RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, human

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-223	ENST00000616010	IPO9	Q96P70	1041 aa	Known RBP	27.94	■■■□□ 2.06
CCND3-223	ENST00000616010	NAPB	Q9H115	298 aa		27.94	■■■□□ 2.06
CCND3-223	ENST00000616010	SCNN1D	P51172	638 aa		27.93	■■■□□ 2.06
CCND3-223	ENST00000616010	IMMT	Q16891	758 aa	Known RBP	27.93	■■■□□ 2.06
CCND3-223	ENST00000616010	JAKMIP1	Q96N16	626 aa	Known RBP	27.93	■■■□□ 2.06
CCND3-223	ENST00000616010	UPF3B	Q9BZI7	483 aa	Known RBP	27.93	■■■□□ 2.06
CCND3-223	ENST00000616010	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.93	■■■□□ 2.06
CCND3-223	ENST00000616010	NACAP1	Q9BZK3	213 aa		27.93	■■■□□ 2.06
CCND3-223	ENST00000616010	RPAP1	Q9BWH6	1393 aa	Predicted RBP	27.93	■■■□□ 2.06
CCND3-223	ENST00000616010	TDO2	P48775	406 aa		27.92	■■■□□ 2.06
CCND3-223	ENST00000616010	HAND2	P61296	217 aa		27.92	■■■□□ 2.06
CCND3-223	ENST00000616010	FAM163A	Q96GL9	167 aa	Predicted RBP	27.92	■■■□□ 2.06
CCND3-223	ENST00000616010	DAGLA	Q9Y4D2	1042 aa		27.92	■■■□□ 2.06
CCND3-223	ENST00000616010	PSMD14	O00487	310 aa		27.92	■■■□□ 2.06
CCND3-223	ENST00000616010	ALX1	Q15699	326 aa		27.92	■■■□□ 2.06
CCND3-223	ENST00000616010	TSGA10IP	Q3SY00	556 aa		27.92	■■■□□ 2.06
CCND3-223	ENST00000616010	BAZ2A	Q9UIF9	1905 aa	Known RBP	27.91	■■■□□ 2.06
CCND3-223	ENST00000616010	GPR75-ASB3	A0A0A6YYF3	556 aa		27.91	■■■□□ 2.06
CCND3-223	ENST00000616010	SOCS7	O14512	581 aa		27.91	■■■□□ 2.06
CCND3-223	ENST00000616010	CAST	P20810	708 aa	Known RBP	27.91	■■■□□ 2.06
CCND3-223	ENST00000616010	PRELP	P51888	382 aa		27.91	■■■□□ 2.06
CCND3-223	ENST00000616010	NEK4	P51957	841 aa		27.91	■■■□□ 2.06
CCND3-223	ENST00000616010	PPP4C	P60510	307 aa		27.91	■■■□□ 2.06
CCND3-223	ENST00000616010	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	27.91	■■■□□ 2.06
CCND3-223	ENST00000616010	CD2BP2	O95400	341 aa	Known RBP	27.9	■■■□□ 2.06
CCND3-223	ENST00000616010	KRT32	Q14532	448 aa		27.9	■■■□□ 2.06
CCND3-223	ENST00000616010	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.9	■■■□□ 2.06
CCND3-223	ENST00000616010	ARHGAP27	Q6ZUM4	889 aa		27.9	■■■□□ 2.06
CCND3-223	ENST00000616010	TEKT1	Q969V4	418 aa		27.9	■■■□□ 2.06
CCND3-223	ENST00000616010	MYO3B	Q8WXR4	1341 aa		27.89	■■■□□ 2.06
CCND3-223	ENST00000616010	CDK5RAP2	Q96SN8	1893 aa		27.89	■■■□□ 2.06
CCND3-223	ENST00000616010	ZNF213	O14771	459 aa		27.89	■■■□□ 2.06
CCND3-223	ENST00000616010	ST18	O60284	1047 aa		27.89	■■■□□ 2.05
CCND3-223	ENST00000616010	VIL1	P09327	827 aa	Known RBP	27.89	■■■□□ 2.05
CCND3-223	ENST00000616010	BECN1	Q14457	450 aa		27.89	■■■□□ 2.05
CCND3-223	ENST00000616010	STOX1	Q6ZVD7	989 aa		27.89	■■■□□ 2.05
CCND3-223	ENST00000616010	CERS3	Q8IU89	383 aa		27.89	■■■□□ 2.05
CCND3-223	ENST00000616010	TBC1D2	Q9BYX2	928 aa		27.89	■■■□□ 2.05
CCND3-223	ENST00000616010	TM6SF1	Q9BZW5	370 aa		27.88	■■■□□ 2.05
CCND3-223	ENST00000616010	CPA1	P15085	419 aa		27.87	■■■□□ 2.05
CCND3-223	ENST00000616010	PSMA5	P28066	241 aa		27.87	■■■□□ 2.05
CCND3-223	ENST00000616010	CRK	P46108	304 aa		27.87	■■■□□ 2.05
CCND3-223	ENST00000616010	CXCL9	Q07325	125 aa		27.87	■■■□□ 2.05
CCND3-223	ENST00000616010	HHIPL2	Q6UWX4	724 aa		27.87	■■■□□ 2.05
CCND3-223	ENST00000616010	HSCB	Q8IWL3	235 aa		27.87	■■■□□ 2.05
CCND3-223	ENST00000616010	SNX21	Q969T3	373 aa		27.87	■■■□□ 2.05
CCND3-223	ENST00000616010	NAV1	Q8NEY1	1877 aa		27.87	■■■□□ 2.05
CCND3-223	ENST00000616010		E7EWF7	191 aa		27.86	■■■□□ 2.05
CCND3-223	ENST00000616010	PLCG2	P16885	1265 aa		27.86	■■■□□ 2.05
CCND3-223	ENST00000616010	YBX3	P16989	372 aa	Known RBP eCLIP	27.86	■■■□□ 2.05	1e-6	■□□□□ 11
CCND3-223	ENST00000616010	NBPF3	Q9H094	633 aa		27.86	■■■□□ 2.05
CCND3-223	ENST00000616010	ZSWIM6	Q9HCJ5	1215 aa		27.86	■■■□□ 2.05
CCND3-223	ENST00000616010	DCP1A	Q9NPI6	582 aa	Predicted RBP	27.86	■■■□□ 2.05
CCND3-223	ENST00000616010	TIAM2	Q8IVF5	1701 aa		27.86	■■■□□ 2.05
CCND3-223	ENST00000616010	LAMB1	P07942	1786 aa		27.86	■■■□□ 2.05
CCND3-223	ENST00000616010	USP5	P45974	858 aa		27.85	■■■□□ 2.05
CCND3-223	ENST00000616010	COL9A3	Q14050	684 aa	Predicted RBP	27.85	■■■□□ 2.05
CCND3-223	ENST00000616010	CIAPIN1	Q6FI81	312 aa		27.85	■■■□□ 2.05
CCND3-223	ENST00000616010	GIMAP6	Q6P9H5	292 aa		27.85	■■■□□ 2.05
CCND3-223	ENST00000616010	ATP8A2	Q9NTI2	1148 aa		27.85	■■■□□ 2.05
CCND3-223	ENST00000616010	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.85	■■■□□ 2.05
CCND3-223	ENST00000616010	RHBDL3	P58872	404 aa		27.85	■■■□□ 2.05
CCND3-223	ENST00000616010	NEK1	Q96PY6	1258 aa		27.85	■■■□□ 2.05
CCND3-223	ENST00000616010	CYP46A1	Q9Y6A2	500 aa		27.85	■■■□□ 2.05
CCND3-223	ENST00000616010	SLC4A3	P48751	1232 aa		27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	HDLBP	Q00341	1268 aa	Known RBP	27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	BLOC1S2	Q6QNY1	142 aa		27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	RUFY3	Q7L099	469 aa		27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	TBC1D10C	Q8IV04	446 aa		27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	TEX11	Q8IYF3	940 aa		27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	FOCAD	Q5VW36	1801 aa		27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	RBM5	P52756	815 aa	Known RBP eCLIP	27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	TGFBRAP1	Q8WUH2	860 aa		27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	ZDHHC15	Q96MV8	337 aa		27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	SERPINA10	Q9UK55	444 aa		27.84	■■■□□ 2.05
CCND3-223	ENST00000616010	DICER1	Q9UPY3	1922 aa	Known RBP	27.83	■■■□□ 2.05
CCND3-223	ENST00000616010	SBF1	O95248	1867 aa		27.83	■■■□□ 2.05
CCND3-223	ENST00000616010	GML	Q99445	158 aa		27.83	■■■□□ 2.05
CCND3-223	ENST00000616010	MRI	Q9BWK5	157 aa		27.83	■■■□□ 2.05
CCND3-223	ENST00000616010	DAXX	Q9UER7	740 aa	Predicted RBP	27.83	■■■□□ 2.05
CCND3-223	ENST00000616010	PCDHAC2	Q9Y5I4	1007 aa		27.83	■■■□□ 2.05
CCND3-223	ENST00000616010	APOBEC3H	Q6NTF7	200 aa	Known RBP	27.82	■■■□□ 2.04
CCND3-223	ENST00000616010	ECM29	Q5VYK3	1845 aa		27.82	■■■□□ 2.04
CCND3-223	ENST00000616010	MINDY4B	A8MYZ0	360 aa		27.82	■■■□□ 2.04
CCND3-223	ENST00000616010	LMNB1	P20700	586 aa		27.82	■■■□□ 2.04
CCND3-223	ENST00000616010	CTDSPL2	Q05D32	466 aa		27.82	■■■□□ 2.04
CCND3-223	ENST00000616010	PPARA	Q07869	468 aa		27.82	■■■□□ 2.04
CCND3-223	ENST00000616010	DDX60L	Q5H9U9	1706 aa	Known RBP	27.82	■■■□□ 2.04
CCND3-223	ENST00000616010	FZD9	O00144	591 aa		27.81	■■■□□ 2.04
CCND3-223	ENST00000616010	TNIP1	Q15025	636 aa		27.81	■■■□□ 2.04
CCND3-223	ENST00000616010	CTR9	Q6PD62	1173 aa		27.81	■■■□□ 2.04
CCND3-223	ENST00000616010	MAPKAPK5	Q8IW41	473 aa		27.81	■■■□□ 2.04
CCND3-223	ENST00000616010	AGBL3	Q8NEM8	1001 aa		27.81	■■■□□ 2.04
CCND3-223	ENST00000616010	TTC14	Q96N46	770 aa		27.81	■■■□□ 2.04
CCND3-223	ENST00000616010	MKRN1	Q9UHC7	482 aa	Known RBP	27.81	■■■□□ 2.04
CCND3-223	ENST00000616010	CYP2D7	A0A087X1C5	515 aa		27.8	■■■□□ 2.04
CCND3-223	ENST00000616010	USP17L12	C9JPN9	530 aa		27.8	■■■□□ 2.04
CCND3-223	ENST00000616010	USP17L21	D6R901	530 aa		27.8	■■■□□ 2.04
CCND3-223	ENST00000616010	RPS6KB1	P23443	525 aa		27.8	■■■□□ 2.04
CCND3-223	ENST00000616010	EIF6	P56537	245 aa	Known RBP	27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms