ 1.71
TRAPPC3-208ENST00000616074 ATRNL1Q5VV63 1379 aa25.75■■□□□ 1.71
TRAPPC3-208ENST00000616074 PDS5AQ29RF7 1337 aaKnown RBP25.75■■□□□ 1.71
TRAPPC3-208ENST00000616074 NOL9Q5SY16 702 aaKnown RBP25.75■■□□□ 1.71
TRAPPC3-208ENST00000616074 DZIP1Q86YF9 867 aaKnown RBP25.75■■□□□ 1.71
TRAPPC3-208ENST00000616074 XAGE2Q96GT9 111 aa25.75■■□□□ 1.71
TRAPPC3-208ENST00000616074 ABCF2Q9UG63 623 aa25.75■■□□□ 1.71
TRAPPC3-208ENST00000616074 KCNH4Q9UQ05 1017 aa25.75■■□□□ 1.71
TRAPPC3-208ENST00000616074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.75■■□□□ 1.71
TRAPPC3-208ENST00000616074 TRIM27P14373 513 aa25.74■■□□□ 1.71
TRAPPC3-208ENST00000616074 RGS3P49796 1198 aa25.74■■□□□ 1.71
TRAPPC3-208ENST00000616074 LACTBP83111 547 aaPredicted RBP25.74■■□□□ 1.71
TRAPPC3-208ENST00000616074 ZNF333Q96JL9 665 aa25.74■■□□□ 1.71
TRAPPC3-208ENST00000616074 IDI2Q9BXS1 227 aa25.74■■□□□ 1.71
TRAPPC3-208ENST00000616074 AKAP2Q9Y2D5 859 aa25.74■■□□□ 1.71
TRAPPC3-208ENST00000616074 ANKRD23Q86SG2 305 aa25.73■■□□□ 1.71
TRAPPC3-208ENST00000616074 ENTPD3O75355 529 aa25.72■■□□□ 1.71
TRAPPC3-208ENST00000616074 MOGSQ13724 837 aa25.72■■□□□ 1.71
TRAPPC3-208ENST00000616074 KIF22Q14807 665 aa25.72■■□□□ 1.71
TRAPPC3-208ENST00000616074 SLC9C1Q4G0N8 1177 aa25.72■■□□□ 1.71
TRAPPC3-208ENST00000616074 PDHXO00330 501 aa25.71■■□□□ 1.71
TRAPPC3-208ENST00000616074 IPO8O15397 1037 aaKnown RBP25.71■■□□□ 1.71
TRAPPC3-208ENST00000616074 BCAR3O75815 825 aa25.71■■□□□ 1.71
TRAPPC3-208ENST00000616074 EN2P19622 333 aaPredicted RBP25.71■■□□□ 1.71
TRAPPC3-208ENST00000616074 MVPQ14764 893 aaKnown RBP25.71■■□□□ 1.71
TRAPPC3-208ENST00000616074 C17orf99Q6UX52 265 aa25.71■■□□□ 1.71
TRAPPC3-208ENST00000616074 ATF7IPQ6VMQ6 1270 aa25.71■■□□□ 1.71
TRAPPC3-208ENST00000616074 SH3BP5LQ7L8J4 393 aa25.71■■□□□ 1.71
TRAPPC3-208ENST00000616074 FRAT1Q92837 279 aaPredicted RBP25.71■■□□□ 1.71
TRAPPC3-208ENST00000616074 PHF20L1A8MW92 1017 aa25.7■■□□□ 1.7
TRAPPC3-208ENST00000616074 BTDP43251 543 aa25.7■■□□□ 1.7
TRAPPC3-208ENST00000616074 SPTY2D1Q68D10 685 aaPredicted RBP25.7■■□□□ 1.7
TRAPPC3-208ENST00000616074 NBPF11Q86T75 865 aa25.7■■□□□ 1.7
TRAPPC3-208ENST00000616074 SLF2Q8IX21 1173 aa25.7■■□□□ 1.7
TRAPPC3-208ENST00000616074 FAM163AQ96GL9 167 aaPredicted RBP25.7■■□□□ 1.7
TRAPPC3-208ENST00000616074 NEUROD6Q96NK8 337 aa25.7■■□□□ 1.7
TRAPPC3-208ENST00000616074 DDX4Q9NQI0 724 aaKnown RBP25.7■■□□□ 1.7
TRAPPC3-208ENST00000616074 CPA4Q9UI42 421 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms