RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
PRKN-211ENST00000615065 CDC42EP5Q6NZY7 148 aa18.38■□□□□ 0.53
PRKN-211ENST00000615065 MS4A4AQ96JQ5 239 aa18.38■□□□□ 0.53
PRKN-211ENST00000615065 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.38■□□□□ 0.53
PRKN-211ENST00000615065 A0A1B0GUL7 405 aa18.37■□□□□ 0.53
PRKN-211ENST00000615065 GNAI2P04899 355 aa18.37■□□□□ 0.53
PRKN-211ENST00000615065 CRHR2Q13324 411 aa18.37■□□□□ 0.53
PRKN-211ENST00000615065 RASGRF1Q13972 1273 aa18.37■□□□□ 0.53
PRKN-211ENST00000615065 TMEM57Q8N5G2 664 aa18.37■□□□□ 0.53
PRKN-211ENST00000615065 OTUD5Q96G74 571 aa18.37■□□□□ 0.53
PRKN-211ENST00000615065 WRNIP1Q96S55 665 aa18.37■□□□□ 0.53
PRKN-211ENST00000615065 SNCAIPQ9Y6H5 919 aa18.37■□□□□ 0.53
PRKN-211ENST00000615065 PNMA6EA0A0J9YXQ4 647 aa18.36■□□□□ 0.53
PRKN-211ENST00000615065 ZBTB22O15209 634 aa18.36■□□□□ 0.53
PRKN-211ENST00000615065 TCP10Q12799 353 aa18.36■□□□□ 0.53
PRKN-211ENST00000615065 NFIAQ12857 509 aa18.36■□□□□ 0.53
PRKN-211ENST00000615065 OTUD7BQ6GQQ9 843 aa18.36■□□□□ 0.53
PRKN-211ENST00000615065 BRI3BPQ8WY22 251 aa18.36■□□□□ 0.53
PRKN-211ENST00000615065 DOCK2Q92608 1830 aa18.36■□□□□ 0.53
PRKN-211ENST00000615065 ZKSCAN4Q969J2 545 aaPredicted RBP18.36■□□□□ 0.53
PRKN-211ENST00000615065 XAGE2Q96GT9 111 aa18.36■□□□□ 0.53
PRKN-211ENST00000615065 AKAP2Q9Y2D5 859 aa18.36■□□□□ 0.53
PRKN-211ENST00000615065 SPDYE5A6NIY4 337 aa18.35■□□□□ 0.53
PRKN-211ENST00000615065 ZKSCAN2Q63HK3 967 aa18.35■□□□□ 0.53
PRKN-211ENST00000615065 FBXO46Q6PJ61 603 aaPredicted RBP18.35■□□□□ 0.53
PRKN-211ENST00000615065 MIGA2Q7L4E1 593 aa18.35■□□□□ 0.53
PRKN-211ENST00000615065 ZGPATQ8N5A5 531 aaKnown RBP18.35■□□□□ 0.53
PRKN-211ENST00000615065 FAM151AQ8WW52 585 aa18.35■□□□□ 0.53
PRKN-211ENST00000615065 HOOK2Q96ED9 719 aa18.35■□□□□ 0.53
PRKN-211ENST00000615065 PDS5AQ29RF7 1337 aaKnown RBP18.34■□□□□ 0.53
PRKN-211ENST00000615065 CCL15-CCL14A0A0B4J2E2 113 aa18.34■□□□□ 0.53
PRKN-211ENST00000615065 GTF2A2P52657 109 aa18.34■□□□□ 0.53
PRKN-211ENST00000615065 CCL15Q16663 113 aa18.34■□□□□ 0.53
PRKN-211ENST00000615065 DCAF15Q66K64 600 aa18.34■□□□□ 0.53
PRKN-211ENST00000615065 USP40Q9NVE5 1235 aa18.34■□□□□ 0.53
PRKN-211ENST00000615065 FAM198AQ9UFP1 575 aa18.34■□□□□ 0.53
PRKN-211ENST00000615065 TNRC18O15417 2968 aaPredicted RBP18.33■□□□□ 0.53
PRKN-211ENST00000615065 GAKO14976 1311 aa18.33■□□□□ 0.53
PRKN-211ENST00000615065 INPP5BP32019 993 aa18.33■□□□□ 0.52
PRKN-211ENST00000615065 MVPQ14764 893 aaKnown RBP18.33■□□□□ 0.52
PRKN-211ENST00000615065 ERO1BQ86YB8 467 aa18.33■□□□□ 0.52
PRKN-211ENST00000615065 NEUROD6Q96NK8 337 aa18.33■□□□□ 0.52
PRKN-211ENST00000615065 ZNF341Q9BYN7 854 aa18.33■□□□□ 0.52
PRKN-211ENST00000615065 ABCF2Q9UG63 623 aa18.33■□□□□ 0.52
PRKN-211ENST00000615065 OTOP1Q7RTM1 612 aa18.32■□□□□ 0.52
PRKN-211ENST00000615065 DZIP1Q86YF9 867 aaKnown RBP18.32■□□□□ 0.52
PRKN-211ENST00000615065 ZFPM1Q8IX07 1006 aa18.32■□□□□ 0.52
PRKN-211ENST00000615065 FAM43AQ8N2R8 423 aa18.32■□□□□ 0.52
PRKN-211ENST00000615065 CD99L2Q8TCZ2 262 aa18.32■□□□□ 0.52
PRKN-211ENST00000615065 TRIM17Q9Y577 477 aa18.32■□□□□ 0.52
PRKN-211ENST00000615065 RFX7Q2KHR2 1363 aa18.31■□□□□ 0.52
PRKN-211ENST00000615065 IRF6O14896 467 aa18.31■□□□□ 0.52
PRKN-211ENST00000615065 G3BP1Q13283 466 aaKnown RBP eCLIP18.31■□□□□ 0.52
PRKN-211ENST00000615065 TAF1CQ15572 869 aaPredicted RBP18.31■□□□□ 0.52
PRKN-211ENST00000615065 PI16Q6UXB8 463 aa18.31■□□□□ 0.52
PRKN-211ENST00000615065 HTTP42858 3142 aa18.31■□□□□ 0.52
PRKN-211ENST00000615065 CAP1Q01518 475 aa18.3■□□□□ 0.52
PRKN-211ENST00000615065 PPIL2Q13356 520 aa18.3■□□□□ 0.52
PRKN-211ENST00000615065 SPTY2D1Q68D10 685 aaPredicted RBP18.3■□□□□ 0.52
PRKN-211ENST00000615065 ERO1AQ96HE7 468 aa18.3■□□□□ 0.52
PRKN-211ENST00000615065 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
PRKN-211ENST00000615065 HMG20BQ9P0W2 317 aa18.3■□□□□ 0.52
PRKN-211ENST00000615065 ZNF112Q9UJU3 913 aa18.3■□□□□ 0.52
PRKN-211ENST00000615065 MROH7-TTC4A0A0A0MT08 1334 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 ZSWIM8A7E2V4 1837 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 CETPP11597 493 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 RLBP1P12271 317 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 RGS3P49796 1198 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 SP3Q02447 781 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 MECOMQ03112 1051 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 SNAPC2Q13487 334 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 POLA2Q14181 598 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 GORABQ5T7V8 394 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 FTSJ3Q8IY81 847 aaKnown RBP18.29■□□□□ 0.52
PRKN-211ENST00000615065 ZNF384Q8TF68 577 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 IDI2Q9BXS1 227 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 ATRNL1Q5VV63 1379 aa18.29■□□□□ 0.52
PRKN-211ENST00000615065 BTBD19C9JJ37 291 aa18.28■□□□□ 0.52
PRKN-211ENST00000615065 ARID4AP29374 1257 aaPredicted RBP18.28■□□□□ 0.52
PRKN-211ENST00000615065 BTDP43251 543 aa18.28■□□□□ 0.52
PRKN-211ENST00000615065 ERICH6Q7L0X2 663 aa18.28■□□□□ 0.52
PRKN-211ENST00000615065 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
PRKN-211ENST00000615065 SLF2Q8IX21 1173 aa18.28■□□□□ 0.52
PRKN-211ENST00000615065 SPATA5Q8NB90 893 aa18.28■□□□□ 0.52
PRKN-211ENST00000615065 FAM163AQ96GL9 167 aaPredicted RBP18.28■□□□□ 0.52
PRKN-211ENST00000615065 ZFYVE28Q9HCC9 887 aa18.28■□□□□ 0.52
PRKN-211ENST00000615065 DDX4Q9NQI0 724 aaKnown RBP18.28■□□□□ 0.52
PRKN-211ENST00000615065 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.52
PRKN-211ENST00000615065 ENTPD3O75355 529 aa18.27■□□□□ 0.52
PRKN-211ENST00000615065 WDHD1O75717 1129 aaPredicted RBP18.27■□□□□ 0.52
PRKN-211ENST00000615065 MCAMP43121 646 aa18.27■□□□□ 0.52
PRKN-211ENST00000615065 PPATQ06203 517 aa18.27■□□□□ 0.52
PRKN-211ENST00000615065 TBC1D9Q6ZT07 1266 aa18.27■□□□□ 0.52
PRKN-211ENST00000615065 SH3BP5LQ7L8J4 393 aa18.27■□□□□ 0.52
PRKN-211ENST00000615065 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.27■□□□□ 0.52
PRKN-211ENST00000615065 SSH3Q8TE77 659 aa18.27■□□□□ 0.52
PRKN-211ENST00000615065 EFCC1Q9HA90 598 aa18.27■□□□□ 0.52
PRKN-211ENST00000615065 MAST2Q6P0Q8 1798 aa18.27■□□□□ 0.51
PRKN-211ENST00000615065 MYO5AQ9Y4I1 1855 aaKnown RBP18.26■□□□□ 0.51
PRKN-211ENST00000615065 ATP8B2P98198 1209 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms