RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 HNRNPCP07910 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 TSGA10Q9BZW7 698 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 CAPN9O14815 690 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 UBE2HP62256 183 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 CLUL1Q15846 466 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 EVI5LQ96CN4 794 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 ZSCAN16Q9H4T2 348 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 MBD5Q9P267 1494 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 CCDC15Q0P6D6 951 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 LMBR1Q8WVP7 490 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 C20orf194Q5TEA3 1177 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.37□□□□□ -0.75
COL12A1-211ENST00000615798 DNAI1Q9UI46 699 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 CASTP20810 708 aaKnown RBP10.37□□□□□ -0.75
COL12A1-211ENST00000615798 DEUP1Q05D60 604 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 CACYBPQ9HB71 228 aaKnown RBP10.37□□□□□ -0.75
COL12A1-211ENST00000615798 ZMYND8Q9ULU4 1186 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-211ENST00000615798 AOX1Q06278 1338 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 NBPF10Q6P3W6 841 aaKnown RBP10.37□□□□□ -0.75
COL12A1-211ENST00000615798 KIF2CQ99661 725 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 MRPL28Q13084 256 aaKnown RBP10.37□□□□□ -0.75
COL12A1-211ENST00000615798 ATP6V0A1Q93050 837 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 SDCCAG3Q96C92 435 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 DBF4Q9UBU7 674 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-211ENST00000615798 LAMC1P11047 1609 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 TRHP20396 242 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-211ENST00000615798 WASHC4Q2M389 1173 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 KIF6Q6ZMV9 814 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 ARMC2Q8NEN0 867 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 UBAC1Q9BSL1 405 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 TBC1D5Q92609 795 aa10.37□□□□□ -0.75
COL12A1-211ENST00000615798 TTC41PQ6P2S7 1318 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 SLC4A1P02730 911 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 EFCAB13Q8IY85 973 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 CABS1Q96KC9 395 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 NBPF3Q9H094 633 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 RAD50Q92878 1312 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 ST13P4Q8IZP2 240 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-211ENST00000615798 FRMD4BQ9Y2L6 1034 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 WDR46O15213 610 aaKnown RBP10.36□□□□□ -0.75
COL12A1-211ENST00000615798 TDRD12Q587J7 1177 aaKnown RBP10.36□□□□□ -0.75
COL12A1-211ENST00000615798 ATL3Q6DD88 541 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 PDZD8Q8NEN9 1154 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 UBLCP1Q8WVY7 318 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-211ENST00000615798 KIFC3Q9BVG8 833 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 HPDP32754 393 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-211ENST00000615798 MTIF2P46199 727 aaKnown RBP10.36□□□□□ -0.75
COL12A1-211ENST00000615798 IFT81Q8WYA0 676 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 CCDC124Q96CT7 223 aaKnown RBP10.36□□□□□ -0.75
COL12A1-211ENST00000615798 TXNDC16Q9P2K2 825 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 POLE2P56282 527 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 STK38LQ9Y2H1 464 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 ZKSCAN5Q9Y2L8 839 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 MIS18AQ9NYP9 233 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 RUFY4Q6ZNE9 571 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 TBC1D9Q6ZT07 1266 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 MED4Q9NPJ6 270 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 ANKRD44Q8N8A2 993 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 ANKRD20A4Q4UJ75 823 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 ANKRD20A8PQ5CZ79 823 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 ANKRD20A2Q5SQ80 823 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 ANKRD20A1Q5TYW2 823 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 MCTP2Q6DN12 878 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 SPZ1Q9BXG8 430 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 JRKLQ9Y4A0 524 aa10.36□□□□□ -0.75
COL12A1-211ENST00000615798 EVI5O60447 810 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 ICE2Q659A1 982 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 ANLNQ9NQW6 1124 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 ABCC1P33527 1531 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 PPFIA4O75335 1185 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 MRPS15P82914 257 aaKnown RBP10.35□□□□□ -0.75
COL12A1-211ENST00000615798 PPP2R3AQ06190 1150 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 GPR161Q8N6U8 529 aaKnown RBP10.35□□□□□ -0.75
COL12A1-211ENST00000615798 PDXDC1Q6P996 788 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.35□□□□□ -0.75
COL12A1-211ENST00000615798 CHCHD3Q9NX63 227 aaKnown RBP10.35□□□□□ -0.75
COL12A1-211ENST00000615798 STMN3Q9NZ72 180 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 ANGPTL3Q9Y5C1 460 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 ORC6Q9Y5N6 252 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 IQGAP3Q86VI3 1631 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 BAG2O95816 211 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 TNNC1P63316 161 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 NEO1Q92859 1461 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 MAGI3Q5TCQ9 1506 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 KIF1BO60333 1816 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 PHACTR2O75167 634 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 TROVE2P10155 538 aaKnown RBP eCLIP10.35□□□□□ -0.75
COL12A1-211ENST00000615798 SESN1Q9Y6P5 492 aa10.35□□□□□ -0.75
COL12A1-211ENST00000615798 BAG4O95429 457 aaKnown RBP10.35□□□□□ -0.75
COL12A1-211ENST00000615798 ZNF530Q6P9A1 599 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-211ENST00000615798 LRSAM1Q6UWE0 723 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 ASXL2Q76L83 1435 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 NEUROD6Q96NK8 337 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 ZNF513Q8N8E2 541 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-211ENST00000615798 NPATQ14207 1427 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 FMNL1O95466 1100 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-211ENST00000615798 EVA1CP58658 441 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 CYB5RLQ6IPT4 315 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 SYNCQ9H7C4 482 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms